LOC120555482


Basic Information

Item Value
gene id LOC120555482
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 3320424 ~ 3347207 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039794182.1
TGTGAAGGGAACAGTCACATCACATGTGTGTGAGCATCACTGAGACGATGTGGATTACTTTTTCTTTAGTCACACTTGCGTGGTTTTCTACAGCCCAAGCTGGCGGCGACTGTAGAAATGTCCTCTCTGACTGTCtaatacaacaacaacatggtGATGTCCCCTGGACCATGTGCTATGAGGACAGCATTGCAAGCTGTACAGTGAGAGGCCAACCGATCCCAAACTTCATTCATCGGAGGGTGAACTGGTCTGAAAAGGTTGAAGAGAGTCCCACTCCTGAACACAGGGTTTACATCCCAGCCTCGGCTCTCCAGAGAAGCAGGGGATCTGTGCCTGACAAGGAGACCCTGCTGGTGGCCTCTGTGATCAACAGCACTTTTTTCCAGCTGAGTCCCAATCGGTCAAAAGCGAGACTATTCATACCACCAGACCGGCCTGTTTTGGGGGGGTTAGTCCTGGCAGTGAGGGCAGGGAACCTTCCTGTCAAAAACCTCTCCCAACCCATCAAATTAACcttcaaacacaacaaacagGTGGGAGATGGGGCATGTGTGTTTTGGCGGGAGTCAACGCTTAATGATGGAACAGgtaGCTGGAGCACAGAGGGCTGTGATACCGATGACACCGGAGCTGAATTTATTTGCAGCTGCAACCACATGAGCTTCTTTGCTGTGCTTGTGAACCCTGTGTTATCAGTGGGAGAAAGTGATGCTGTGAACCTGAGCTATATCACCTACATTGGCTCAGCTCTCTCCATCTTCTTCACAGTCATCAGCTTGATCCTCTATATATGTCTACAACGTCGGCGTCCAGAGAAGGCTATCGGGGTGCATTTGCAACTAACAGGAGCGCTGCTCTGCCTCCATCTCACCTTCCTGCTGTGCAGCTTCTGGGTGTGGCATCTGAATGAGAATGAGGAGGGCTGGGTTTGCCAGGGTCTGGGTCTCTTTTTACACTGGTCCCTGCTGGCCACCTTCAGCTGGGCAGCTCTGGAAGGCTTCCACCTCTACCTTCTCTTAGTCCGAGTCTTCAACATCTACGTCAGGAGATACCTGCTAAAGCTCAGCATGGTGGGATGGAGTGTTCCAACACTGGTTGCAGTGGTTTGTGGGATTTCAGGTGTTTATGGCAAATACAGTCTGAGGGACGCCAACAACCAGACTTCAACAGCACAGATATGCTGGATGAGCAGCCAGTTCCCACAGAGGCTCCTGGTCAGCTTCATCACTACCGTGGCCGTCCCATGTGTGCTGATGATACTGTGTAATTCCTGCATGCTGGGGCTGGTGGTGTTTAAGCTCTGGGGGCTACGGGCAGGTAGTGGAGGGACTGAAAGCagtggctggaagataaagagggagaaagggatAAAGTTATTGAAAGACTGTGCCACAGTGCTGGGcctcagctgtgtgcttggcttACCTTGGGGGTTAGCAAGCATCACCTACATCTCCCTCCCTGGGATCTACATATTCACTATACTAAACTCCCTGCAGGGTGTATTCATGTTCCTGTGGGCTGTGGCTTTGACCTGCAAGTCTCGTTCTGACAATAACTCCTCAACCAGAGACCCTTCTTCTCAGAAAATAATGACCACCAGTTTCAAGAACTGATGTTCACAACTACAACAAATGTATTATCTATTGCCTATATTAGGTGTTCCTTTGGAGTCCAGTGCAGTATGTGCAGTTAAATGATAACATTACTTAATCAGCTCATGTCTCATCATGTCTTGCAACTTACTGAAATCAAGATGGCAGACACACTTGCATCATGAACAGTAACTGCTTCTAATTATTTATTGTTGCTACAATTATGATCCGTATTGTTGCAGTAATATCAGAAATGGACAGGCAGAGATTATGAAAAGAATTCTCTAATTGTCCTTTCTGCAGTTAGCGCATGATCATAAAGACAActttgttaacccttgtgttgtcttcctttGACCATGCAACATAGTTTTTCtaggtcaaaattttaaatgaaaacgtttttttcgacacttttgtggcttttcccgatgtttctgtcacttcttttcaacgtttttgtcgacTTCTGTGCCTTTCTAAAGTTTTTATGGGTTTTTCCCCAAGTTTTTggagctttttccaacatttttgtcacttgtttttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039794182.1 True 2145 mRNA 0.47 12 3320424 3347207

