slc7a6 (slc7a6,LOC104919890,LOC103355407,LOC102782072)


Basic Information

Item Value
gene id slc7a6
gene name slc7a6,LOC104919890,LOC103355407,LOC102782072
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 3280076 ~ 3305488 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039794180.1
ATAGCAGCGTCACTCCCATGACGTCTGTTctgagaagcagcagcagcagcagtacatacagcccagcagcagCCAGTTGTTTACGGGTGCTGATGCATTCGCTAATGGACACTGGGTTGGCTGGCTGTCAATCCCGCTAGGCAGGAGGCGAAGGCAGCACAGGTTGTTCCAGAGGTTGCCAGACAGGGACAAGGGTCTATCGTGTCCGCAGCCCTCAGGTCCTCAGTTCCTGCTGTTAAAGGCTCTGAGACGACGACAGCATGGCCGACCATGAAGAATCCATGAAGATGAAGGGCAGTGCTGGCCACTCCTCCAATCTTTCGGAGCCACCCAAAGagagcatgcagctaaagaagGAGATCTCGCTGCTCAACGGAGTCAGCCTGATCGTAGGAAACATGATCGGCTCTGGCATCTTCGTCTCCCCCAAGGGTGTGCTAATCTACAGCGCCTCGTATGGGCTGTCGCTTGTCATCTGGGCCATTGGCGGCCTGTTCTCTGTGGTGGGGGCCCTCTGCTATGCTGAGCTGGGCACCACCATCACCAAATCAGGAGCCTCCTACGCATACATCCTGGAGTCATTTGGCGGCTTCATTGCATTCATTCGCCTGTGGACATCTTTGTTGATTATTGAGCCCACCAGCCAGGCGGTCATAGCCATTACGTTTGCAAACTACTTGGTGCAGCCGCTATTTCCAACATGTGAACCGCCATACGTAGCAAGCAGGCTCCTCGCTGCAGCGTGTATATGCTTACTGACATTAATCAACTCCACCTATGTAAAGTGGGGAACCCGCGTGCAGGACATATTCACCTATGCCAAGGTGGCAGCCCTCATCGTGATCATCATTACCGGCATCGTCAAGCTGAGCCAGGGTTACACAAACAACTTTGAATCGTCCTTTCAGGGATCGTCCACAGACCCCGGTGACATTGCGCTGGCGCTCTACTCTGCCCTTTTCTCCTATTCCGGCTGGGACACCCTCAACTTTGTTACTGAGGAGATCAAAAACCCTGAAAGGAACCTGCCCATGGCCATCGCCATCTCCATGCCCATTGTCaccatcatctacatcctcacCAATGTGGCCTACTATGCTGTTCTGGATGTTAGTGCTATACTGGCCAGCGATGCGGTGGCAGTGACATTTGCAGATCACACTCTCGGTGTGATGAGCTGGACCATCCCCTTTGCTGTGGCTCTGTCCTGCTATGGAGGCCTCAATGCCTCCATCATAGCTGCATCCAGGTTGTTCTTTGTTGGCTCTCGTGAGGGCCACCTTCCAGATGCTCTGTCCATGATCCACATAGAGAGATTCACTCCGATCCCTGCTCTGATCTTCAATTGCATCATGTCTCTGATCTACCTGACAGTGGAGGATGTCTTCCAGCTCATCAACTACTACAGCTTCAGCTACTGGTTCTTCATGGGTCTGTCCATCGCCGGCCAGATCTACCTCCGCTGGAAAGAGCCTGACAGACCCAGACCTCTCAAGctcacAGCCTGCCTCCtgatctgtctctctgcagctgtCCTTAGTGTACCCGGTGGTGTtctgtctgtgttctgtgttcCTGGTGGCCGTTCCTCTCTACAGCGACACTGTCAACTCCCTGATTGGCATCGCCATTGCCCTGTCGGGGGTCCCCGTCTACTTCCTGGGTGTCTATCTACCAGAATCCAAACGGCCGCCTGTCATCACCAAGCTACTGCGTTCTCTGACTCTCTCCGCCCAGCACACCTGCTACTGTGTACTAACAGAGATGGACAAAAGTGAATAGCATCCCAAACACTTTAAAACTCAACACCAGCAGTCTCTACATCTTAAAGCTGAAAGTCACCGGGGCCAGCCAGGCGAGGGAttcttctgtgaaaaaaaaaaagaaaaaaaaaaggattttattGTACTGTTCACCACGTTGAAGCTCTCAGACGCCACTGACTTGTTTACACTGAAAATGCTACCAGATGCCCAGGATGCTCCTGGAATTCAAGGCCATTCAAAGACTCCGACCATAAGGACTGACAGTACTGTTATACTGCATAGTATGGCTATTTGTATTCTTCATCACACTTTTTAATTACCTCTATTGTAAAGGATCTGCCTCGTTAGTTCCACAGGTAACTGTATAATGCCTTTTAAAGAGTATGTGCCTGTGAGATTTTACAGGCGCTGCACATGACCACAGGGACCTGATAATGATTAtacaaaaagtacatttttaatatATGGTTTTAACCCACTTTAACTGaaagatataaatatatatatctatatatctatatatatatagatatatatctatatctatatctatatatatatgcattatGTGTGAATGTGCATAATTTCACCTGTGAATGAAAAGACAAATCATAAATTGTCCATCATGTAAGCTTAGTGAACGGAAAAAAGGgaagatagtttttttttgtctgctgcTATGTGAAGACTTTGAGCCATCACCCGGATGTCATTGCCTTTATGTACATTTGGTGTCATTGTCTAATGTCTGGTAGGTGTGTTATTGCATTTTAACtgttgaaataaaacattggGCCTTTTCCATTTGGGTTAA
