LOC120555515


Basic Information

Item Value
gene id LOC120555515
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 10745861 ~ 10750166 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039794260.1
ATGATGCATCGCTAGCACTAAAGTTAGCATTAACTTATGTTAGCTTCACACTAGCTGGTGTTTTTACTCTAATTTCAGTGTCCAGCTCAAGTTTTTTGACTTTAACAGTAGTGGTCTTTGTTAACCTCTGTTTGTCAGAATGACCATAACTCGACAGTGGCTGCAGCCGCACAGAGCCTTATAAATGTGCTCACACAGAACCTCTCTCAGGGACAGCAAGAGCAAGGAAAAAAGCAGGAACAGGAATCTTCATCTGTAGAACAAGAGATGACCAGATCTTTTCCTGGATTTTTCTCAAGAAAAAGTTACCTTggaaagtgaaagagacagAGTCCAAAGACCTGTAGCACACCATATACAAAACCCTGGAAGCCTTTTAGTTTCTATGTGTATCTGTTGAACATTAATTCAGAGACAACCCCAAACTCATCTGAAGAGTCTGAGCTTGCCCAGGCAGGGCTTGGAAAAAGACATCTCACCATGTCCAGGGATATGAGTCACGAGGAGGTATTGCAgacaatttatttaaaatttgcaCCTAAATTCTTATATTTAAAACATTCCCTTTCATTGTAGTGTTAGGCTATTCTTCAAGCATCAACACATCACTTAGTTATGTTCTCTTAGTTCTTTAGACTACTTCAAAATGAGTACCCTAAGATGCAGGGAGTGACAGGAGGTTGGCTACTCTACAAGACTACAGGTGGTCAGGGTAAAAGGAGACTGGTAATGATTCCTCCTGACTCTGATGGATCCACTGGAACCCTACTTCGCAGTGTTACAGGGGCAGGAAAGGGCACCCTGTATATTGTGCCATTGCAACATGAGTTTGACCTAACTCCCCTACCTCCAGATGCCATTGAATTCCGAAGCATGCCAAAAGCACAATGCCAAACATGTAAAGTGATTTTTCCTTTGCACATTTTGGCCCTTCATGTTCAAGAGTGCATGGAGTCTCAGTCAGCAGGAGAGGATATTGAGAAAGTTCCATGTCCTATCTGTTTCTTGAACTTTACACCACAGTTTGTAGAGATCCATGCTAGCATGTGTGGAGAAAGAAGAAAGGACAATCTTAAAATGGCTGAGACAACTGCCGTGAGCCAGGACAATGGAGAGGAGCACATCAAAAGTGTTGATGATGTATTGGATGCCATTTGTCGAAGAGTTGACGTAGAGAAACAATTCAACATCCAAATCTCAAGAACAAACATTCTGGAGAGAGGCCTACTGCAGTGGCaacgccaaaaaaaaaattcacccaCTGCTACTCTTTGGGGAGGCAGGAGTGGACACAGGTGCGCTCCGAAAAGAATTTCTCAcagAACTGATGGCAGGAATTGAGAGCCATTTCTTTGAGGGGCCAGAGCACCAGAGGAGCCCACGATACTCTCTGACTGACTTTGACAGTGGCCTGTACAAGACTGTTGGAGAGATTTTGGCAGTTAGTTTGGCACAAGGTGGCCCGGCCCCTGCCTTTTTCAGCCCATGGACTTACAGTTACCTCTGTAGTGGGCAAATAAACCCAACTACTCTTAACAGGGATTCAGTTGCTGATGTCCAGTTGCAAGGGTTATTGGACCAGgttGAAATGTCAACTGAACATTCAATTGAAGGCCTATCTGATGAAATCTTAAATTGCGGATATACTGGAGCTATATCCGTGCAAAACAAGGAGTCCATTGTTCGTGCCATCATACTCCATGCAGTGCTGAGGTTGCAGCCTATGTTGGATCAATTGAGGGAAGGCCTGCAGCTGTATGACCTTCTTCTGCTAATTGGGCAGTACCCAGATATCTGCCAGCCCCTGTTTGTTCCTGGGGAAGATGTAAAAGTCAATGCAGAGTTTGTCATGGCATCCATACTTCCTCAACTGAGTGAGAAAGGGACTTCCAGGCATCAGATTGAGCTGGAGATGATCAACTTCATTCAAGACTTCCTTTATGAAGCTGAAGCTGAGGATCAGGGGCATGTAGATTACCAAGATGGCCTGCATTCCATCACACCTGCCCGGTTTCTACAGTGGATCACAGGCCAAGGTCACATTCCACTTCTTCCCTCAGAGAAGAAGGATTTTGCTGTAACGATCAAGTTTAACCATGACTGTAGTGCAGACTTTGGCCATCACAATGTATGTTACCCTGTTGTTTCAGCATGTGCCAAGAATATTGTACTACCTGTCAGACATATGAGGCCTTATGACCAGTTCAAAAAGGTTCTAATTGAGGCTTTTCATCTGGGCCAACAGTTTAACATGGTGTAAATATTTAGCACTagttgctacttttacttttgttgtgATTAATGAGCATTTCTTAATACAGTGTTTCAGGACTAATCATTCAAGAGTAAACATTACATATTTGTTTAATGACAGTACTGTAGAGCATTTCATACAAATCTTGCAGGTTCTAATTAAGGCTTTTCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039794260.1 True 2426 mRNA 0.43 12 10745861 10750166

