LOC120555425


Basic Information

Item Value
gene id LOC120555425
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 4333065 ~ 4341288 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039794111.1
ACATAACAGCAAATGTACAAgtccctaaaaaaaacaacaacagctcaGTGGATATTAGCAGTGAGGCACATAATACCATAAAGTACGATAAGGCGCGCGCTCTCGTTATGGACGCCAGCTTTTCTTTCTGCCTTGACAGCAACAAAGACGAACACGATTTGCGTCAACGGTACATTTAGAAACCTCACCCTCCTCTACAGCAGCGGCAGAAGTTTAAGACTCTTCACTCTCCGGCCTCCAGAAAAGATCAAGATAATGACTCCAACGCCGGCAAAACCAGCTACGGCACGGTGGAGGATGTCAAAGATTGGAGGAGCAAAAGGAAGGCCAGCACTGATAAGGGGTCTTCCAAGAAAAATCTAAGGGCCGATGGTGTTGCCTACGCCAGTTCCTCTCACAGTGTTATATCAGGGGGCGCCAGTGTGAGGGGGAGCAAGTGGAAAACAGACACTAATGAAGACTGCCCCAAGAAAAAGATAAGGGGTAGCAATGATGCCAACACCAATGAGCCCAGCATTGTGTTTATTAAGGGTAGCCATGTGAGGCAGAGTGAAAGGAAGGCCCACAATGACAAGTTCCTCAAAGATGCAGCGCTCTGACCTCAGCCTGAGCAGCAGCATATGTTCATCCTCAGATGAGGATAATATATATGGCATCCCCTTCTCAGTAAAAACCAGCAGAGCTGAATTTGAAGCCAACTATATTGAGATTTACAAGATTGCTAAAGGTGGTTTTGGAGCCGTATATGCAGGCTACCGAAAAGAAGACGTTGCATCAGTTGCTATCaaacatattccaaaagaaaagGTCGAGTACAGTAAAGTGGTCAAGAATGGAAAGGTGTATAAGGTCATTGATGAAGTCGCCCTTATGGTGAAAGCAGCAGGTGGAGCTGAATCACCTGGGAGATCTGCAGCCATCTCCCTACTTGACTGTTACGATCTGGAGGAGGACCTTCTCCTGATTATGGAAAGGCCAGTCCCCTCCATGGATCTCCACCAGTATCGCAATGCCAAAAGAGGCTTCCTGCTGGAAGACGAGGCTAAGACCATCCTAAGGCAGATGGTGGATGCAGCCATCgagatgcacacaaatggagtCTTTCACAGGGACATCAAGTTAGAAAACACCCTCATTGAAACTGGATCACATGTCCAGTTGCGCGCTCGTGTGATTGATTTTGGCTGTGGTAGCCTCGTGATAAAGGGATATTACTATCACTACTCTGGTACCTTATCAAAAGCCCCTCCAGAATGGTTCATGTTCAAAAGATACAAAGCCAGTCCCACAACAGTGTGGCAGCTGGGAGCACTGTTGTACGACCTGCTGGATCATGAATATTCCTTTAAAACACGTATTTACCTTGAAAGAGGGCTGAAAATCAACTGTAATCTGTCCATAGACTGCCAAGAATTCTTGCACATGTGTCTGGTCAGCAACCCTTACAGGCGTCCCAGCTTAGAGCAGCTACAGCTCCATCCCTGGCTCAGATAGTCCATGCCACACCACCTGCTCATTTTCCAAATGTGTCCTAGGTATTATCCAGGAAGAGGAACTGGAGGGAACTCAAACAAGTCCAAATCAATAAAATGGTTTGATGAATCAATGGCAGTCTACCCATTGATTATGATATCATATTTTAACTTTTACTGTTGTtgtaattgccactgttcatcatgtcATAACATTATACCCACTGCTTTAAATATtgcggaatttccggtggcaacggagcaatcccggaagtggaacattgtggatatagactagatatgtctgtctctctccctcccaacTGGTCGGTCgaggcagatggccgcccattTGGAGCCACGTTCGGTCTAGACATAATCTgtttgtaaagtgtcctgagataacttctcttatgatttgacactatgaatGAAATTGGATTAAATATGCACAAAGAAGCAGTCGTTGGCAATACAAATCTAAACTCTCAGGCTCCCTTGAGCAATGCTAATACAActaaatatgtataaaaatgaaaaagatcactcaagtaaaaacaaaatgagaatCTTAAGATAAAACAGGCGAACTGGTTTTGTCATAGCGAGTTCCCATGGAAACTGCAGACATTGTGCTTTGTTAATTATGTTGTCAATTTGCCTATTCCCTTTTCACATCCGTATAAACACAACCCTTACCactacacaaaaaaacagacagaaaacaggtcAAGTGGGAGAATGCTCAGGGCATTCAACTGGAAAAGGCTAACATGAAAGACCTGGAGATTATCAAAGagatttaagaaaataaattggCTCGACTCTCGTCGGAAAGAAGGATTGTTGGAAAAGAAAACAGATTGTTTAATGGCCATACTCTCTGACTCTGACCCCTTTAGTTTGTGGATCATTTCCTTGTGGGAACACTTGCACACAGTCCAAATGTGTCCTTTTATCCTCCCTTCCcccttcttttcatttcactaaGTCTTGTCATCCCAAGCACGGGAGTGAGACTGCAGGAAAATGGCCCATTAAATAGAACCCTCGTCTCTCCCAGTGTGCCCAATCGGCCTCTCTTTAACCAGCATGGGATCAAAAATCCTCTTCCTTTTTCACTCACTGTAACACAAAACAAGGTTCATAGAGCAAGGCAATCTTGGAATTAACCATTAAACAAGTCAAAAAGCACAACCTTGTCCCTTGAACTGATTCTAGAATATCTCAAGCTACTTACCCTCGGTTCTTTCTTTTTCGCCTTGATCGTCACTTTCATGCTGGTCCCTTAAATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039794111.1 True 2767 mRNA 0.44 10 4333065 4341288

