LOC120555529


Basic Information

Item Value
gene id LOC120555529
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 6070600 ~ 6079167 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039794274.1
TTGGAACACTCCCCagtctgctgctgttgctgtccTATAACCATGATGCTCCAGGCGGCTGTGCTCAGtgtcctcttcttctctgtccACAGTTTTACTATACAGGCTTCCTTTGAAAAGCGTGACGAGAACTCTGGCAACACCATTGAAGATGACGATTTCAGTGTGTCCACGCTGTTAGAGAAGGCCAATGTTAATCTTGGAAAGAACTTTGATGACCCTCTGGTGTTATTTGGAGACATAGCAGTGCCAATAGGTCTACAGAACGCTGATCCCTGCACAGCACGAGGCTGCCTGTGGCCTAAAGCCACCGACGGCAACGTCTATGTACCCTACCGCATCTCCGATGAGTACTccacaagagagagacaaaccaTTGTCCAAGGCCTGCAGTCCTTTGCGCAGTCCACTTGCATCCGCTTCACCCCCTTGTCTAACGGACAGAGGGACTTTGTGGACATCCAGTCTCTCGGAGGGTGTTTCTCATATATTGGGCGTCGTGGTAATGGCCAGGTAGTGTCTTTGATGCGCCAGGGCTGTGTTTTCCTGGAGATCATCCAACACGAGCTGCTCCACGCCCTGGGCTTCCACCATGAACAGAACCGGTCAGACAGGGACGAGCATGTTCGCATCCTGCTGCAGAACGTCATTCCTGGATTGGAGTCCCAATTCACCAAGGTCCAAACAAGGAACCTTGGCACTCCCTATGACTACGGCTCTGTCATGCAATATGGAAGGTTTGCCTTCTCTAGTAACAGGCAGCCAACCATCGTTCCTATCCCCGACAACAATGTAGCCATTGGCAGAGCCACCCAGATGAGTCCTAATGACATCCTTCGGGTGAACCGCCTGTATGGCTGCAATTCGACTGCTTCCAGACATTACTTGAAACCTGGCCAAAGAAAGCATTTCCTCTAAAAATGAAAGAAATCCAGAGCAAATGAGGCAAACAGATGAAATGTTTTACAAGCAAAACCAGAAATGCATCTTGTGCTTAACGAATGTGCTTTTATTCAGAATTTGATCAAATGAACTTGCATGCTGTCCTAATGAGAAATGAAGTGTCCAATGACATCATCACAAATAATGCAAATATCCACTTTGAGCTTGAttactaataataaataaaacatgcttATTCGCATCATAA

Function

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0004222 metalloendopeptidase activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039794274.1 True 1150 mRNA 0.47 10 6070600 6079167

Neighbor

gene id symbol gene type direction distance location
LOC120555530 NA coding downstream 3374 6060618 ~ 6067226 (-)
LOC120555531 LOC106909328 coding downstream 19911 6038425 ~ 6050689 (-)
si:ch211-260e23.9 LOC104921431 coding downstream 407346 5653454 ~ 5663254 (-)
ccne1 ccne1 coding downstream 427196 5630622 ~ 5643404 (-)
znf536 znf536,LOC102211462 coding downstream 726392 5058534 ~ 5344208 (-)
LOC120555532 NA coding upstream 35044 6114211 ~ 6126128 (-)
LOC120555533 mnep,LOC103369663 coding upstream 66262 6145429 ~ 6153413 (-)
LOC120555536 NA coding upstream 104465 6183632 ~ 6193536 (-)
LOC120555535 NA coding upstream 155013 6234180 ~ 6241650 (-)
LOC120555542 NA coding upstream 198970 6278137 ~ 6281524 (-)
G25674 NA non-coding downstream 164933 5905356 ~ 5905667 (-)
G25672 NA non-coding downstream 185439 5884844 ~ 5885161 (-)
G25667 NA non-coding downstream 192582 5876253 ~ 5878018 (-)
G25646 NA non-coding downstream 255916 5814479 ~ 5814684 (-)
G25644 NA non-coding downstream 263502 5800797 ~ 5807098 (-)
LOC120555539 NA non-coding upstream 43880 6123047 ~ 6125990 (-)
LOC120555540 LOC107712283,LOC107746645,LOC107663761,LOC107662224 non-coding upstream 130727 6209894 ~ 6211078 (-)
G25759 NA non-coding upstream 174156 6253323 ~ 6311134 (-)
G25769 NA non-coding upstream 234816 6313983 ~ 6314207 (-)
G25795 NA non-coding upstream 327221 6406388 ~ 6406597 (-)
LOC120556425 ap2a2,LOC104921433,LOC104965011 other downstream 353167 5680042 ~ 5717433 (-)
G25228 NA other downstream 3793509 2275475 ~ 2277091 (-)
cep89 NA other downstream 4329761 1664770 ~ 1740839 (-)
LOC120556047 abcc12,LOC102304683,LOC101479372,LOC102203605 other downstream 4428252 1587544 ~ 1642348 (-)
LOC120556048 abcc12,LOC101479372,LOC101076737,LOC102203605,LOC100701509,LOC102304683 other downstream 4514954 1510165 ~ 1555646 (-)
LOC120555534 LOC103369663 other upstream 77055 6156222 ~ 6167529 (-)
ankdd1a ankdd1a other upstream 244110 6323277 ~ 6346561 (-)
pop4 pop4,LOC105418436,LOC104960843 other upstream 430092 6509259 ~ 6524355 (-)
tpcn2 tpcn2 other upstream 454875 6534042 ~ 6590639 (-)
dok4 dok4,LOC102198948,LOC100694825,LOC102775855 other upstream 562997 6642164 ~ 6693331 (-)

Expression


Co-expression Network