LOC120555527


Basic Information

Item Value
gene id LOC120555527
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 12556047 ~ 12562553 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039794273.1
cagaTGCAGATGCAGGATACTATCCCTGATCACACTGCTGATCAAGAAGATCTCACTGCATTTATCTCTCAGAACCAGtATTCACCAATGCCTACTTTTCTGGAGAAAATGATGGAGATTGTGCCTAGGGCACTGCCAAATATTCCAGAATCTATCCACAGCGCTATAATTGATAGAATTGTAAATGCTGGCGGCTTTACATCAATTAAAGAACTCAGATATGTAAAAGAGGATGACTTTGCAGACTTACTGCCTCTTGTAAGACGACGACAACTTTTGGAAGTATTCCAAATAGagAGTAAAGTGATCACAGTAAACCTTGAAATCGTTCCATCCTCCACCACCGAAGTCAGCAGCAACTGTCTATCAATCATCAGTCCATCTAGAAGTGAGGACAGCCCGTCTGCCTCCCAGCCTGTAAGGAAAACATGGCCAGAGTCTTTTAAGGTGCCATGGGACCTTATGCCTGCGGAGATTTGCACTGCCATTTCATCTTGTAAGAGACCTTCACCAGGTGCACGACGGCAGATGGTCAGGATAATGTCCGATGAGATGAGGAAGTATGAGCTGAATCCAACACGAGCACAGTGCCTTGTAGTTTGCCGGAATATCGTTCACCAGTACCCAGAAAGTTTCGCCGATCAGCGAGACAATGGACAGCTTCTAGATGGTGGATATGCATCTCTGCTGATTCAAGTGAAAAATCGCATCGAAAATCTGAACCGTGCAAGCAGTTTTCATCAGCACCGTTCAGCTAGCCATGGACAAAAGAGAGGGCCTACTGATACATACGGATGTACAAGATTCCAGCCCAGCCTCCCTACAGAAGAGACTGAGGACACAATGGAGACCAAGCGTCAACAACTGGAAGAGATCTACAGTCAGGATGGCACAGCTGGTGCTGAGAGACCACAGGTAAAGAAGCTAATGGATTCTACTTTCTACCTGCAGCGGTCCCACATCAATGTTGTACCTACACCAACCATTGCAACTTTAAAAGCAAAGTGGCCGTACTTGTTCAGTCACAAAGGACTATACTCCCACTTTGAGCTTCTTACTGATATTCCTGTGCTGCGTAGCCTTGACCTTGCCATGGAAGAGTGTGGCAAAGTGATTGTGGAAATGTTCAAGACTAAACCGACAAATGCAAGGATGAAGGAAGTTCTTCGTCAGCTTGATGATGATGTCGAGCTGTCCTATCAAGTCATCCATCTTCTTCTGTCTCACTTTTCCGAAGATGTCTCAGGACTCATTGTTCTTGCAGATGGATATGCCACTGCAGCTGACCTCGAGAGTTCACTCTCTTTACCTGCAACGCCTCGTCTGATACTTCTTGGAGAAACAGGAAGCCGCTTCCAACGCTGGATGCTCAGCATTGAGGGCCAGATTGTGTGCGAAGGGATCCAGTCCACCTTTGTGACAGGGCTAGCGTcttttttctcctgtttttacATCTTCAACCTACAGTACCAAGAGGAGGCAGCCTGCACACTTGAATTCATCCAGAGACGCTTTGTGGGCATAAACCCAGAAAAAGGGACAAAGGCTGCAAAGGGGAAAAAACGAAGAACGGTCAATTCACACGTCGCCAGCCTCTTGCGCAGACTCATGGACTTCCAGTGGGATTTCATTTGAAAAAGACCCAAGACTTTCCAAAGGATCCTCATTGTGTGCTTTGAGAAAATGGTTAGTGGTCTATGCAGTTacagtgtttttattgtttattgctCTTTATTGACCAGGAGTTCCAGTTAAGAGTTAAGTCTTGGCTTGAATGTATTCATACATGTTGAATTTCAGTGGTTTGGTTAACATTAAGTGTTGAGGTTCAGTATTTTGTTATAATGAACAAtgtatgtgtttaaaaaaatgtatttgctacTTTTTAAGCCATGAACATGAGAACATGAGATTTACCTGTGATTAATCAGCCTATGTGTAGCATTTTTGAGTGACCAGGAGTCAAAGGGAATGTCCTTGGTTTGAGTCTTTTTTGCATAATTTTAGCAGTTCAGGGAACATTAAATGTTGTGGTTTAGGGCCATAtcttgctagtttaagaccaacgcagttgtcaatttcgcATCcggcgcccgcgtcgtttaaatagcaaattcACCTg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039794273.1 True 2122 mRNA 0.44 7 12556047 12562553

