LOC120555523 (LOC103359460,LOC102291763,LOC102215599,LOC101468151)


Basic Information

Item Value
gene id LOC120555523
gene name LOC103359460,LOC102291763,LOC102215599,LOC101468151
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 19459171 ~ 19495413 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039794265.1
GGAGGTGAAGCAATCCTTAATTGGACTCCGCGTGTAAATGGTCTTTCACCAGCTTCCTGTGGATTTATGTGAAGACATGCAGGCATCAAAGAAGACTTAAGAGCAGGCAGTATAGGCTGCGAAGCAACAGCCCAGCTATGTTCAGAGCAGTGTTTGGAAACAAGAAAGatggaggaggaaaaggaggagaaaaaaagaataagggACATCCAGGTGGTGAGGTGTACACTCACAGCACCTTGCAGAGGGGAAGTGCCGGGCGTGCCAAACACTTCCGGGACCATGACAGTGGCTACACTGAAAGCCCGGTAAAACCGAGGAAGAGACTGACCAAGGTTGCGTCCATTTCTTTACCGTCCTCCCCGCTTCTCCCTCGCCAGGCCGACATAGTTCCCTCCCAGTCGTGCATCAAGTTCACAGGACGGGTAAGGAAGCTGGAGTTTGTGGATGGCTCTTCCAACGCGAGAGAACCTCTTGTCTTTGCCTCGTGCCGTGGCAAGACAGACCACAGAGACCTCCACGTGGAGCCCCAGCCGGGCTCCTCCCTTTCTACCCAGGAACTGATGACCAGACTATGCTTCTTATTGGGAGAAGCAACGCCCGGCACTGCTAGCTCTCCTATGGAGGACAGGAGGGAAAAGAAGTGTGATACCTCTGCCCAGGGGGGGAGTCCCAGCTCCACTCTTACCTGCAGCACTGCCTCCCCCTGTTCAGAGAGCCCCTCTTCCACCCTGAGCactagtgctggaggccagccTTTTCCCCAGCCTTTACCCTTACCTTCACCCCACTGCAGCTCCAGCACCAGCCCCAGTGGAACCCTCTCCAACTCCGTACCCAGTTCTGCTCCTGGACCCATCACCAGGAGCAGCCCTGGGCCTCCTTCTCAAAGCCCCACCTCCACCCTGGGGAGCAAGGACAGTGGAATCATAGCAACCATCACTAGTTCCTCTGAGAATGAAGAGCGCGGCGCCTCTAGTGAGGTTCTGACTAGGAATAAAAGCCCAGGGGGCGGTGCTGGTGTAATGGGCCATGCAAACGAGGACCGCCATCCCGGGCCAACAAGGGACAACCTGACCACCCAACCAGATGAGGCCTTACCTAGAACTGACATCATGGAGCCCAGGACTCCACCAGCACCGAAAAGACCCCTCCCACAGCACCACCTACACAGCACTTCCTCCCTTGTGATGCCCCGTCCAAATTCTGTGGCAGCAACCAGCTCCACTCGACTGGACGATTTGAGTTATCTGGACAACCACAGGGCTGCTGGACACAGGAGCTCCGTCCgcaaacacaacacagctgGACGCACAAATGATGACTCCAAAGGGAGATTAGTGCCATTCAAACAAGCTGACATCATGCTAAAACCGCTGCTGTTTGAAGTCCCCGGCATCACCGCAGAGACACCTTTTGTTGGCCGGGATTGGCTCTTCACACGTCTGGAGGAGGTCCTGAGAAAAACAAGCAGCTGTGAGGGCCGCGGTGCCGTCATTGTGGGTAACGCAGGATCCGGCAAGACTGCTATCATCTGGCGGTTGGTGACGCTCAGCTGTCATGCCATGCACACGCCACAGGGAGGTCCCAGCATCCCTCACAGCCCCAGCACCTCCCCTAAATGTGGGGATAAGCAGGGAAAAGCCGCCTCCAAACCAGCTGATTCCCAGCTTAACCAGAGTGCTGTTGCAGGAACAAGTGATGCAGCACAGAGGAAGGAGGTTGTCAGATGCCTAGCTGCCAAGGTGGTAGCCTATCATTTCTGCCAGGCTGACAACACCTACACCTGCCTGGTACCAGAGTTTGTGCACAGTGTCGCCGCCCTATTGGCCAGAGCGCCACAGCTCGCCCCGTACAGGGAGCTGCTGGTACAAGAGCCTCACCTACAAAACACACTCAGCCTGCGATCCTGCGTTCAAGACCCCATTGCTGCCTTCCGAAAGGGCATCCTGGAGCCCATAGCCAGCCTGCGCAAGGAGCGCAGACTACCTGAAGAAGACTACATCATATTGGTCGACAGCCTTAATGAGGCAGAATTCCATAAACCAGACTATGGGGACACCATTGCCACTTTCATTaccaaaataatctcaaaatttCCCATCTGGCTGAAGTTGGTGGTCACGGTCAGGACAGGCCTGTTGGAAATCACTACACTTCTTCCCTTCTCTGGCATCTCTCTGGACATCCTGCCAGACAGCAGTGATCTGGGAGCTGACCTGAGTGACTACATCCATCACCGGGTCAGCAGCAGCACCCAGGTCGCCGCTAACGTCACCACACCCACAGGCTCGGCCCCTGATCAGCTGCTCCTCAGCAAGTTCAGCAGCCACCTGTCAACACGGAGCAACGGCTCCATCCTCTACCTTCAGCTGACCCTGGATCTGTTTCACAAGGGGCACCTGGCTCTGAAAGGTGGAAACTACCTGGTGGTGCCTGTGTCGCTGTCAGAGGTGTACCTGCTGATGTGTCACGTGAGCTTTCCGGATAAAGAGGTCTTTGAACGGGTACTTCCGGTGCTAAATGTGGCACTGGCGTCTCTGCACCCACTGACTGATGAACAAATGTTCAGGGCGCTGAATGCAGGCAGTGTGAGGGGGGAGCTGGAGTGGAAAGACTTCCAGCTGAGATTAGACAGCCTGGCTGGATTTATGGTGAGACGTAGGGATGGCACCCGGATGCTGTGTCATCCCTCCTTCAGAGAGTGGCTGGTTTGGAGAGCAGATGGAGAGAGCAGTGACTTTCTCTGTGAACCTAGGAGTGGCCACGCTCTCCTGGCCTTCATGTTCTCCAGACAGGAGGGCAAACTGAACCGGCAGCAGACAATGGAGCTGGGACACCACATCCTCAAGGCTCACATATTCAAGGGTCTGAGTAAGAAgacaggtgtgtcctccagcgTTCTTCAGGCAATGTGGGTGAACTGCAGTACAGACAGTCTGTCCGCTGCGCTGGCCTCCCTGAGGAACCTATATACACCTAACATCAAGGTAAGTCGTCTGTTAATGCTAGGTGGCGCTAGCGTGACCTGGTGTACAGAGGTGGTTGGACATGCCCCAATTCTGGCCGTCCACGCCCACCTGGGGCATGTGGAGATGGTAGCTCTGCTGCTTGAAATGGGCGCGCCAGTAGATGGGACTACTGACAGTGGCATGACGCCCCTCTGTCTGGCCGTCGCTGCAGGACACGTCGACATCGTCAGCCTGCTCTGCAAAAAAGGGGCCAAGGTGGGCCTTGCTGATAAGACTAGCCAGTGTGCGCTGGTCCATGCTGGGCTGAAGGGCCATGCAGAAATCATCAACATCTTGCTGGGCCAGGATTGGGGAGCAGATATCCCCACTGACCCACAGCAGCACCACAGCAATGAAACTGTGACTGGGAAAACACAGGCAGCACAGCAGGCGATTACAGCCGCAGCTAGTGtgggacacacacagGTGGTGAAGAACTTGCTGGACTTGAAAGATGAACAGCTGGCAGTGCAGATGGACGCTCACGACTCTCTCTGGGGAGAAACGGTGCTGAGCGCGGCAGCAGGAAGAGGGAGGATGGAGGTGTGCGCGTTCCTCCTGGAGCGGGGGGCAGGGCTGGAGATACCCAACCGCAGGGGGATGGTCCCGCTGCTTAGTGCCAccaaacatggacacacacagATTGTAGAGTTGCTGCTAAAGCAAGGTGCCGATATTAATGCCACCGAAAAGCAGGGTCGCAATGCACTGATGCTGGCTGCCTCTGAGGGCCACGTGAGCACTGTTGAACTCCTGCTGTCAAAGGgtgcctctctctcctctgccgaTCAGGATGGGCTGACTGCACTTAGCTGGGCCTGTATGAAGGGCCAGAAAGATGCAGTGCAGCTTCTGGCAGAGGCAGGCGCAGACCTGAACCaaccagacagacagggacGGACTCCTCTTGACCTCTCTGCCCTTAACGGGGATGCAGATACAGTGCATTGCCTGGTGGAACATGGAGCGGTGCTGGAGAGAGCCGACAACAACAGTACCAGAGGTTCAGATCGGACGACTGGCTGCCAGAATCCGACTCTGGTGGCTTCGGTGCTTAAGAAAGGATCCAAGATGGGCTACAAAACGGCTCCACACGATCGATCAGGTCATGCTACGTGGGCTATGGCTTCCTCCAAACCAGACATTCTCCTCATCCTGCTGCAGAAGCTGATGGAGGAAGGGAACATGCTTTACAAGAAGGGACGTATGAAGGAGGCAGGCCAGCGTTATCAGTATGCCCTGAGGAAGCTACCTCGTGAGGGGCAAGGAGAGGAGCTGAAAGGGCTCAAAGACCTGCGGGTCTCCCTCTTTCTAAACCTATCCCGCTGCCGCAGGAAAACCAATGATTTTGGCATAGCTGAAGAGTTTGCAACAAAAGCCCTGGAACTCAAACCCAGGTCTTATGAAGCGTATTATGCCAGAGCGCGTGCCAAGAGGAGTAGCAGGCAGTTTGCTGCAGCGCTGGCAGACCTCCACGAAGCAGCACGACTCTCCCCGTCCAACCGGGAGATCCGGCGCCTGCTGGTCCGGGTAGAGGAGGAATGCAAACATCATCAGAAGGCATCCATCAACAACATGGCACAGGGTTACAACAGGgacccacacacccaccaccATCAAGCCGCAGAGGAGGAGGTCGACATCTATTCACAGGGAAGTCTAGAGAGGCAAGTCCCCGCAGAGCACACTGATgtagagaaggaggaagagaaggaggaaggcGAGGAGGCGAGCCTGCAGTGTGGGAAAAGTCCAGAATTTTGGCCTCTGAATCCGTACGGTCCAAACAGGACTCTCCCTGGAGGTTTGGCCTTTGGTCCAACAGATCAGTTGCCATGTTTCCCACAAGAGGAATATGTGCAGAACCAACTGTTTGTGGACATGCCCGAGTCTGTTCCTGTGATCAACAGGCAGACCCAGAACCAGGGACTCAGCAGGACTCATCACCACTGCCACTCCCTCCAGTCAGGGAGCAGAGTTGGGGGCaggcctctctctctgtgtggccCCTCCAGTCCTCTGCCAGGCAGACACATCTCCACCTCCCTAAGGCCTGCACCGGTGCTGGGTATTGACATCGGCCATGGATTAGCCAACGAACACTCTGGACACAGCCCGACTGAGCTCTATCACCCCATGTCCCCTAACAGCTCCTCCCCACCTGGGCCACTCCAGATGTACCAGCCCCGACCCTCCGGCTTCTCCCGGGGCTCCGAGAGACTCTCCAGCCACTCTGGGGCTCTGGATGGCCTGGCTCTCGCTCTGGGGTCTGGTATGGAGGTTAGGAGGGagggtggtggaggaggaggaggaacagcAGGCTCAAGGGGCTCCAGCTCCAGTCAGGCCTCCAGTGGGAACCTGTCAGACGGCGGCAGGCAGCAGGTGCCGGACGCCCCGTGCCCCATCAAGAGCAGCGGTAGCTTCAAGTCCAAACCAGAGCTAAAGCCCCGACCCTTCATGGGAGTAATGGACAAATCAGTGCGAGTCCAGGGCCAGCAGACCTCCGGCCTGAGCCGACAGGGACAGGGAGGAGGGCTGGAGAGTTTCAGTATGTCAGTAATGGAGTTTCAAGGGCTAAACAATGAATTCAAATGCCCGTCATTCCAGGAGCAGCTTTCTGTAAGTCAGGCCAACAGCCAGCAGCAGGGCCGGGAGTTTGGAGAGCGGCTCCACCAGCGAGAGGCTAGAGGCAACGCGTCCTCCCAGCTACGCTTCCCTGACGGGAGGCACAGACAGGCGAGTCTAACGAGAGACAACCCGGCTCTGCACATGGCTCCGATCAAACCCAAGCGCTCATTTATAGAGTCCAACGTCTGAATATATTACTTTATAAAAGCACAGACACAGGCTGTTTTCAAGAAACTATGTCCCACATAAGGTAGCAAGGGAGACTGGTTTGAGAACAGCTCCCTTCCCTGAGCCTGTTTTGTAGAGTTATGCTGCTGCACTGCATTTACAATCTAGAACCAGTGTTCAACTCAGGCTACTATGCTTTTGCTTACATGTCTACAGCTACACTAGTGTATTGAAGAAAACCAGACATACCTTAAGTAGGGATTTCAAAAAATGAGTAGAATATTGTCTCaacttttaatttattataacaAATATAGAAATCAGAGAAAGCTTTGTGCACAAATATAAAAAACCTCATGCTATTAGTTGCTGGATATGACCATTTCTATTGTCAAGtgtcttttaaaaaacatttatatttgtACGGTGTACACTATATTTGCAGATTATATATTTCCCTGTAAGTGGTTATCTGTCTGCATTACAGGCTTCAAAAGAAATTACTTTGTGTGCTTGAGATTCTTTTTCTTGGTACAATTTGATTAAAAAAGGAGCTGTACATGACATTGTTGGAAAACTTCTTATCATAATCTAATATTGAATTGATTGCTTCAATACTTACAGTATATGCTATTTATTTTTGCATAGCAGAGAACATATTCATATGAAATGTTTACTGGTTTGTttggagagcgagagagagacagagagagacacggAGAGAGCTTTTATACAAGCAGCAGTTGAGGATAGAAAATCTTAAGAGACTTCGTACTTTGCTGTATGTCCATAGTTGTCATATACCCTTTTCAGAGTCATACTACAGATTACAGAATGTTGCCACATTATTATTGTggtataataaaatattaatgGGTACCACATTTCTACATCTACTTCTTTCACTGTATAATCCATAAAATGTTGCCTAAGCTGTGTATGGATGGATAAAAGGATTCACAGTACAACCTAACTCTAAACTGACATTTAACCACGCCATCAGAATAAAGTACTTGTATAAAAA

