LOC120555501


Basic Information

Item Value
gene id LOC120555501
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 6493937 ~ 6495721 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039794210.1
GCGCCACAAAGGCTTTAAGTACTTAAACACAGCAGCTCGTCTCCTCAGAAAGACAAGACGAACTATCAGAAAAAAGACACTGACAACAGGACTCTTGTTGACTTGTTGCCTAGAAACAAAGACACCATGGCTGTACAGCTCATGTTTACTCAGGATAACCGGGACCGGATACACGCTGTGGAGAACTCATTTGGGCCCAAGGTGAAGCCCTTGTCCAAGCCGGGTCGGGTCCTGATCGGAGAGGGCCGGCTGATGAAGCTGAGCCGCAGGGGGCCGCAGCCTAAAGTCTTCTTCCTCTTCAACGATGTGCTGGTGTACGGCAGCATCATTCTGAACGGCCGTTGGAACAAAAAACAGAAGATCATTCATCTAGAGGACATCCAGCTGGAGGACTTGGAGGACAGCGTGACAATGAGGAACCAATGGTTGATCCGCACACCACGCAAGTCCTTCTACGTGTCAGCCATCTCAGACAAGGAGAAGCGAGCCTGGATGGAACACATCGAGGACTGGCGGTCCAGACTGGTGCAGAGCGGTGGCTGCAGGCCCGGCTCCACCTTCGCTGTCACCTGGATCCCCAACCATGCCTCTGCGGTCTGCATGCGCTGCTCCGATAAGTTCACCATGGCCCAGCGGCGACACCACTGCCGGAGATGCGGTTTCGTGGTCTGCTGTGCGTGCTCCAAGAAGCGAGCGGTAATCCAACACATTCACCCGACTAAGAGGTTGAGGGTCTGCACCACGTGTCACTCGAGTCTTTCCACGACGGACGCAAAAACCCAAGAGATGTCTCGTCAGAGGGGAGACAGCACAGAGAAGATCGGTTCGGATGAAGATGAACTGGAGGGATccagtgaggaagaggaggcagaggagcagATGGAGGACCATGACCCCAGCAGGTGGATGGAGACCCAGATGGACTCCTGGTCCCCATATGTCTACCTTAAACCAGACCATTTGAGGCCCCAAACATGAAGCACACCAAGAGTGCTGCAGCCACTCAGAACGCACCTGGCGTTGGTCTTTCTATAACATGGACACAACACTGATGCAGCTTTGTGCAGTCAGTCATGAACATAACAAGACAATAATGTATTAAGTTAAATTATTttgtacatactttatttaTTGATGTGAATAATTTGTCTGTTCACATTGTGCTGTTTGTGGGAACACTGCTGCTGTGAAGTCCTTGATTTGCTCTGATAATGTGGTCAGAGGATTTGGAGTAGAACACTAAAGCTAGGTCTCAGTCTGCCTTAGTCTGACTAGATTTTAATTTAAGACTACCTCCTGTGGAAAGGACATCCTGGGATTTCTAGTGATGTCACACAATTGTGGGTGTGGCCAACAGAACACTTCTTCTGCAGCAAAAACTTTGATGAATTTATATTGTGTAAATGTATAGTGCTGTGCATTTTGTGGAAAATATTGCCCTGACATCCACTACAAGggtcatgttttaaaaatgaaataaataacttttttgagt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039794210.1 True 1495 mRNA 0.49 2 6493937 6495721

Neighbor

gene id symbol gene type direction distance location
mtch2 mtch2 coding upstream 182797 6295097 ~ 6311140 (+)
trnal-uaa_1 NA coding upstream 441040 6052815 ~ 6052897 (+)
trnal-uaa NA coding upstream 441968 6051887 ~ 6051969 (+)
fadd NA coding upstream 461783 6026435 ~ 6032154 (+)
ano1a ano1 coding upstream 472517 5917556 ~ 6021420 (+)
bnc1 bnc1 coding downstream 691008 7186729 ~ 7211577 (+)
sh3gl3a LOC100692766,LOC101467334,LOC103355412,LOC102293456 coding downstream 736827 7232548 ~ 7290870 (+)
LOC120555848 LOC107591295,LOC105891088 coding downstream 822188 7317909 ~ 7330702 (+)
adamtsl3 LOC101469981 coding downstream 859156 7354877 ~ 7670801 (+)
LOC120555922 NA coding downstream 1279912 7775633 ~ 7783499 (+)
G25797 NA non-coding upstream 65677 6428058 ~ 6428260 (+)
G25713 NA non-coding upstream 213150 6278701 ~ 6280787 (+)
G25710 NA non-coding upstream 455968 6036859 ~ 6037969 (+)
G25709 NA non-coding upstream 458148 6035456 ~ 6035789 (+)
G25675 NA non-coding upstream 581484 5911229 ~ 5912453 (+)
G25824 NA non-coding downstream 33797 6529518 ~ 6532184 (+)
G25827 NA non-coding downstream 94474 6590195 ~ 6590618 (+)
G25850 NA non-coding downstream 145729 6641450 ~ 6641983 (+)
G25888 NA non-coding downstream 478614 6974335 ~ 6979755 (+)
G25893 NA non-coding downstream 491791 6987512 ~ 6991931 (+)
rwdd3 rwdd3 other upstream 98231 6382570 ~ 6395706 (+)
LOC120555541 NA other upstream 204161 6262410 ~ 6289776 (+)
G25743 NA other upstream 205860 6287048 ~ 6288077 (+)
G25708 NA other upstream 458744 6034209 ~ 6035193 (+)
tshz3b tshz3 other upstream 1656652 4793815 ~ 4837285 (+)
LOC120556365 LOC102793592,LOC103366350,LOC101487888,LOC102307622,LOC100694289 other downstream 498235 6993956 ~ 7005678 (+)
G26205 NA other downstream 2257980 8753701 ~ 8760301 (+)
G26236 NA other downstream 2573008 9068729 ~ 9155343 (+)
cers3a cers3,LOC102798777 other downstream 2837508 9333229 ~ 9378611 (+)
adamts17 adamts17 other downstream 2895387 9391108 ~ 9604462 (+)

Expression


Co-expression Network