Neighbor

gene id symbol gene type direction distance location
slc7a6os slc7a6os,LOC102781591 coding downstream 2491 3309380 ~ 3317933 (-)
phospho2 phospho2,LOC100704477,LOC102197635,LOC101485115,LOC102782954 coding downstream 96668 3219770 ~ 3223756 (-)
LOC120555903 NA coding downstream 156747 3162895 ~ 3163677 (-)
cdh8 cdh8 coding downstream 358840 2842443 ~ 2961584 (-)
itfg1 itfg1 coding downstream 1281422 1872831 ~ 2039002 (-)
LOC120555905 NA coding upstream 13346 3360553 ~ 3373692 (-)
LOC120555910 NA coding upstream 86552 3433759 ~ 3458733 (-)
LOC120555474 NA coding upstream 111900 3459107 ~ 3475892 (-)
dhcr7 dhcr7 coding upstream 243073 3590280 ~ 3601433 (-)
dpy19l3 dpy19l3 coding upstream 918037 4265244 ~ 4333520 (-)
LOC120555480 NA non-coding downstream 16569 3302972 ~ 3303855 (-)
G25296 NA non-coding downstream 124660 3195317 ~ 3195764 (-)
G25280 NA non-coding downstream 350317 2969768 ~ 2970107 (-)
G25277 NA non-coding downstream 402882 2916912 ~ 2917542 (-)
G25276 NA non-coding downstream 425315 2894715 ~ 2895109 (-)
G25391 NA non-coding upstream 116026 3463233 ~ 3463523 (-)
G25392 NA non-coding upstream 118136 3465343 ~ 3465660 (-)
G25394 NA non-coding upstream 121457 3468664 ~ 3469082 (-)
G25400 NA non-coding upstream 150964 3498171 ~ 3498536 (-)
G25388 NA non-coding upstream 160909 3508116 ~ 3522611 (-)
G25228 NA other downstream 1043333 2275475 ~ 2277091 (-)
cep89 NA other downstream 1579585 1664770 ~ 1740839 (-)
LOC120556047 abcc12,LOC102304683,LOC101479372,LOC102203605 other downstream 1678076 1587544 ~ 1642348 (-)
LOC120556048 abcc12,LOC101479372,LOC101076737,LOC102203605,LOC100701509,LOC102304683 other downstream 1764778 1510165 ~ 1555646 (-)
LOC120555898 mctp2 other downstream 1863316 1410674 ~ 1457108 (-)
LOC120556425 ap2a2,LOC104921433,LOC104965011 other upstream 2332835 5680042 ~ 5717433 (-)
LOC120555534 LOC103369663 other upstream 2809015 6156222 ~ 6167529 (-)
ankdd1a ankdd1a other upstream 2976070 6323277 ~ 6346561 (-)
pop4 pop4,LOC105418436,LOC104960843 other upstream 3162052 6509259 ~ 6524355 (-)
tpcn2 tpcn2 other upstream 3186835 6534042 ~ 6590639 (-)

Expression


Co-expression Network