LOC120555532


Basic Information

Item Value
gene id LOC120555532
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 6114211 ~ 6126128 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039794279.1
ACACCCATATAAGTTGGAACACTCCCCAGTTCTTTCTGagtctcctgctgctgctgtcctatAACCATGATGCTCCAGGCGGCTGTGCTCAGtgtcctcttcttctctgtccACAGTTTTACTATACAGGCTTCCTTTGAAAAGCGTGAGGAGAACTCTGGCAACACCATTGAAGAAGACGATTTCAGTGTGTCCACGCTGTTAGAGAAGGCCAATGTTAATCTTGGAAAGAACGTTGATGACCCTCTGGTGTTATTTGGAGACATAGCAGTGCCAACAGGTCTACAGAACGCTGATCCCTGCACAGCACGAGGCTGCCTGTGGCCTAAAGCCACCGACGGCAACGTCTATGTACCCTACCGCATCTCCAACCAGTACTccacaagagagagagaaaccatCATCCAAGGCCTGCGTTCATTTGCGCAGTCCACTTGCATCCGCTTCACCCCCTTGGCTAATGGACAGAGGGACTTTGTGGACATCCAGTCTCGCGAAGGGTGTTTCTCATTTATCGGGCGTCGTGGTAATGGCCAGGTAGTGTCTTTGATGCGCCGGGGCTGTGTTTTCCTGGAGATCATCCAACACGAGCTGCTCCACGCCCTGGGCTTCCACCATGAACAGAACCGGTCAGACAGGGACGAGCATGTTCGCATCCTGCTGGAGAACGTCGAGCCTGGATTGGAGTCCCAATTTACCAAGGTCCAAACAAGGAACCTTGGCACTCCCTATGACTACGGCTCTGTCATGCAATATGACAGGTTTGCCTTCTCTAGAAATAGGCAGCCAACCATCGTTCCTATCCCCGACAACAATGTATCCATTGGCAGAGCCACCCAGATGAGTCCTAATGACATCCTTCGGGTGAACCGCCTGTATGGCTGCAATTCGACTGCTTCCAGACGTCACTTGAAACCTGGCCAAAGAAAGCATTTCCTCTAAAAATGAAAGAAATCCAGAGCAAATGAGGCAAACAGATGAAATGTTTTACAAG

Function

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0004222 metalloendopeptidase activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K08076 E3.4.24.21; astacin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039794279.1 True 994 mRNA 0.51 10 6114211 6126128

Neighbor

gene id symbol gene type direction distance location
LOC120555529 NA coding downstream 35044 6070600 ~ 6079167 (-)
LOC120555530 NA coding downstream 46985 6060618 ~ 6067226 (-)
LOC120555531 LOC106909328 coding downstream 63522 6038425 ~ 6050689 (-)
si:ch211-260e23.9 LOC104921431 coding downstream 450957 5653454 ~ 5663254 (-)
ccne1 ccne1 coding downstream 470807 5630622 ~ 5643404 (-)
LOC120555533 mnep,LOC103369663 coding upstream 19301 6145429 ~ 6153413 (-)
LOC120555536 NA coding upstream 57504 6183632 ~ 6193536 (-)
LOC120555535 NA coding upstream 108052 6234180 ~ 6241650 (-)
LOC120555542 NA coding upstream 152009 6278137 ~ 6281524 (-)
znf414 NA coding upstream 189382 6315510 ~ 6321567 (-)
G25674 NA non-coding downstream 208544 5905356 ~ 5905667 (-)
G25672 NA non-coding downstream 229050 5884844 ~ 5885161 (-)
G25667 NA non-coding downstream 236193 5876253 ~ 5878018 (-)
G25646 NA non-coding downstream 299527 5814479 ~ 5814684 (-)
G25644 NA non-coding downstream 307113 5800797 ~ 5807098 (-)
LOC120555540 LOC107712283,LOC107746645,LOC107663761,LOC107662224 non-coding upstream 83766 6209894 ~ 6211078 (-)
G25759 NA non-coding upstream 127195 6253323 ~ 6311134 (-)
G25769 NA non-coding upstream 187855 6313983 ~ 6314207 (-)
G25795 NA non-coding upstream 280260 6406388 ~ 6406597 (-)
G25828 NA non-coding upstream 404039 6530167 ~ 6531894 (-)
LOC120556425 ap2a2,LOC104921433,LOC104965011 other downstream 396778 5680042 ~ 5717433 (-)
G25228 NA other downstream 3837120 2275475 ~ 2277091 (-)
cep89 NA other downstream 4373372 1664770 ~ 1740839 (-)
LOC120556047 abcc12,LOC102304683,LOC101479372,LOC102203605 other downstream 4471863 1587544 ~ 1642348 (-)
LOC120556048 abcc12,LOC101479372,LOC101076737,LOC102203605,LOC100701509,LOC102304683 other downstream 4558565 1510165 ~ 1555646 (-)
LOC120555534 LOC103369663 other upstream 30094 6156222 ~ 6167529 (-)
ankdd1a ankdd1a other upstream 197149 6323277 ~ 6346561 (-)
pop4 pop4,LOC105418436,LOC104960843 other upstream 383131 6509259 ~ 6524355 (-)
tpcn2 tpcn2 other upstream 407914 6534042 ~ 6590639 (-)
dok4 dok4,LOC102198948,LOC100694825,LOC102775855 other upstream 516036 6642164 ~ 6693331 (-)

Expression


Co-expression Network