>XM_039794181.1
AGCAGCGTCACTCCCATGACGTCTGTTctgagaagcagcagcagcagcagtacatacagcccagcagcagCCAGTTGTTTACGGGTGCTGATGCATTCGCTAATGGACACTGGGTTGGCTGGCTGTCAATCCCGCTAGGCAGGAGGCGAAGGCAGCACAGGTTGTTCCAGAGGTTGCCAGACAGGGACAAGGGTCTATCGTGTCCGCAGCCCTCAGGTCCTCAGTTCCTGCTGTTAAAGGCTCTGAGACGACGACAGCATGGCCGACCATGAAGAATCCATGAAGATGAAGGGCAGTGCTGGCCACTCCTCCAATCTTTCGGAGCCACCCAAAGagagcatgcagctaaagaagGAGATCTCGCTGCTCAACGGAGTCAGCCTGATCGTAGGAAACATGATCGGCTCTGGCATCTTCGTCTCCCCCAAGGGTGTGCTAATCTACAGCGCCTCGTATGGGCTGTCGCTTGTCATCTGGGCCATTGGCGGCCTGTTCTCTGTGGTGGGGGCCCTCTGCTATGCTGAGCTGGGCACCACCATCACCAAATCAGGAGCCTCCTACGCATACATCCTGGAGTCATTTGGCGGCTTCATTGCATTCATTCGCCTGTGGACATCTTTGTTGATTATTGAGCCCACCAGCCAGGCGGTCATAGCCATTACGTTTGCAAACTACTTGGTGCAGCCGCTATTTCCAACATGTGAACCGCCATACGTAGCAAGCAGGCTCCTCGCTGCAGCGTGTATATGCTTACTGACATTAATCAACTCCACCTATGTAAAGTGGGGAACCCGCGTGCAGGACATATTCACCTATGCCAAGGTGGCAGCCCTCATCGTGATCATCATTACCGGCATCGTCAAGCTGAGCCAGGGTTACACAAACAACTTTGAATCGTCCTTTCAGGGATCGTCCACAGACCCCGGTGACATTGCGCTGGCGCTCTACTCTGCCCTTTTCTCCTATTCCGGCTGGGACACCCTCAACTTTGTTACTGAGGAGATCAAAAACCCTGAAAGGAACCTGCCCATGGCCATCGCCATCTCCATGCCCATTGTCaccatcatctacatcctcacCAATGTGGCCTACTATGCTGTTCTGGATGTTAGTGCTATACTGGCCAGCGATGCGGTGGCAGTGACATTTGCAGATCACACTCTCGGTGTGATGAGCTGGACCATCCCCTTTGCTGTGGCTCTGTCCTGCTATGGAGGCCTCAATGCCTCCATCATAGCTGCATCCAGGTTGTTCTTTGTTGGCTCTCGTGAGGGCCACCTTCCAGATGCTCTGTCCATGATCCACATAGAGAGATTCACTCCGATCCCTGCTCTGATCTTCAATTGCATCATGTCTCTGATCTACCTGACAGTGGAGGATGTCTTCCAGCTCATCAACTACTACAGCTTCAGCTACTGGTTCTTCATGGGTCTGTCCATCGCCGGCCAGATCTACCTCCGCTGGAAAGAGCCTGACAGACCCAGACCTCTCAAGctgtCCTTAGTGTACCCGGTGGTGTtctgtctgtgttctgtgttcCTGGTGGCCGTTCCTCTCTACAGCGACACTGTCAACTCCCTGATTGGCATCGCCATTGCCCTGTCGGGGGTCCCCGTCTACTTCCTGGGTGTCTATCTACCAGAATCCAAACGGCCGCCTGTCATCACCAAGCTACTGCGTTCTCTGACTCTCTCCGCCCAGCACACCTGCTACTGTGTACTAACAGAGATGGACAAAAGTGAATAGCATCCCAAACACTTTAAAACTCAACACCAGCAGTCTCTACATCTTAAAGCTGAAAGTCACCGGGGCCAGCCAGGCGAGGGAttcttctgtgaaaaaaaaaaagaaaaaaaaaaggattttattGTACTGTTCACCACGTTGAAGCTCTCAGACGCCACTGACTTGTTTACACTGAAAATGCTACCAGATGCCCAGGATGCTCCTGGAATTCAAGGCCATTCAAAGACTCCGACCATAAGGACTGACAGTACTGTTATACTGCATAGTATGGCTATTTGTATTCTTCATCACACTTTTTAATTACCTCTATTGTAAAGGATCTGCCTCGTTAGTTCCACAGGTAACTGTATAATGCCTTTTAAAGAGTATGTGCCTGTGAGATTTTACAGGCGCTGCACATGACCACAGGGACCTGATAATGATTAtacaaaaagtacatttttaatatATGGTTTTAACCCACTTTAACTGaaagatataaatatatatatctatatatctatatatatatagatatatatctatatctatatctatatatatatgcattatGTGTGAATGTGCATAATTTCACCTGTGAATGAAAAGACAAATCATAAATTGTCCATCATGTAAGCTTAGTGAACGGAAAAAAGGgaagatagtttttttttgtctgctgcTATGTGAAGACTTTGAGCCATCACCCGGATGTCATTGCCTTTATGTACATTTGGTGTCATTGTCTAATGTCTGGTAGGTGTGTTATTGCATTTTAACtgttgaaataaaacattggGCCTTTTCCATTTGGGTTAA

