LOC120555533 (mnep,LOC103369663)


Basic Information

Item Value
gene id LOC120555533
gene name mnep,LOC103369663
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 6145429 ~ 6153413 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039794280.1
CATATAAGTTGGAACTCTTGTGTTTCCCCAggttctctgctgctgcttccctTAAACCATGATGCTCCAGGCGGCTGTGCTCAGTGTCCTCTTCTTCTCAGTCTACAGTTTTACTATACAGGCTTCCTTTGAAAAGCGTGAGGAGAACTCTGGCAACACCATTGAGGATGACGATTTCAGTGTGTCCACCCTGTTGGAGAAGGCCAATGTTAATCTTGGAAAGAACTTTGATGACCCTCTGGTGTTATTTGGAGACATAGCAGTACCAACAGGTCTACAGAACGCTGATCCCTGCACAGCACGAGGTTGCCTGTGGCCTAAAGCCACCGACGGCAATGTCTACGTACCCTACACCATCTCAGACGAGTACTCCACACGCGAGAGAGAAACCATCGTCGAAGGCCTGCGGTCATTTGCTGAGTCCACTTGCATCCGCTTCACCCCCTTGGCTAACGGACAAAGGGACTTTGTTGACATACAGTCTCGCCAAGGGTGTTTCTCATTTGTTGGACGTCGTGGTAGAGGCCAGGTAGTGTCTTTGATGCGCCAGGGCTGTGTTTTCCGGCAGATCATCCAACACGAGCTGCTCCACGCCCTGGGCTTCAACCATGAACAGACTCGGTCCGACAGGGacgagcatgttagcattcagCTGCAGAACGTCATTCCTGGCATGGAGCACAATTTCAGGAAGATCGAAACAAGGAACCTTGGCACTCCCTATGACTACGGCTCTGTCATGCACTACGGAAGGTTTGCCTTCTCTAGTAACAGGCAGCCAACCATCATTCCTATCCCCGACAACAATGTAGTCATTGGCAGAGCCACCCAGATGAGTCCTACTGACATCCTTCGGGTGAACCGCCTGTATGGCTGCAATTCGACTGTTTCCAGACGTGACCTGAAACCTGTGCAAAGAAAGCACTTCCTCTAGAAATGAAAGAAATCCAGAGCAAATGAGGCAAACTGATGCAACGTTGTACAAGCAAAACCAGAAATGCATCTTGTGCTTAATGAATGTGCTTTTATTCAGAATTTGATTAAATTAGCTTGCATGCTGTCCTAATAAGAAATGAAGTGTCCAGTGACATCATCATAAATGTACACTTACATGAATAACTGCTTGTGAGCTTGATTATatactaataaataaaacatgcttATTCAAATCA

Function

NR:

description
PREDICTED: high choriolytic enzyme 1-like

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0004222 metalloendopeptidase activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K08076 E3.4.24.21; astacin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039794280.1 True 1172 mRNA 0.47 10 6145429 6153413

Neighbor

gene id symbol gene type direction distance location
LOC120555532 NA coding downstream 19301 6114211 ~ 6126128 (-)
LOC120555529 NA coding downstream 66262 6070600 ~ 6079167 (-)
LOC120555530 NA coding downstream 78203 6060618 ~ 6067226 (-)
LOC120555531 LOC106909328 coding downstream 94740 6038425 ~ 6050689 (-)
si:ch211-260e23.9 LOC104921431 coding downstream 482175 5653454 ~ 5663254 (-)
LOC120555536 NA coding upstream 30219 6183632 ~ 6193536 (-)
LOC120555535 NA coding upstream 80767 6234180 ~ 6241650 (-)
LOC120555542 NA coding upstream 124724 6278137 ~ 6281524 (-)
znf414 NA coding upstream 162097 6315510 ~ 6321567 (-)
plekho2 plekho2,LOC102775773 coding upstream 193776 6347189 ~ 6379078 (-)
LOC120555539 NA non-coding downstream 19439 6123047 ~ 6125990 (-)
G25674 NA non-coding downstream 239762 5905356 ~ 5905667 (-)
G25672 NA non-coding downstream 260268 5884844 ~ 5885161 (-)
G25667 NA non-coding downstream 267411 5876253 ~ 5878018 (-)
G25646 NA non-coding downstream 330745 5814479 ~ 5814684 (-)
LOC120555540 LOC107712283,LOC107746645,LOC107663761,LOC107662224 non-coding upstream 56481 6209894 ~ 6211078 (-)
G25759 NA non-coding upstream 99910 6253323 ~ 6311134 (-)
G25769 NA non-coding upstream 160570 6313983 ~ 6314207 (-)
G25795 NA non-coding upstream 252975 6406388 ~ 6406597 (-)
G25828 NA non-coding upstream 376754 6530167 ~ 6531894 (-)
LOC120556425 ap2a2,LOC104921433,LOC104965011 other downstream 427996 5680042 ~ 5717433 (-)
G25228 NA other downstream 3868338 2275475 ~ 2277091 (-)
cep89 NA other downstream 4404590 1664770 ~ 1740839 (-)
LOC120556047 abcc12,LOC102304683,LOC101479372,LOC102203605 other downstream 4503081 1587544 ~ 1642348 (-)
LOC120556048 abcc12,LOC101479372,LOC101076737,LOC102203605,LOC100701509,LOC102304683 other downstream 4589783 1510165 ~ 1555646 (-)
LOC120555534 LOC103369663 other upstream 2809 6156222 ~ 6167529 (-)
ankdd1a ankdd1a other upstream 169864 6323277 ~ 6346561 (-)
pop4 pop4,LOC105418436,LOC104960843 other upstream 355846 6509259 ~ 6524355 (-)
tpcn2 tpcn2 other upstream 380629 6534042 ~ 6590639 (-)
dok4 dok4,LOC102198948,LOC100694825,LOC102775855 other upstream 488751 6642164 ~ 6693331 (-)

Expression


Co-expression Network