LOC120555522


Basic Information

Item Value
gene id LOC120555522
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 13285241 ~ 13294261 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039794264.1
caaaaacgtAACCGAATCAGCCcgcagagtcagagacagacagataacaGTACTACTGGAGCGCTGCAGTGTATCTAGACATTTTACATCTGGACATCCTGAGGAAGAATGGATATTTTGCCTACAAGTGACTCTGCTAATTTCAGCACTGCGATTACATTTGAAGACCAAAACAACAATTGTCCTCTAGCAAAATTCAAAGATTGGCAGTCGAATGTGCTCCCGGCGTGTATGCTGCTGATCAGTGTGCTGGGAATCGGGATGAATGTGTTTGTCCTGATGGTTTTCTGCCTTCATAAGAAGGCCTGCACCGTGGCTGAGATCTACATGAGCAACCTGGCTGCTGCTGACCTTTTCTTAATGGCGTGCTTGCCTTTGTGGGCTGCATATGCAATCAACAGATACGACTGGCCCTTTTCTCATCACCTGTGCTCACTGTTCCCCCTTTCTATCAACATGAACGCTTACTGCAGCATCTACTTCCTCGTTCTGATTAGCATAGATCGCTATATTGCACTGGTGAACCCGCTGTCCCATAAAGGAATAAGGAGGAGAAAATTTGCCAAACTGGCCTGTCTGCTTGTGTGGGGTTTCGGCTTGCTCCTGAGCGTCCCCACAGTTGTGTACAGGAAAGTGTTATACTATTCTCAATTTAATAAAAGTTTATGCATTCTTAATTACAGAGATATCAAGGAACACCTCCTGTTTAATGGGATGCAGAACACATTCGGTTTTATCATACCCATTTGCATCATTTCCTACTGCACTCTCATTATTATTCACTCTCTGACTAACCGGTTAAGTGAGAGGTCAAACAGCCAGAAAACGGAGCAGAAGCCCACCACTCTGGTGCTGGTGGTTCTCTTGGCGTTTGTGATTTGCTGGGTGCCACACCACGTGGTAATGATACTGGAAACCCTCAGCCAAGCTAATGTCCTGAGAGGATGTAGCATCATCGCCAACCTAGAGATCTGCCGCCCAGTCTTCATGTACTTAGCTTTCTTCAACAGTGTTCTTAACCCCATCCTCTACATCATCGTAGATAAGAACTTCAGGAAAAAAGTCAGGGGTCTCTTCAAGCAATGGAGCATTAACAGAACAATGACCGTCAGCACCACCTCCACAGGCTCAAACATGTTAAGTGTTGAAACTGAAGAAAACTCAGTCTGATCGGCAGGATTGTTTTAATGaggtttttttattcatttattttatttcacataATGAACAATGAAATTATTAACCATTTTCACAAAAGTAAGATAAGAGAACTATTTGAAGTAATACTTATGTAATCTGAATTCACATTAAATAAGACCCTGCTCAATATTGTGAGGTTTGAACTCCCTCTTTGATTGGGACATACTGTAACCCTAAAAGAATAAAAGAGGAGGGAAGTCTTCTGCGGAACATAATTCGGCCTTTCTTAATAGTGTCCTGAACCCATGGACAGGCAGCACTCCAGGAGGAAAGTTAGGGAGAAGGAGGGCGAGACATCATCACAGATGATCACACACGGCCAGACATCAACACTCCTCACTGGTCATATCAACAGACCAGAGGAAAGCGTGACCATTTTGAATGCATGGGAGAAGATGTAACTCTTTCGTTAGAAGATATGGGACTCAATTTACCGTATATGCCATTCTAACACTTATGCCCTAACTGTTGTTTCGTTAGAAATGCTTTCAGACTTAATAGAATAATAACACTGCTACATAATTAAACAGCATTACCAGATTGTGTTGTATATTGCAGAAGTAATGGGCATCAAACTAAGATAATGGAAGTAATGTACAAAAGAGATGGACACAGacgttgtgtctctgtgtaacagCAAGGTCTTTATATGTCACtttaatgtctgtctgtgtctctgtactGTTACATGGTGTTGCTGTTACTGTCTTGTCATATTTTACTGTTGAACACccaaaaacaaatatgttataATGTATTCTCCCTTCTGTTTCTGACATTGTAACTCATCTATCCTTTCTTTGACTCCAACATAAGAGAATGGCAACCTACACACTGCGCATACATTTGCATGTTTGTACAATTTGTTGCTTTGTACAGTTTATTTACACTTCAAAGTCACAGTAGCCTGACGAGTAGTGACTCACACAGTCATGTTGGTATTTCTTTACAGTGTAAACAACCATCACTGTTGCTGAAACATCTGTGTAAATGAACTATTTGCAACATTCATTTAATGCGATACCTGGAGTGGCATAAATGCAAAAACGTAATCTTACAAATAAACTTACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039794264.1 True 2271 mRNA 0.41 3 13285241 13294261