Function

symbol description
slc7a6 Predicted to enable L-amino acid transmembrane transporter activity. Predicted to be involved in amino acid transmembrane transport. Predicted to act upstream of or within amino acid transport and transmembrane transport. Predicted to be located in basolateral plasma membrane. Predicted to be integral component of membrane. Is expressed in ball and yolk syncytial layer. Orthologous to human SLC7A6 (solute carrier family 7 member 6).

NR:

description
unnamed protein product

GO:

id name namespace
GO:0003333 amino acid transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0015171 amino acid transmembrane transporter activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039794180.1 True 2580 mRNA 0.48 10 3280076 3305488
XM_039794181.1 False 2544 mRNA 0.48 10 3280078 3305488

Neighbor

gene id symbol gene type direction distance location
adgrg1 NA coding upstream 6898 3250608 ~ 3273178 (+)
LOC120555875 LOC103368003,LOC100711702 coding upstream 44057 3223869 ~ 3236019 (+)
phkb phkb coding upstream 1097322 2039463 ~ 2182754 (+)
slc7a10a LOC104919817,LOC103369274 coding upstream 1462082 1789953 ~ 1817994 (+)
zgc:165481 LOC103369239,LOC108241605,LOC103379234 coding upstream 1581717 1674741 ~ 1698359 (+)
LOC120555909 NA coding downstream 115715 3421203 ~ 3422406 (+)
mtss1lb LOC102779958,LOC108237900,LOC103462242,LOC103355402 coding downstream 318146 3623634 ~ 3724143 (+)
LOC120556182 LOC101467318,LOC102294465,LOC102206054,LOC108237897 coding downstream 567544 3873032 ~ 4152064 (+)
LOC120555911 LOC102783822,LOC103462246,LOC106925612,LOC102294465 coding downstream 858188 4163676 ~ 4254074 (+)
LOC120555425 NA coding downstream 1027577 4333065 ~ 4341288 (+)
G25288 NA non-coding upstream 139689 3139689 ~ 3140387 (+)
G25281 NA non-coding upstream 308166 2971607 ~ 2971910 (+)
G25279 NA non-coding upstream 309818 2969770 ~ 2970258 (+)
G25262 NA non-coding upstream 562616 2717070 ~ 2717460 (+)
LOC120555634 NA non-coding upstream 639148 2640084 ~ 2640928 (+)
LOC120555484 slc7a6os,LOC102781591 non-coding downstream 3887 3309375 ~ 3379915 (+)
G25316 NA non-coding downstream 55655 3361143 ~ 3435233 (+)
LOC120555485 NA non-coding downstream 77168 3382656 ~ 3388513 (+)
LOC120555486 NA non-coding downstream 83034 3388522 ~ 3389725 (+)
LOC120555487 NA non-coding downstream 107524 3413012 ~ 3414535 (+)
adamts18 adamts18 other upstream 967919 2240414 ~ 2312157 (+)
G25204 NA other upstream 1196757 2081958 ~ 2083319 (+)
G25173 dnaja2,LOC106524269 other upstream 1437265 1839333 ~ 1842811 (+)
mapk8ip1b mapk8ip1,LOC102793463 other upstream 3195650 11843 ~ 84426 (+)
mmp15b mmp15,LOC104948393 other downstream 175809 3481297 ~ 3518086 (+)
G25431 NA other downstream 479445 3784933 ~ 3785542 (+)
G25512 NA other downstream 1264885 4570373 ~ 4575645 (+)
tshz3b tshz3 other downstream 1488327 4793815 ~ 4837285 (+)
G25708 NA other downstream 2728721 6034209 ~ 6035193 (+)

Expression


Co-expression Network