adamtsl5 (adamtsl5)


Basic Information

Item Value
gene id adamtsl5
gene name adamtsl5
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 41063040 ~ 41115545 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039794130.1
agcacAGCGTTCACACAGCAGCCAGGGACGGTGGACTATAGTGGAGTGCTGCCGGCTCTCTGCGCTCTTTTATCGGGCTTTTCTTCCGAACATTGGACCGGTTCGGATTGACAGGAAAGCCATAAAGAGAAGAAACAACTACTGGAGCTGAGCAAGGAGTGCTCTAACCGTGCAGGACCGGGCACAAGTGAGATCACCTGCCTGGGCGCGATAAGACTTTaaggacaaaaacaaaagtagaTGGAATAATGTGAATCACAGCTATTGCGTTTTAATGTAAAGAAGGAACaggaaaagggaactccccgtgaagacttcacttttttttttctgcacctgAACGTTGAGCAGAGGATGCGCCTTTTTTTCCAAACTTTTACGCGTGTCCCGAAAGACAACTCAATCTGATGTGATGTGTTTTGGGAACTGAGTCACAGCTGTTTGGATAGACGAGCTCTGCagctgagagaaagagaaaaacaaagttcCTTAAAAgtttccccttttaaaaaaaaaaaaaaaaaattaaaaaaagaaggattGAACCCCAGCAGAGAGTTGGATATGGATGGTGTTGCGTCCGGAATCCGTGTCTCGGAGCCCGCAGCTGGGATGCACTGCGCATCTGAGCCGCGACGTTTCACACCATGATGCGGGACCAAAACTGCACCTGACCACGAAAAACCTGAATCCAATCCACGAGGATCTACCATGTCCTCACTACTGACGAGGAAGCTGACTCTGTGCCAGGCCCTGACCTTTGTCCTGCTGCTGGTCGCTCCCGCCTGCCTGTCGTCCTCTCAGAGTTCCTGGGTTTCTGCATGGCATCCCTCCGGCGAGGCCTCATCAGGGCGTCCGGCACGCGCCCGGCGGCAGCTGCACTTCAGGAACGAGTGGGCGACGTGGAGCGGCTGGTCTGTCTGCTCTCGTAGCTGTGGGAGCGGAGCCTCGGTGAGGAAGCGCACCTGCATCACCAGGAACCCAGTGGGCGGGCCGTGTACAGGAGATCCCAGACAATACAAGATCTGCAACACTAAGgaGTGTCCCGCCAGCTCGGAGGATTTCAGAGAGATGCAGTGTGCTGCCTTCAATGACAGACCGTTAGTGGCTGGAAACACCTTCAGATGGACCACCTTTCATGGAGGCTCTAACCCCTGTGAACTGAGCTGCCTGGCCCTGGGCCACAACTTCTACTACAACTTTGGCCGTGTGCTCGACGGCACAGCCTGCAACAAGGAGCCTGGAGCGGTGTGTGTCAACGGACAGTGCCTGAAGCCCGGCTGTGACTCCATCTTTGGATCAAAGCAGCAGGAGGACGCCTGCATGGTGTGTGGAGGACAAAACACCACCTGCCTGCACCACAAGAGCGTGTACCAGAGCAACGGTCTGGAGGCAGGGGGACCTTTTGGATACAACGAAGTGGCCATGATTCCAGCTGGAGCCACTCACATCCGAGTCACTGATAACAGCAGGAATTATCTAGCCCTCCAGAACGGTCGCTCCCAGTTTGTGATCAACGGTAACTGGAAGATAAGCATTCCAGGCGAGTACAATGTAGCCGGGACGAAGCTGCTGTACCGGCGCTCTGCAGACACCTGGGAGAGCTTCGAGGTACCAGGACCCACCCAGGAAGACCTCCATCTAATGGTGCTGGCGACAGACAGAAACCCGGGCATCGAGTATGAGTACTGGCTGCCCCCAGGCCAGTACGCCCTCCACCATGGGGGGAGGAGTCCACTGCGCCAAGCTCACCACACTGCCAACTACCTCCCCTGGGATCAACCCACCACCACAACCGCTACCAccacaaccaccaccaccacccggCCTCCTCCTGTCACCACCCAACCCCACTGGTATTTAAGGCCTGTGAAGCCGCCCCGCCAATCTCCCCAGCACAACCGCCGCCAGCCCAGCCTGCCCCGCCTGGAGCGGCGGGAGGAGAACCACAGAAACCTCCTGCCTCAGCCTTCACCTGGAAGGCATTGTGGGAAATGTCGGCGAGTTAAAGGGCGAAGGGAACGCCACAGACAGTATTGCCAGAAGGACTTTGTTTTCCGGGCCCGAGTCCTCGGGAAGCTGTACAGAGGCGAGGAGACGCGTTATGACGTCCAGATCATCCACACGTACCGGAACAGCTTCCGCCTGGAGCACCGCGAGTTCTTGTGGGTCCCTAATGTGTGTGACTGCCCCCACCTGGAGGAGGGAAGACAGTATATACTGATGGTGCGTCGCCACATTAACTATGAGCACACGCTGAACCGCATCCTGCTGGACGAGGAGAGCTACGCGGTACCGTACAGACCCAGGGAGGACGAGCTGCTGCGGCCGCTCGAAAGACTCTGCAGCAACAGAGGACCCAGACAGCCGGCAGAACTGACAGGACGAGTGTAGAGGCAAACATTGGCTGAATCTCACTCCCCTTAAATTGCATCGCCTGCTCCTCCCCTTGCTtccccttcctcgcgtcttagtccgtCCCACCGAGGAAGCATGGGAGAGATGCGAGGAAATCGcgcgaggagagaggaaacgaggaaatCGTGCGAggagagggatgagacgtccctTCCTctgaagtagggctgcacgatatgctGAAAATATGCGATACTGTTGtagaatatcgcgataacgatattacttgcgataaatgaacagatattaaagggtactcagttctgcagttctgctgctttcagtattcttctaaaatacaaccaatggcttgttgaatttaaaaccaaCAAAAGGAAATCATCgctaacattcttttattgaacaaattgaacattgaattgaatataaaaggtttcattttaaagtgcagttttctgctgatatttttcAACCAACACAAAAAATATCTGCGTGTCTTTCGCAATATCTTGCACCGTTTCACAATATGTATATTGCACCAGTTGATATCGCAATGacgataataataaaaaaaacgatatattgtgcagccctcgTCCGAAGCATCAcatgaattcgtcagctgtgtgggcggagttagcaacggctttcagctgcacggcttccgggaaggctgctctctgcATCCTCGCTCATATCTCCTCAGAGATCCTTTCTCTATCCTCGATCCTCGGGGCAGGAgcaagagctttgagacggcttTAACAAAGGAGGGCCAGACCCACCTCGGGTTCAACAGAGGAGCAAGGAGCGAAGAGCTATCCAAGAAGAGAAGTGAGattcagcctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgcgcgcctcAGAGAAGGAAGCTCATACTGAAGCTTTATTCACTTCctgtgtttaatttttttttgtttgacctTAAAAACACCATCAGACTCCTGTGATCCATATGATGGCCTGATGAATTCCAGAGTGGCGTCACTGGAGAGAAATGACAGTTGGATCGTCCACGGACAGTTTCAGCCTAATTTGAAACCCGCCACATTAAGAAGCCAAAAAGACTCCACCTTTATTTAAAAGCCTGACCAGCTTACTGTAACATGTAGAGCACTTTAGGTGGATGCCCGTGCCCACCTTTAAACACATACCAAAGAGAAGAACATTGACTGAAATGGCCTTTTTCTtgattgctgtttttttccacagctatcatttcattttttttttatataatactgtatttctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtaaacttaAAGGGAAAATCCACCTCAAAACATGACGACGAAGAGCGACTTAAATTCAATGACATATCCAGCAGCTTAGTAGAGTTGGGATAGCAgaagtctatatcgacgacgttccacttccgggattgttcaggtgccgccggaaattccgccgatTGTCCCTCTTTTTTTGGCCaaatgtccgtccccttcctctttctttgtgttggcgttct