Function

NR:

description
PREDICTED: protein TANC1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039794265.1 True 6834 mRNA 0.53 29 19459171 19495413

Neighbor

gene id symbol gene type direction distance location
marchf7 LOC104963329 coding downstream 100804 19343424 ~ 19358367 (-)
psmd14 psmd14,psde,LOC107563735 coding downstream 226331 19227639 ~ 19232840 (-)
fn1b fn1,LOC103359471 coding downstream 251528 19182528 ~ 19207643 (-)
LOC120555913 prss23,LOC103365183,LOC104967790 coding downstream 429934 19025898 ~ 19029237 (-)
grpr grpr,LOC103365195 coding downstream 508901 18942607 ~ 18950270 (-)
gtf2f2a gtf2f2 coding upstream 5116 19500529 ~ 19508532 (-)
gpalpp1 gpalpp1 coding upstream 13272 19508685 ~ 19511713 (-)
LOC120556479 NA coding upstream 758300 20253713 ~ 20279186 (-)
tdrd3 tdrd3 coding upstream 980214 20475627 ~ 20497725 (-)
pcdh17 LOC104926281,LOC104949434 coding upstream 1425531 20920944 ~ 20990225 (-)
G28558 baz2b non-coding downstream 23458 19420548 ~ 19435713 (-)
G28557 NA non-coding downstream 40736 19417412 ~ 19418435 (-)
G28552 NA non-coding downstream 49669 19351997 ~ 19409502 (-)
G28545 NA non-coding downstream 127656 19330490 ~ 19331515 (-)
G28516 NA non-coding downstream 164861 19292974 ~ 19294310 (-)
G28623 LOC103359454,LOC100700192 non-coding upstream 34159 19529572 ~ 19531634 (-)
G28632 LOC102784954 non-coding upstream 54714 19550127 ~ 19551890 (-)
G28637 NA non-coding upstream 62265 19557678 ~ 19559314 (-)
LOC120556360 NA non-coding upstream 78906 19574319 ~ 19600624 (-)
G28670 NA non-coding upstream 428322 19923735 ~ 19923998 (-)
LOC120555836 pcnp other downstream 332760 19123541 ~ 19126411 (-)
LOC120555695 NA other downstream 389175 19054091 ~ 19069996 (-)
G28345 NA other downstream 739152 18719372 ~ 18720019 (-)
LOC120556268 btbd1 other downstream 800512 18650029 ~ 18658659 (-)
G28269 mapk6 other downstream 1038672 18416069 ~ 18420499 (-)
LOC120555658 NA other upstream 2084555 21579968 ~ 21583558 (-)
G28933 NA other upstream 2085629 21581042 ~ 21583498 (-)
gpc6a LOC101477426,LOC100710496,LOC102798074,LOC103365236,LOC102217784 other upstream 2391175 21886588 ~ 22051625 (-)
LOC120555944 LOC103365297,LOC100709700,LOC102795695,LOC102312860 other upstream 2775457 22270870 ~ 22336817 (-)
cbfa2t3 cbfa2t3,LOC102789151 other upstream 3053287 22548700 ~ 22601557 (-)

Expression


Co-expression Network