LOC120555520


Basic Information

Item Value
gene id LOC120555520
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 13723593 ~ 13727470 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039794263.1
AGTTCTGTGTTCCAAATAGTTCCGACTCACTAACAGTCAACTTCAGTCAATGGCTCCTTCACAAGTTTCTGGTATGATGATGAGGAATCTTGTTTTTGGGGTCATTCTTGGACTTCTCGCTGTTGTCCACTCAACACCTGTTAACACTGTAACCCAGATCCCCACCAAAGATGAGGATGAAGTTTTCAAAGAGGCCGTGACAGAAGGCTACCTTGTCGAACCCTATTTCATCAGGTTGCTCACAACTGAATCACCCAAAAGAAACACAAGCGTTAAGGCATCCACCCAGAAGCTGTCCTCTGACTCCAAAGAGAGGGACATGATTGAAGGCAGTGCTGCGGGGGACACCAACGACAAGACATCCATGTTCCTCCAGTTTGCAACCACAACTCCGAGTGTTTCACACGTTCAGAGCTCTGCCTCCACAGTATTGACAAGGGACACTGTCCATTCCAGTCCAGATCCAGCCACCAGCCGAAGCCATCAGTCTAGCTTTACCTCTTCATCAGTGCCAAGTAAAGCCCGGTCAAGCGTAACCCTAGACCAAATCTCAGTCTCTCTAACTACTTACCCAGCTGTCTCCACCTTTGACTTCCTGAGCACCCAGAGTTCTGATTTAGGGTCTGGAGATGGAGAAATGCTTGGCCAGTACTCTACTACAACCTCCAGTACAACGTCTAGCTCTAACACAGACACTAGCGCTGCATCATCAACCTCCACGGCAGCTTTTATCAGACCAAAGGCTCCAGTAACGTTTGCCGGAAGTGAAGGATCAGGCGAAGGATCAGGAATGGAGTTCAGTACAGTGTCAAGCAGTACTGGAGAAAAACTAAGAGCTGTGCAGCATGCAATACTCAAAGATGTTCAAAACCCACTCAAAGTGGATCAAGACATTGTTCTGGGACCCAAGAACAAAGAACACAGTACGCCAGGTTGGATCATGATCCTTGCTTTAATGGTTGGTTTTGCAGCACTGGTAATGGTCTTTGTTGCCCTCGCTACCAGAAACAAATGGAGTGGACCACGCCATGCATCCCAGATCGAGACCAAAACTAACTTCTCAAACCAGCAGATGGGGCTAGAGATGGAGACATTCCTGCACAAAGACGAGCTCTTGGTGAATGGAAAGGCAGGAGATTACACAGTCATCCCCCTGGATGAGATTCCAGAGAAAGATTCATCACACTGAAGTTCAGAAACAGACCCTCTGGCTAATTTGAGGCTTTGAGACTCATCACAGAACCACAAGACTGTGTTGGAAGCAAATGGTTTTGATCCGAGGAACAAAACTGTCGGGGCTGTTGAGCAAAAGTTTTCTGTGGACTTTCACATCTCTGAGCCCAGTGTGAACCACAACCATGATCCGGCTTTTCCTGCTGACTTTCAAGAACTCTTATAATAGCTTTACTTTGAAACTAATATTTTGGTTGATGAATGTATTGCCATATCTGCTCTTGTATTAAGTGTAAAATACAAAACTAGTTGGGTAGGAATCACAAATGCcatttatttcaaacaaaatctcagtgttttattttctttttttttaattattgtaaataatgtcttttttttaactctatGTGGATACATGAACATGATCCTATGTGCAGTCTGGTGGAAATGTCTTTTTAAGGTGTCTTTGTTGTGTTAAAAATCACTTTGTAAAATCATTATTGATGACTATGTTGTTGATTGTAAATTATATGAAGCTATTCTTTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039794263.1 True 1723 mRNA 0.44 5 13723593 13727470

Neighbor

gene id symbol gene type direction distance location
chst1 chst1 coding downstream 316978 13402324 ~ 13406615 (-)
LOC120555522 NA coding downstream 429332 13285241 ~ 13294261 (-)
LOC120556590 NA coding downstream 434329 13289210 ~ 13289264 (-)
pdcd7 NA coding downstream 475177 13240686 ~ 13248416 (-)
ubap1lb ubap1l,LOC107685210,LOC106932412,LOC103156499,LOC105938593 coding downstream 485341 13208329 ~ 13238252 (-)
hsd17b12b hsd17b12,LOC103367509,LOC108234813,LOC106951467,LOC102212771 coding upstream 240244 13967714 ~ 13995315 (-)
ttc17 ttc17,LOC103361721 coding upstream 290082 14017552 ~ 14048294 (-)
trpm5 trpm5 coding upstream 334566 14062036 ~ 14090460 (-)
kcnq1.1 kcnq1,LOC101467915,LOC102292488,LOC102797067,LOC100697082 coding upstream 373659 14101129 ~ 14153448 (-)
lingo1b LOC103361724 coding upstream 498307 14225777 ~ 14250332 (-)
G27211 LOC104946114,LOC100698156 non-coding downstream 2997 13719198 ~ 13720596 (-)
G27210 NA non-coding downstream 11325 13708919 ~ 13712268 (-)
G27208 LOC104946125 non-coding downstream 26760 13695578 ~ 13696833 (-)
G27206 NA non-coding downstream 29345 13693745 ~ 13694248 (-)
G27205 NA non-coding downstream 33996 13689282 ~ 13689597 (-)
G27230 NA non-coding upstream 26236 13753706 ~ 13754074 (-)
G27277 NA non-coding upstream 269643 13997113 ~ 14004611 (-)
G27279 NA non-coding upstream 274380 14001850 ~ 14002747 (-)
G27295 NA non-coding upstream 440087 14167557 ~ 14167758 (-)
G27297 NA non-coding upstream 442143 14169613 ~ 14169839 (-)
G27075 LOC104939823,LOC100707594 other downstream 627827 13069996 ~ 13095766 (-)
G26924 LOC108281047 other downstream 1418769 12304539 ~ 12304824 (-)
G26891 NA other downstream 1761821 11960701 ~ 11961772 (-)
LOC120555651 NA other downstream 2054324 11643231 ~ 11669269 (-)
mtfmt mtfmt,LOC102776665,LOC102776373 other downstream 2213293 11476506 ~ 11510300 (-)
G27321 NA other upstream 742288 14469758 ~ 14470345 (-)
LOC120556476 NA other upstream 850557 14578027 ~ 14580011 (-)
G27420 NA other upstream 1115243 14842713 ~ 14843905 (-)
cfap70 LOC103368539,LOC102222702,LOC102790175,LOC102296598,LOC102204478,LOC104922799 other upstream 1323192 15050662 ~ 15078830 (-)
LOC120556162 znf609 other upstream 2344099 16071569 ~ 16159882 (-)

Expression


Co-expression Network