Function

symbol description
adamtsl5 Predicted to be located in extracellular region. Orthologous to human ADAMTSL5 (ADAMTS like 5).

NR:

description
PREDICTED: ADAMTS-like protein 5

GO: NA

KEGG:

id description
K24432 ADAMTSL5; ADAMTS-like protein 5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039794130.1 True 3952 mRNA 0.51 13 41063040 41115545

Neighbor

gene id symbol gene type direction distance location
hypk hypk coding downstream 44133 41015469 ~ 41018907 (-)
vps33b vps33b coding downstream 64263 40974790 ~ 40998777 (-)
prc1b prc1,LOC102796011 coding downstream 89359 40952915 ~ 40973681 (-)
ptpmt1 ptpmt1,LOC102795413 coding downstream 114475 40937815 ~ 40948565 (-)
ndufs3 ndufs3 coding downstream 128484 40929470 ~ 40934556 (-)
crtc3 LOC103367860 coding upstream 30973 41146518 ~ 41191697 (-)
iqgap1 iqgap1 coding upstream 84196 41199741 ~ 41273359 (-)
LOC120555591 cdkn2aip,LOC102799175,LOC108249214 coding upstream 227123 41342668 ~ 41345195 (-)
tp53bp1 tp53bp1,LOC104941490 coding upstream 245970 41361515 ~ 41392815 (-)
ppip5k1a ppip5k1 coding upstream 337487 41453032 ~ 41500407 (-)
G33196 NA non-coding downstream 125976 40936841 ~ 40937064 (-)
G33168 NA non-coding downstream 137986 40920334 ~ 40925054 (-)
G33167 c1qtnf4,LOC102794664 non-coding downstream 144456 40918227 ~ 40918584 (-)
G33109 NA non-coding downstream 499109 40562192 ~ 40563931 (-)
G33068 NA non-coding downstream 728093 40331750 ~ 40334947 (-)
G33347 NA non-coding upstream 329984 41445529 ~ 41445742 (-)
G33368 NA non-coding upstream 445287 41560832 ~ 41565475 (-)
G33369 NA non-coding upstream 450670 41566215 ~ 41566420 (-)
G33371 znf408,LOC104941494 non-coding upstream 455457 41571002 ~ 41571236 (-)
G33383 LOC103462981,LOC106924557,LOC102221671,LOC103155220 non-coding upstream 554855 41670400 ~ 41672862 (-)
LOC120556513 NA other downstream 399383 40661364 ~ 40663657 (-)
G33122 NA other downstream 400419 40648676 ~ 40662621 (-)
LOC120556146 NA other downstream 473376 40564241 ~ 40589664 (-)
LOC120556511 LOC102208128,LOC101468289 other downstream 920992 40049624 ~ 40142048 (-)
slc6a5 slc6a5 other downstream 1827294 39205275 ~ 39235746 (-)
sirt3 sirt3 other upstream 642082 41757627 ~ 41764896 (-)
G33711 NA other upstream 1283746 42399291 ~ 42402136 (-)
G33796 NA other upstream 1869678 42985223 ~ 42990770 (-)
G33847 NA other upstream 2099089 43214634 ~ 43214987 (-)
G33914 NA other upstream 2337167 43452712 ~ 43456847 (-)

Expression


Co-expression Network