LOC120555491


Basic Information

Item Value
gene id LOC120555491
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 1308822 ~ 1311760 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039794192.1
AGTAATAATGGTagtattttatttacagtgaGTATGGCAAACGAGAAGGAagcgagaggagaggagagagggagaaggaaagagagaggaagtgagaggagaaggaaggatgagagaggagacaagcagaggagacaggaagtgagagAACAGGTGAGGAGAAAGGAATGCAGAGGAAATGAGAGGAGACAGAacgagagaaaagagaggaggagcaaGGACCAGAGAGGAAAGGATACAAAGATAAAACAGGGAGGGAAAGGAAGGCCAAACAACTACAATCtgtggaaagaggagaggatgaaGGGTGCCTTAGATGAATACAGGGAGGGAGTGAAGAAAGGAATTACAGTGAGTGTGCACTTCTTATCACGAGCATGGGGTGTGCCGCGATCCACACTGCAAAGACGCATCAGCGGAAAGGTGACTGGCAGTGAACATGTGTCAGGGCGGAAGCCCTACCTTCCAGAGGAGGCGGAAAGGGAGCTTGCTGCCACCCTCAAGACATTGGCGCAGAGGGGGTTTCCCTTCACAAAGCGTGATGTCCAGCAAGTGGCCTTTGATTTTGCAGCCAACAACGACATATCTGGTTTCTCCCTGACAGCAGGAAGGGCCGGATATTACTGGTTTCAGAACTTTCTAAAGCGAAACCCAGAGCTTGGGATGCGCAAGCCAGAGGTCCTGTCTGCAGCACGGGCTGCTGGACTTAACAAAGAGGTGGTTAGCCAGTGGTTTAACCAGTATGAGAACCTTTTGGTCGAGCTGGGTATTGAGGGCACACCGTCACATATATGGAACTGTGACGAGTCTGGGCTTCAGGACCAGTTCAGTTCGACAAAGGTTGTTGGACAGGTTGGCCAGCCATGTGTGGAGGTGTGTGCCGGAGAGAAGGGGGAGACAACAACTTGTCTGGCAGCGTTCAATGCAGAAGGTACATACAGTCGaacaataattatttttaaggGGAAGCGTGTTCGTTCTGAGTGGCTACAGGGATGCCCGGAGAACACCAGCGTAAGGTGTTCAGACAATGGCTGGATTACCTCTGACCTCTTTCTGGAATGGGGTCAAATGTTCATTCAGTCCCTCCCCAGGGATGACCCCAGGCCCCATCTTCTCCTCCTTGACGGCCACAGTAGCCACGTCTATAATCTGGAATTTATTAAGCTACTGAAAAGCAAGAATGTGCACATCATGTGCTACCCTCCCCACACAACCCATGCGCTGCAACCGGCGGACAAGGCCCTCTTCAAGAGTCTAAAGCACCACTGGGACCAGGAAGGGAGGAAGTGGACAAGGATGATGGCTGGGCAGAAGCTGTCAAGGATGGAGTTCTTTGCGGTGTTCAGCAGGGCTTGGGCAAAGGCTGCCACTATTGAAAATGCCCAGGCAGGGTTCCGGGGGACAGGGATGTTCCCTCTCAATAAAGATATTCTCCCTGAGACTACTTTTGCCCCCAGCAAGACCACCGAAAGAATGCTACCATCCACTCTACCATCCCCGCCCACAAGGCTGCAGTCTCTCCCACCCCCGCCCACTAGACCATGGTCGCCCCTGCTGACCTTGACCCACTCTGCCCGCCAGCCATCAGCCCTGCTCTCTGGACCTCAGCCCTCCCACCCGCCAGCCAGACGTCAGTCGCCTGCCGATCCGCCAGCCAGACCTCAGTCCTCTGCTTCCCTGACACCCCTGCTACCTCGGGAACCACTGCACTTTTTCCCAGAAGATGAGGTGGTGCTTGAAGAGGTTGTGTTGGAGGATGTACCGGaagaagataatgacctcttcaaTCAGTTCACACCACAGGAAGAAACCCACTCCCAGGATGAGGGACCTTCAACCTCCACATCTGTGAGATCGGTCACATTCAATGACTTGATCTCAATGCCGCAAAGGGAGAGGGCCATCAGAAAGAGAGTGAAGCCACCATCGTATAACCTAACAAGTGAGCAACACATTGAATAtattcaaacaaaaaaatcatccaGCAAGCATCCAGCCAAGCAAGCCAGCTGGTACCCGGGCAGCAAGCAAccgaaagggaaaaaaaagcagggcAAGAGAAGCAAATCACcttgcaaagtctgcaacaccCACTATGGTGACCCAAATGACCCTAAGGCTACTGAGgaatggttaaaatgtgttcCATGTTCTGCCTGGTTTCATGAGAGCTGTGGTGAAGACAATGGTATCTGTGCTGACGATGGTTTCATTTGCAAAGACTGTGTTTGAAAAGTTTTCACACAAACATATCAGTTAATAATTTGGAATGtgaatttttgtatttttgtgaatgcacATTTTGTTCTAAATGtgttgttcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaccactgacaGTTCACTGATCTATGCTGTTCcaaaatggatttttttaattgcacatttgAATATGTGGGTTTGcacccaaaatgttttttgaatgGCACATATGAATTTTTGTTTAATGCAGTTTAAATGTTATGTGGCTGTATAAGCAACtgtgttttaaaattaaaattgatgATAAATGACTATTTCCCTTTGGAGTTTGActggcccattttacctgaagctgtggcccattttacctgaaACTGCTCATGCAACAAATGTTGGCAGAGCTGATGTTTCAAGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039794192.1 True 2723 mRNA 0.49 2 1308822 1311760