Neighbor

gene id symbol gene type direction distance location
ano9b ano9,LOC103369658,LOC100691858,LOC102197938 coding downstream 13960 10640938 ~ 10731901 (-)
snrpa1 snrpa1 coding downstream 452937 10259231 ~ 10292924 (-)
zgc:113274 NA coding downstream 500475 10244124 ~ 10245386 (-)
selenos NA coding downstream 504634 10233464 ~ 10241227 (-)
chsy1 chsy1 coding downstream 514139 10127978 ~ 10231722 (-)
tssc4 NA coding upstream 16007 10766173 ~ 10789770 (-)
LOC120555500 LOC107373152,LOC106943100,LOC106904307 coding upstream 457374 11207540 ~ 11220942 (-)
LOC120556010 tollip coding upstream 495586 11245752 ~ 11291530 (-)
LOC120555675 NA coding upstream 633334 11383500 ~ 11384371 (-)
celf1 celf1,LOC106561939,LOC106531342,LOC106587097 coding upstream 637511 11387677 ~ 11463360 (-)
G26585 NA non-coding downstream 10923 10734726 ~ 10734938 (-)
G26584 NA non-coding downstream 11998 10733351 ~ 10733863 (-)
G26551 NA non-coding downstream 126000 10619661 ~ 10619861 (-)
G26550 NA non-coding downstream 126220 10619430 ~ 10619641 (-)
G26525 NA non-coding downstream 327045 10418470 ~ 10418816 (-)
LOC120556132 shcbp1,LOC102795229 non-coding upstream 110887 10861053 ~ 10867598 (-)
G26633 NA non-coding upstream 127830 10877996 ~ 10878332 (-)
G26635 NA non-coding upstream 128815 10878981 ~ 10879313 (-)
LOC120555827 NA non-coding upstream 205570 10955736 ~ 10956607 (-)
G26675 NA non-coding upstream 256007 11006173 ~ 11006595 (-)
G26298 NA other downstream 1449115 9295068 ~ 9296746 (-)
LOC120555589 cemip other downstream 1766717 8759601 ~ 8979144 (-)
tlnrd1 mesdc1 other downstream 1987053 8733419 ~ 8758808 (-)
il16 LOC102796330 other downstream 2048239 8630608 ~ 8697622 (-)
LOC120555934 NA other downstream 2249226 8494353 ~ 8496635 (-)
mtfmt mtfmt,LOC102776665,LOC102776373 other upstream 726340 11476506 ~ 11510300 (-)
LOC120555651 NA other upstream 893065 11643231 ~ 11669269 (-)
G26891 NA other upstream 1210535 11960701 ~ 11961772 (-)
G26924 LOC108281047 other upstream 1554373 12304539 ~ 12304824 (-)
G27075 LOC104939823,LOC100707594 other upstream 2319830 13069996 ~ 13095766 (-)

Expression


Co-expression Network