LOC120555455


Basic Information

Item Value
gene id LOC120555455
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 45709732 ~ 45712107 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039794145.1
agtctggagccctgctaaATCAACGATGATAATGTTGAATAATCCTGCTGTTAATAATTCACCTGGTGACAGGTGAGGGGAAAGGACAGTAGACTTTGACATTTATTGAACGGAGCTGAGACGCCATTACAGGGTGTACGATCTCTGCTGGAAAACACACGACGGGAAGATTTGAAGCAGTCAAGAGAAGGGACAGGAACTCGGTGAGTCTTGTTTTTGAGAGACATTTAGATACAAAGACAGATGGCTGAGAACACTGATCTTGTTGAAAGTTACCTGAACTGCCATGTGTGTTCAGAGACTTTCAGAGATCCTGTGTCTCTGAGCTGCAGCCACAGCTTCTGTTCAAGCTGCCTGCACAAATTCTGGAAACAAGCTAAAATCAAAAACTGTCCcatttgtaaaagaaaatcCTCAAAAGAGTTTCCTGTGGTGAACTTTGCACTGAAGGAACTGGCTGACAACTTTGCTGGGAGACAGAAATCTGGATCACCTGAGAcagaaaagggagagaagaagGTGGAGGTGGTGTGTAGTAAACACCAAGAAAAGCCTAAATTGTTCTGTAAGGATGAAGATAGAGTTGTGTGTACCGTGTGTGAGTTTTCTCTCCACCACGGTCACACGGTGGTTCCTGTAGAACAAGCAGTCAGAGATCTGAAGGAGCAGCTGAAATCTGACTTACAGTCTCTGCAGGacaagagagacaaacacagacgaGTGAAGGAAACACACGATGAAATAAATCAACACTCCAAGAAGCAGCTGCTGTCTACAGAGAGTCAGATCAGAGCCGAGTTCAACAAGCTGCACCAGTTcctgaaagaggaagaggagtccaGACTGGCAGCTCTGAGGGAGGAAGAGCAGCAGAGGGGGAAGACTGTCagcagagagatgaagaggattCAGGAGCAGATCTCCTCTCTGTCAGACAGCATCTCTGCTGTGGAAGCAGACCTGCAGAAAGACAGCGTGCCGTTCCTCAGCAGTTATAAAGCCTCTCAGAGCAGAGCCAGAGACCAGTGCTCGCTGTCagatccacagctgctctcaggagcgCTGACAGATGTGGCCAAACATCTGGGCAACCTGTCCTTCAGAGTCTGGGAGAAGATGAAGGACAAGGTCCACTTCTGTCCCGTCattctggacccaaacactgcaGCCATCAGTCTCTATCTGTCTGATGATCTGACTAGTGTGAGGCAGGGAGACACAGACCAGAAGCTTCCAGACAATCCAGAGAGATACAGCAGGTATGCAGATGTTCTGGGCTCTGAGGGTTTCAGCTCAGGGAAACATAGctgggaggtggaggtgggagATCATCCTCGCTGGGTTGTGGGTTTAGCCAAAGAGTCAGCTGACAGGAAGGGAAAAAGATATGTTTCACCAGAAGATGGAATCTGGTGTTTATCACATGGCAGTGGAAAATACACTAATGGATCTGGTAAGAGCATCACAGTGAAGAAGAGTCTCCAGAGGATCAGAGTCCAGCTGGACTATGAGGGGGGGGAGGTGTCCTTCTACAACTCTGAAGACAAGACTCACATctacactcacagagacactttcactgagaaactcttcccTTGTTTCAATATCGGACAGGCTGGTGATGCTAAAACTGCAGAAATCAAAATCTTTCCAGCTGAGATTTCTCTGTCAGGTTCAGAGAACTCAGAGAAggtggagagagaagagaaggtgaagagaggagagaaggagaagagagCGCAAAGTCGTTTAttaggtgtaaaaaaaaaaagataaattaagATTTGATGTGTTTTATCAAATGACCTGATGGAAAACATTCCTTGGTTGTTGTTTGAGACACAAAATATTTCCAAAGCCCAGAATGAGAAACTACAGCTGAGCTGCTTTTGGTGTAAATGTGCTGCAAGAACTGggattttaataaaaatatgttttctttttaatttccaaggatgagtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgcgcgtgcgtgtggtGATGAAGGGGGGGCATGTGTTCAAGTTGCGAggttgtatgttttgttttttgttaaaaaattatTCATTGTTGAtcacaaaaaagtaatttttcaggagagagatgagagagaaaaccaaaagacattGTTCTGTTTTTAGTGTTTCTGATTTGTCATGTTGATACTGtttacctaataaactggcaacatTCCCAGAATGCATCACTCCTAAAGTGAATGAGCCTAAATGTTTGCGTGGGGGCCCAGAGTAgactcttaaaggggtgatagaatgattatatagggtatttgctaatggggtatgtaacattggttgggct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039794145.1 True 2376 mRNA 0.45 1 45709732 45712107

Neighbor

gene id symbol gene type direction distance location
wdr59 wdr59 coding downstream 103445 45579658 ~ 45606287 (-)
LOC120555448 NA coding downstream 134367 45571016 ~ 45575365 (-)
LOC120555447 NA coding downstream 179675 45527840 ~ 45530057 (-)
LOC120555446 NA coding downstream 207045 45500845 ~ 45502687 (-)
nob1 nob1,LOC107081613 coding downstream 236611 45461498 ~ 45473121 (-)
LOC120555462 NA coding upstream 74889 45786996 ~ 45788703 (-)
LOC120555463 NA coding upstream 91180 45803287 ~ 45804631 (-)
LOC120556539 NA coding upstream 405117 46117224 ~ 46125696 (-)
LOC120555950 NA coding upstream 416693 46128800 ~ 46143264 (-)
LOC120556278 NA coding upstream 612303 46324410 ~ 46329576 (-)
G34633 NA non-coding downstream 13787 45692398 ~ 45695945 (-)
G34581 NA non-coding downstream 55811 45611051 ~ 45653921 (-)
G34621 NA non-coding downstream 85239 45613500 ~ 45624493 (-)
G34593 NA non-coding downstream 86829 45621446 ~ 45622903 (-)
G34607 NA non-coding downstream 104171 45584767 ~ 45605561 (-)
G34586 NA non-coding upstream 16626 45728733 ~ 45741604 (-)
G34638 NA non-coding upstream 19243 45731350 ~ 45732215 (-)
G34639 NA non-coding upstream 30516 45742623 ~ 45784911 (-)
G34643 NA non-coding upstream 99237 45811344 ~ 45811667 (-)
G34644 NA non-coding upstream 100386 45812493 ~ 45812771 (-)
G34617 NA other downstream 126065 45582497 ~ 45583667 (-)
G34551 NA other downstream 415525 45287805 ~ 45294207 (-)
G34518 NA other downstream 438719 45138656 ~ 45271013 (-)
LOC120556527 LOC102787635,LOC101476187,LOC100691227,LOC106610718 other downstream 794066 44791982 ~ 44915666 (-)
G34078 NA other downstream 1620041 44040360 ~ 44089691 (-)
G34584 LOC108242767,LOC105923784,LOC108242778 other upstream 47381 45759488 ~ 45769788 (-)
G34594 NA other upstream 142533 45854640 ~ 45857478 (-)
LOC120555951 LOC104934393,LOC103372831 other upstream 432877 46144984 ~ 46184302 (-)
vps13c vps13c other upstream 487597 46199704 ~ 46317024 (-)
G34718 NA other upstream 643412 46355519 ~ 46356020 (-)

Expression


Co-expression Network