Neighbor

gene id symbol gene type direction distance location
LOC120555381 LOC102205592,LOC102787001,LOC102297232,LOC101476278,LOC100534518 coding upstream 39819 1262950 ~ 1269003 (+)
LOC120555232 NA coding upstream 56921 1246885 ~ 1251901 (+)
glo1 glo1,LOC103369175,LOC104919745 coding upstream 68365 1228417 ~ 1240457 (+)
eprs1 eprs,LOC102787790 coding upstream 81164 1204494 ~ 1227658 (+)
kif13ba LOC103358451,LOC107099140,LOC107397337 coding upstream 145804 1103597 ~ 1163018 (+)
LOC120556244 LOC103369184,LOC102786692,LOC100700148,LOC101476567,LOC102297530 coding downstream 688 1312448 ~ 1364726 (+)
LOC120556440 LOC104962514,LOC103369193,LOC107381980,LOC106931206 coding downstream 66250 1378010 ~ 1385075 (+)
zgc:165481 LOC103369239,LOC108241605,LOC103379234 coding downstream 362981 1674741 ~ 1698359 (+)
slc7a10a LOC104919817,LOC103369274 coding downstream 478193 1789953 ~ 1817994 (+)
phkb phkb coding downstream 727703 2039463 ~ 2182754 (+)
G24991 NA non-coding upstream 5870 1302719 ~ 1302952 (+)
G24984 NA non-coding upstream 50006 1258519 ~ 1258816 (+)
G24972 NA non-coding upstream 54231 1253197 ~ 1254591 (+)
G24926 hmbox1,LOC104919714 non-coding upstream 123595 1184725 ~ 1185227 (+)
G24920 LOC104919714 non-coding upstream 130641 1175326 ~ 1178181 (+)
G25011 NA non-coding downstream 74288 1386048 ~ 1386264 (+)
G25008 NA non-coding downstream 101335 1413095 ~ 1415747 (+)
G25144 NA non-coding downstream 457522 1769282 ~ 1774440 (+)
G25203 NA non-coding downstream 871046 2182806 ~ 2183770 (+)
G25220 NA non-coding downstream 903487 2215247 ~ 2215548 (+)
mapk8ip1b mapk8ip1,LOC102793463 other upstream 1224396 11843 ~ 84426 (+)
G25173 dnaja2,LOC106524269 other downstream 527573 1839333 ~ 1842811 (+)
G25204 NA other downstream 770198 2081958 ~ 2083319 (+)
adamts18 adamts18 other downstream 928654 2240414 ~ 2312157 (+)
mmp15b mmp15,LOC104948393 other downstream 2169537 3481297 ~ 3518086 (+)
G25431 NA other downstream 2473173 3784933 ~ 3785542 (+)

Expression


Co-expression Network