LOC120555530


Basic Information

Item Value
gene id LOC120555530
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 6060618 ~ 6067226 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039794275.1
CCACACAGAGGAATCCAAGGTCTGCTAGGATGGCTCGCATGTCTGTTTTCAGATTCTCAGCTctggctctgctgctgctgtctgccTGCTGTTGGGCCGACAATGAGgcAGAGGATGACTCAGCGGAGCTTTCTGTctctgaacttctggagagagccAACAGTAATCTGATCCGTTCTGACAATGATCCCATCCTGACTGGAGGAGACATCGCCATTGGCAGCGAGGACGAGAGAAACGCCGACCCCTGCACCAGCCAAGGCTGCATGTGGGGCAAATACACTGATGGGAAGGTCTACGTTCCTTATTACATCACCAACCACTTCTCCGACCGGGAGAAGGCCATCATCACCCGTGGACTGGAgtccttctcttccttctcctgCATCCGCTTCAGGCCAAGCAGAAGCAGCGACCGCGACTGGCTGAGCATTGAGTCCCAGAATGGCTGCTACTCCTTCGTTGGCCGTCGTGGTGGGAAGCAGGTGGTGTCTCTGGCCCGGAGTGGATGCCTTTACCATGGCACGGTGCAGCACGAGCTGCTCCACGCTCTGGGCTTCAACCATGAACAGACCCGCTCTGACAGGGACAACCACATCAAAGTCATGCTGCAAAACGTTCAGTCTGgaaTGCAGCACAACTTCAATAAGATCGCCACCCTGAACCAGGGCACTCCCTACGATTACAACTCTGTCATGCAGTACCACAAGTACGCCTTCTCCAAGAACAACCAGCCCACCATGGTCCCCATCCCCAACCCCAACGTGTCCTTTGGCAATGCCAAGGAGATGAGTCGCAATGACAAAGCCAGGCTCAACACTCTCTACAAGTGCTAAGAAGCGTTTTCAGATGTGCTGACAGACGATCAGAGGCTCCCTGACCAACAGAAGCTGCAGCCCTGAACTCATCAGCACAACAGCCAATGATCATTCTATAAAGTTACTTCTACTGGAATGAAA

Function

GO: NA

KEGG:

id description
K08076 E3.4.24.21; astacin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039794275.1 True 959 mRNA 0.54 9 6060618 6067226

Neighbor

gene id symbol gene type direction distance location
LOC120555531 LOC106909328 coding downstream 9929 6038425 ~ 6050689 (-)
si:ch211-260e23.9 LOC104921431 coding downstream 397364 5653454 ~ 5663254 (-)
ccne1 ccne1 coding downstream 417214 5630622 ~ 5643404 (-)
znf536 znf536,LOC102211462 coding downstream 716410 5058534 ~ 5344208 (-)
znf507 NA coding downstream 1685320 4351498 ~ 4375298 (-)
LOC120555529 NA coding upstream 3374 6070600 ~ 6079167 (-)
LOC120555532 NA coding upstream 46985 6114211 ~ 6126128 (-)
LOC120555533 mnep,LOC103369663 coding upstream 78203 6145429 ~ 6153413 (-)
LOC120555536 NA coding upstream 116406 6183632 ~ 6193536 (-)
LOC120555535 NA coding upstream 166954 6234180 ~ 6241650 (-)
G25674 NA non-coding downstream 154951 5905356 ~ 5905667 (-)
G25672 NA non-coding downstream 175457 5884844 ~ 5885161 (-)
G25667 NA non-coding downstream 182600 5876253 ~ 5878018 (-)
G25646 NA non-coding downstream 245934 5814479 ~ 5814684 (-)
G25644 NA non-coding downstream 253520 5800797 ~ 5807098 (-)
LOC120555539 NA non-coding upstream 55821 6123047 ~ 6125990 (-)
LOC120555540 LOC107712283,LOC107746645,LOC107663761,LOC107662224 non-coding upstream 142668 6209894 ~ 6211078 (-)
G25759 NA non-coding upstream 186097 6253323 ~ 6311134 (-)
G25769 NA non-coding upstream 246757 6313983 ~ 6314207 (-)
G25795 NA non-coding upstream 339162 6406388 ~ 6406597 (-)
LOC120556425 ap2a2,LOC104921433,LOC104965011 other downstream 343185 5680042 ~ 5717433 (-)
G25228 NA other downstream 3783527 2275475 ~ 2277091 (-)
cep89 NA other downstream 4319779 1664770 ~ 1740839 (-)
LOC120556047 abcc12,LOC102304683,LOC101479372,LOC102203605 other downstream 4418270 1587544 ~ 1642348 (-)
LOC120556048 abcc12,LOC101479372,LOC101076737,LOC102203605,LOC100701509,LOC102304683 other downstream 4504972 1510165 ~ 1555646 (-)
LOC120555534 LOC103369663 other upstream 88996 6156222 ~ 6167529 (-)
ankdd1a ankdd1a other upstream 256051 6323277 ~ 6346561 (-)
pop4 pop4,LOC105418436,LOC104960843 other upstream 442033 6509259 ~ 6524355 (-)
tpcn2 tpcn2 other upstream 466816 6534042 ~ 6590639 (-)
dok4 dok4,LOC102198948,LOC100694825,LOC102775855 other upstream 574938 6642164 ~ 6693331 (-)

Expression


Co-expression Network