Neighbor

gene id symbol gene type direction distance location
LOC120556595 NA coding upstream 524319 12031621 ~ 12031728 (+)
minar1 kiaa1024,LOC107562943,LOC102799073 coding upstream 1417649 10934633 ~ 11138398 (+)
LOC120555826 NA coding upstream 1424575 11129921 ~ 11131472 (+)
shcbp1 shcbp1,LOC104947898,LOC104967817 coding upstream 1715898 10789845 ~ 10840149 (+)
LOC120555949 NA coding upstream 1810721 10741710 ~ 10745326 (+)
LOC120556313 LOC104939823,LOC100707594,LOC101479997,LOC105924362 coding downstream 503399 13065952 ~ 13071332 (+)
LOC120556474 NA coding downstream 526982 13089535 ~ 13091435 (+)
si:cabz01068815.1 NA coding downstream 581954 13144507 ~ 13176403 (+)
kbtbd13 NA coding downstream 642286 13204839 ~ 13208335 (+)
spg21 spg21,LOC102788283 coding downstream 689612 13252165 ~ 13271218 (+)
LOC120556331 NA non-coding upstream 59885 12495645 ~ 12496162 (+)
G26939 NA non-coding upstream 175395 12380329 ~ 12380652 (+)
G26922 NA non-coding upstream 272415 12283382 ~ 12283632 (+)
G26915 NA non-coding upstream 320290 12235516 ~ 12235757 (+)
G26913 NA non-coding upstream 345185 12210590 ~ 12210862 (+)
G26967 NA non-coding downstream 255 12562808 ~ 12563225 (+)
G26975 NA non-coding downstream 7678 12570231 ~ 12570511 (+)
LOC120556106 NA non-coding downstream 24613 12587166 ~ 12592629 (+)
G26979 LOC104961098 non-coding downstream 36396 12598949 ~ 12599482 (+)
G26980 NA non-coding downstream 37088 12599641 ~ 12600287 (+)
lto1 oraov1 other upstream 643325 11903272 ~ 11912722 (+)
aldh1a3 aldh1a3,LOC106562593,LOC103357544,LOC104941118 other upstream 2696047 9814697 ~ 9860000 (+)
asb7 asb7,LOC102792420 other upstream 2879020 9653578 ~ 9677027 (+)
adamts17 adamts17 other upstream 2951585 9391108 ~ 9604462 (+)
cers3a cers3,LOC102798777 other upstream 3177436 9333229 ~ 9378611 (+)
G27086 NA other downstream 547204 13109757 ~ 13110339 (+)
LOC120556202 NA other downstream 672682 13235235 ~ 13237819 (+)
slc35c1 slc35c1 other downstream 1108924 13671477 ~ 13676613 (+)
lrrc4cb LOC104946080,LOC107396660,LOC103367510,LOC108234802,LOC101071141 other downstream 1247382 13809935 ~ 13856423 (+)
bbox1 bbox1,LOC102798250 other downstream 2146009 14708562 ~ 14735176 (+)

Expression


Co-expression Network