foxr1


Basic Information

Item Value
gene id foxr1
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 40666272 ~ 40671602 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039794189.1
CCAATCAGGATGTTCAGCTCCAGCTGTTAGATGCGCAGCCTGCAGGGCTGTCAGTGAACGTGAAACTCTCAGCAGAGAGCTTCTGAACTGAACCGAACTGAGAGGGAATAAACCCAACAGCCACTTCCAACCATGACCTTACAGCTTAAAACCAAAGCTCGCCTCTTGGACCTGCACTGCTCTGTGGGCCTGACGGACTGGGACATGGACAAGGAGCTGAGACTGGCAACGACCACCGACCAGTTTTACCACGATGACAAACTGAATGATCAGTACGTGGTCCAGAGGCCTTCTGCAAGAGCCTCAAGAAGAAAAGATGAATTCATTTGGTACGATAAAACGTCCGACACCTTTGTGAAGCCAAACCTGTGGCTGTTGGTGAATCCCAGTATTGCCTGCCCGATCCAGTACGGAGAAAATACAGCAGATCTGCAGACTCTCTGTGAACCGGCTGAGGAAATCCAAACGCctctgctgaaccctgcagagACCCAACGTCAACTCGCCACAGAGCTCCACATGTTTGACCCCCATGGTGCTCCTCTCCAGGAGGAACTGCTGCACTCCACTGAGTACATGAATGAAGACGTTTCCTGTCGACCAGCCAAGAACAGACGCAAGGGAAGGAACACAAAGGCCAAGGACAATAAGATCCTAAAGCCAGGATGCTGGCCTCGCCCACCTGTGAATTATTGCATCCTCATCGCCTTGGCGCTCAAGAGCAGCCACACTGGGAGCCTCAAAGTCCAGCAGATTTACAACTTCACCAGGGAGCACTTCCCCTTCTTTCAGACGGCGCCAGACGGCTGGAAGAACACCATCCGCCACAACCTGTGCTTCAACAACAGCTTCCGCAAAACCTGCAACCAGGTGTTCAGAGATGGCAAGAGGAAGTCGTGCTTCTGGCACCTGACTCTGGACGGCCACCGGCGGCTAAAGGACGAGATCCGCACGTTGACGGGAGAATCCCTCAAGCAGCTGGAGAGGAGCATGTCGCGCCCAGaTGTAATTCAGAGTTTGTTTGCACTGTGAGTGACTGCAGGTGTAGAAGGTATCAACTAGTTTAAGTCAATGCATAATACAACTTAATAAACAGAATGTTTCTTCTGTTATGCTGAATATTA
>XM_039794190.1
AGTCCAATCAGGATGTTCAGCTCCAGCTGTTAGATGCGCAGCCTGCAGGGCTGTCAGTGAACGTGAAACTCTCAGCAGAGAGCTTCTGAACTGAACCGAACTGAGAGGGAATAAACCCAACAGCCACTTCCAACCATGACCTTACAGCTTAAAACCAAAGCTCGCCTCTTGGACCTGCACTGCTCTGTGGGCCTGACGGACTGGGACATGGACAAGGAGCTGAGACTGGCAACGACCACCGACCAGTTTTACCACGATGACAAACTGAATGATCAGTACGTGGTCCAGAGGCCTTCTGCAAGAGCCTCAAGAAGAAAAGATGAATTCATTTGGTACGATAAAACGTCCGACACCTTTGTGAAGCCAAACCTGTGGCTGTTGGTGAATCCCAGTATTGCCTGCCCGATCCAGTACGGAGAAAATACAGCAGATCTGCAGACTCTCTGTGAACCGGCTGAGGAAATCCAAACGCctctgctgaaccctgcagagACCCAACGTCAACTCGCCACAGAGCTCCACATGTTTGACCCCCATGGTGCTCCTCTCCAGGAGGAACTGCTGCACTCCACTGAGTACATGGACAATAAGATCCTAAAGCCAGGATGCTGGCCTCGCCCACCTGTGAATTATTGCATCCTCATCGCCTTGGCGCTCAAGAGCAGCCACACTGGGAGCCTCAAAGTCCAGCAGATTTACAACTTCACCAGGGAGCACTTCCCCTTCTTTCAGACGGCGCCAGACGGCTGGAAGAACACCATCCGCCACAACCTGTGCTTCAACAACAGCTTCCGCAAAACCTGCAACCAGGTGTTCAGAGATGGCAAGAGGAAGTCGTGCTTCTGGCACCTGACTCTGGACGGCCACCGGCGGCTAAAGGACGAGATCCGCACGTTGACGGGAGAATCCCTCAAGCAGCTGGAGAGGAGCATGTCGCGCCCAGaTGTAATTCAGAGTTTGTTTGCACTGTGAGTGACTGCAGGTGTAGAAGGTATCAACTAGTTTAAGTCAATGCATAATACAACTTAATAAACAGAATGTTTCTTCTGTTATGCTGAATATTA