Neighbor

gene id symbol gene type direction distance location
pdcd7 NA coding downstream 36825 13240686 ~ 13248416 (-)
ubap1lb ubap1l,LOC107685210,LOC106932412,LOC103156499,LOC105938593 coding downstream 46989 13208329 ~ 13238252 (-)
rasl12 NA coding downstream 86605 13188414 ~ 13198636 (-)
vstm2b vstm2b coding downstream 792070 12489220 ~ 12493171 (-)
LOC120555959 NA coding downstream 1106570 12157744 ~ 12178671 (-)
chst1 chst1 coding upstream 108063 13402324 ~ 13406615 (-)
LOC120555520 NA coding upstream 429332 13723593 ~ 13727470 (-)
hsd17b12b hsd17b12,LOC103367509,LOC108234813,LOC106951467,LOC102212771 coding upstream 673453 13967714 ~ 13995315 (-)
ttc17 ttc17,LOC103361721 coding upstream 723291 14017552 ~ 14048294 (-)
trpm5 trpm5 coding upstream 767775 14062036 ~ 14090460 (-)
G27135 NA non-coding downstream 35101 13249904 ~ 13250140 (-)
G27133 NA non-coding downstream 36078 13248744 ~ 13249163 (-)
G27108 NA non-coding downstream 113811 13170457 ~ 13171430 (-)
G27063 NA non-coding downstream 261156 13023855 ~ 13024085 (-)
G27062 NA non-coding downstream 261616 13023199 ~ 13023625 (-)
LOC120555270 NA non-coding upstream 84769 13379030 ~ 13391141 (-)
G27178 NA non-coding upstream 104742 13399003 ~ 13399374 (-)
G27189 NA non-coding upstream 326302 13620563 ~ 13620851 (-)
G27196 NA non-coding upstream 381711 13675972 ~ 13676503 (-)
G27204 NA non-coding upstream 393580 13687841 ~ 13688228 (-)
G27075 LOC104939823,LOC100707594 other downstream 189475 13069996 ~ 13095766 (-)
G26924 LOC108281047 other downstream 980417 12304539 ~ 12304824 (-)
G26891 NA other downstream 1323469 11960701 ~ 11961772 (-)
LOC120555651 NA other downstream 1615972 11643231 ~ 11669269 (-)
mtfmt mtfmt,LOC102776665,LOC102776373 other downstream 1774941 11476506 ~ 11510300 (-)
G27321 NA other upstream 1175497 14469758 ~ 14470345 (-)
LOC120556476 NA other upstream 1283766 14578027 ~ 14580011 (-)
G27420 NA other upstream 1548452 14842713 ~ 14843905 (-)
cfap70 LOC103368539,LOC102222702,LOC102790175,LOC102296598,LOC102204478,LOC104922799 other upstream 1756401 15050662 ~ 15078830 (-)
LOC120556162 znf609 other upstream 2777308 16071569 ~ 16159882 (-)

Expression


Co-expression Network