Neighbor

gene id symbol gene type direction distance location
LOC120555911 LOC102783822,LOC103462246,LOC106925612,LOC102294465 coding upstream 78991 4163676 ~ 4254074 (+)
LOC120556182 LOC101467318,LOC102294465,LOC102206054,LOC108237897 coding upstream 181001 3873032 ~ 4152064 (+)
mtss1lb LOC102779958,LOC108237900,LOC103462242,LOC103355402 coding upstream 608922 3623634 ~ 3724143 (+)
LOC120555909 NA coding upstream 910659 3421203 ~ 3422406 (+)
slc7a6 slc7a6,LOC104919890,LOC103355407,LOC102782072 coding upstream 1027577 3280076 ~ 3305488 (+)
zgc:162297 LOC103355515 coding downstream 1300995 5642283 ~ 5654255 (+)
LOC120555666 LOC104921432,LOC104957830,LOC107086796,LOC103149206,LOC102794467,LOC102201791,LOC101480916,LOC102288651 coding downstream 1318192 5659480 ~ 5672023 (+)
LOC120556426 LOC102314239,LOC100696141,LOC102210596,LOC101484460,LOC106959120,LOC106925763,LOC103462259 coding downstream 1392002 5733290 ~ 5758249 (+)
LOC120556427 cd81,LOC103358449,LOC103379030 coding downstream 1423255 5764543 ~ 5804822 (+)
LOC120555999 NA coding downstream 1474746 5816034 ~ 5854489 (+)
G25436 NA non-coding upstream 516917 3815837 ~ 3816148 (+)
G25418 NA non-coding upstream 718549 3614246 ~ 3614516 (+)
G25380 NA non-coding upstream 869542 3463057 ~ 3463523 (+)
LOC120555487 NA non-coding upstream 918530 3413012 ~ 3414535 (+)
LOC120555486 NA non-coding upstream 943340 3388522 ~ 3389725 (+)
G25486 NA non-coding downstream 4350 4345638 ~ 4348769 (+)
G25498 NA non-coding downstream 105307 4446595 ~ 4446914 (+)
G25541 NA non-coding downstream 340836 4682124 ~ 4682470 (+)
G25567 NA non-coding downstream 549439 4890727 ~ 4890996 (+)
G25593 NA non-coding downstream 1289376 5630664 ~ 5633030 (+)
G25431 NA other upstream 547523 3784933 ~ 3785542 (+)
mmp15b mmp15,LOC104948393 other upstream 814979 3481297 ~ 3518086 (+)
adamts18 adamts18 other upstream 2020908 2240414 ~ 2312157 (+)
G25204 NA other upstream 2249746 2081958 ~ 2083319 (+)
G25173 dnaja2,LOC106524269 other upstream 2490254 1839333 ~ 1842811 (+)
G25512 NA other downstream 229085 4570373 ~ 4575645 (+)
tshz3b tshz3 other downstream 452527 4793815 ~ 4837285 (+)
G25708 NA other downstream 1692921 6034209 ~ 6035193 (+)
LOC120555541 NA other downstream 1921122 6262410 ~ 6289776 (+)
G25743 NA other downstream 1945760 6287048 ~ 6288077 (+)

Expression


Co-expression Network