Function

NR:

description
forkhead box protein N5-like isoform X1

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0043565 sequence-specific DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039794189.1 True 1124 mRNA 0.51 7 40666272 40671599
XM_039794190.1 False 1064 mRNA 0.51 6 40666272 40671602

Neighbor

gene id symbol gene type direction distance location
LOC120556133 NA coding downstream 13521 40648347 ~ 40652751 (-)
LOC120556376 NA coding downstream 35147 40598769 ~ 40631125 (-)
LOC120556512 glg1,LOC100701703,LOC101472041,LOC108242135 coding downstream 250209 40386097 ~ 40416063 (-)
samd4a samd4a,LOC102311861 coding downstream 352467 40244929 ~ 40313805 (-)
slc22a18 slc22a18 coding downstream 727406 39931306 ~ 39938866 (-)
LOC120556279 atp6v0d1,LOC103462946,LOC107563463 coding upstream 1313 40672915 ~ 40682357 (-)
ndufs3 ndufs3 coding upstream 257868 40929470 ~ 40934556 (-)
ptpmt1 ptpmt1,LOC102795413 coding upstream 266213 40937815 ~ 40948565 (-)
prc1b prc1,LOC102796011 coding upstream 281313 40952915 ~ 40973681 (-)
vps33b vps33b coding upstream 303188 40974790 ~ 40998777 (-)
G33109 NA non-coding downstream 102341 40562192 ~ 40563931 (-)
G33061 NA non-coding downstream 271569 40281473 ~ 40394703 (-)
G33068 NA non-coding downstream 331325 40331750 ~ 40334947 (-)
G33048 NA non-coding downstream 457497 40207391 ~ 40208775 (-)
G32952 NA non-coding downstream 616906 40048059 ~ 40049366 (-)
G33167 c1qtnf4,LOC102794664 non-coding upstream 246625 40918227 ~ 40918584 (-)
G33168 NA non-coding upstream 248732 40920334 ~ 40925054 (-)
G33196 NA non-coding upstream 265239 40936841 ~ 40937064 (-)
G33347 NA non-coding upstream 773927 41445529 ~ 41445742 (-)
G33368 NA non-coding upstream 889230 41560832 ~ 41565475 (-)
LOC120556513 NA other downstream 2615 40661364 ~ 40663657 (-)
G33122 NA other downstream 3651 40648676 ~ 40662621 (-)
LOC120556146 NA other downstream 76608 40564241 ~ 40589664 (-)
LOC120556511 LOC102208128,LOC101468289 other downstream 524224 40049624 ~ 40142048 (-)
slc6a5 slc6a5 other downstream 1430526 39205275 ~ 39235746 (-)
sirt3 sirt3 other upstream 1086025 41757627 ~ 41764896 (-)
G33711 NA other upstream 1727689 42399291 ~ 42402136 (-)
G33796 NA other upstream 2313621 42985223 ~ 42990770 (-)
G33847 NA other upstream 2543032 43214634 ~ 43214987 (-)
G33914 NA other upstream 2781110 43452712 ~ 43456847 (-)

Expression


Co-expression Network