LOC120555617


Basic Information

Item Value
gene id LOC120555617
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 1459164 ~ 1507908 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039794469.1
AGCTTAACCCCGCGCTGCTCTCTGAGTTTGTCAGTTTCCTAAATATAGCGGACGAGGACCTGTGTGTTTGGGTCTGCCGAAGAcacttcaaataaaaactaactATTTACAGCAGCTTACAAAGGGaatCTCAGAGCTGGAGGAGGAATAGCTGTCTGTAATATTGTCTCCCCTTTTTTCCAAGGCACATACCAAACACGAGCAAGCCATGAAAAACTGACACTGGAGTAACAGCGCTGACAGTGGAACTATGTGTTAAGGATTGTCTGTTGAACTCTTGACTACCTGAAGCCCACTGATATTCTTCTTCGGCTGTTAGAAGAAGTTGTTTTTGCAATGGGGAGGAAGAAGATCCAGATCACCCGGATCGTAGATGAGAGGAACCGACAGGTGACTTTCATGAAGAGGAAGTTTGGTCTGATGAAGAAGGCCTATGAGTTGAGCGTTCTGTGTGACTGTGAAATCGCCCTCATCATCTTTAACAGCTCCAACAAGCTGTTCCAGTATGCTAGCACTGACATGGATAAAGTCCTGCTGAAATACACCGAGTACAATGAACCCCATGAGAGCAGAACCAACTCTGACATTGTAGAGgcCCTGAACAAGAAGGAGCACAGAGGCTGCGACAGCCCCGATGCTGACTCCTCCTACGTCCTCACCCCCACTACTGAGGAGAAATACAAGAAGATTAATGAAGAGTTTGACAACATGATGAAGGGTCATAAAATTTCCCCCGGGCTTCCACAGCAGAACTTCATGCATGGCAGCATGTCGTACAGTCCCggtgcaggaggaggaggaggaggaggaggaggaggagcaaccTCCCAAGCTCTAGCTGCAGCCACAGCCGCTCTGGCTGAAAGTGGGACCCTCTCCTCGcctcacacacacctccacagaAGCATAAACCCTTCACAAAGACCTCCCAGCACTGGaaacacagGTGGCCTGCAGGGCAGTTCTGAtatggctctgcaaaatgggcCTGGACCAGTTGTGAACGGTTTTGTGGGCTCACATGGTGGAGGCAGCTTGGGGAAGATCATACCACCCaaatctcctcctcttccacctcCTGGGAACAACATGGTCCCTACCAGCCGCAAGACAGACCTCCGAGTGGTCATCCCTCAGTCCAAAGGAATGATGCAAACActgAGTAACCAGAGGCTGAGCAGCACCCAGTCCAGCCAGCCTCTGTCCACCCCAGTGGTCTCCATCACCACACCCAGCCTGCCTCACCAGAGTCTGGGCTACTCCGGCATCAGCTCGGCTTACAACAACGATTACTCTCTGAACAGTGCAGAGCTGTCGGGCTTCGGCTCCCCTGCAGGGCCCTCTTTGGGCTCCATGGCGGCATGGCAGCAACACCAGCTGGTCTCACTGGGGTCGGGGAGCTCCAATCTCTCCATCAACACCAACCACAACGTCAACATCAAAGCCGAGCCCATCTCCCCACCCCGCGACCACCTCAGCCAATCAGGGTACATGACCCAGGCTCGTGCCCCTCCCCATCCTCACCCATCCACCAGAGCAGACATGGGGAGGTCTCCAGCAGAAAGCGTCTGCTCCTCCTGCAGCTCCCACGAGGGGGGCAGCGACcgcgaggagcagcagcagcggctgGACTTCCACATGAGTGGCTCAGAGGGCAGGCCGAGTCCCACGTTCAAACGCATGCGAATGGACAGCTGGGTGACATAGACACCTACATGACGTCACAACTCCAGGGCAATCACAGGAGGGACACTGTTATGCAAATGAAGTGTGGATTGTATtgatgtgtttctgttattttcactttcagttatctttgttttttatctttttttgtggaCAGATTTTTGTGGTCGGAAGCGTTGAGCAAAAATAGTCTTGAAAATTATGGATCTGTCAGAATGATCTCATCAACTTTCAGAAAATCTTCAGTGGTACTTAAAACACAACATGCTGTcctttttcaaatataaatcaTTTAAGCATCAGAGACAATAATAATGTGGGTCCAATTGCAGTACAATCTGTCATTTTCTTACCCAGTGGGATGCAGTACTTTACACAGAACTATCAGAAAAGCTGAGATTAGTGTTTTCTATCAGTCTTGTGGCTTCCTGATTTAGGTAGTAAAGCAGTGAAGTGCTTCTAGATGTCTCCCACTGGGGGTCACCTAATTCATTTCTGATCTTCTCAGGGTTTGAAACATTGAACAAGTCCAACATGAAAGTAATACTCCCTGCACATCATCCCTGTTAGTCCTCTTTATAAAAACACTTAATTTATATCAGCCAAAGCAGTGtgctgtttttatgttgtttgtgtttgtttttatattgtgcACAGAATAAGACaatttttcatcagatttaaAACTGAAAGCCATGGACACTTGTTCTgtatgtactatactatgaaataTGTCATTATTGTTTTGTATATACTATCTTTAATATATATCACTTTTGGTGTAACTATATATCGTTGATCTGTCTATTGTATCTGTCTGGGTGAAGTATGACACCTCCACCAGATTTGACAAAAGTATATTTTTGTGGATGATTGCCATATTTACAAGGCGTTGTCCTTTCCTTTCGTACGCCATGCTGCACTATCTGGAAACCAGGGTCTCCAATAATATACTGAAAGGGAAAAGCAAgaaaatatttgttatttaacaAAAGAAATATAGCTCTTCAGAAATTGTTTTACAAAAGGGATGTACTATAACAGACAAAGATGGCAATAGAAAATGATAAAACTTTCTGATTTTGTACGATAGCCTCAGCAGGGCTAAATTTGGCGAGACTGATAAGGTGAGGTGAGGATACATGAGCTCACATGGGACGAGAGGAAAGCTACTTATTAATCTTAGAACGAGTCTCCTGTCACAATaaccacagagaaacacacaagaACAAAGTTGTACTTATATTGTGTGTTTCCTATTAGATCATTTAAGTCACAATGAAGGAACTAAACTTAAAGATGAATTAATAAAAGTTGATCAGAAGTTCATACACTGATGAATATT
>XM_039794470.1
AAGGCGCTCTTGGGGAAGCCAGGGCTCAGAAACACTAAGGCTGAGCAGAGGAGGGACAGAGCAAGGCAGGTGGGCACTCCTGCAGGAGGAGAGAGTGGGAGAGCGGAGTCGAGTTCACTGAAGACTGCGGGGCTGAATATTTATGTTGGTGCATGTGAAGGAGTGTTGCTGTGGAGGAGAGTTTGGAGCCAGCTAGACAAGCAAGCCATGAAAAACTGACACTGGAGTAACAGCGCTGACAGTGGAACTATGTGTTAAGGATTGTCTGTTGAACTCTTGACTACCTGAAGCCCACTGATATTCTTCTTCGGCTGTTAGAAGAAGTTGTTTTTGCAATGGGGAGGAAGAAGATCCAGATCACCCGGATCGTAGATGAGAGGAACCGACAGGTGACTTTCATGAAGAGGAAGTTTGGTCTGATGAAGAAGGCCTATGAGTTGAGCGTTCTGTGTGACTGTGAAATCGCCCTCATCATCTTTAACAGCTCCAACAAGCTGTTCCAGTATGCTAGCACTGACATGGATAAAGTCCTGCTGAAATACACCGAGTACAATGAACCCCATGAGAGCAGAACCAACTCTGACATTGTAGAGgcCCTGAACAAGAAGGAGCACAGAGGCTGCGACAGCCCCGATGCTGACTCCTCCTACGTCCTCACCCCCACTACTGAGGAGAAATACAAGAAGATTAATGAAGAGTTTGACAACATGATGAAGGGTCATAAAATTTCCCCCGGGCTTCCACAGCAGAACTTCATGCATGGCAGCATGTCGTACAGTCCCggtgcaggaggaggaggaggaggaggaggaggaggagcaaccTCCCAAGCTCTAGCTGCAGCCACAGCCGCTCTGGCTGAAAGTGGGACCCTCTCCTCGcctcacacacacctccacagaAGCATAAACCCTTCACAAAGACCTCCCAGCACTGGaaacacagGTGGCCTGCAGGGCAGTTCTGAtatggctctgcaaaatgggcCTGGACCAGTTGTGAACGGTTTTGTGGGCTCACATGGTGGAGGCAGCTTGGGGAAGATCATACCACCCaaatctcctcctcttccacctcCTGGGAACAACATGGTCCCTACCAGCCGCAAGACAGACCTCCGAGTGGTCATCCCTCAGTCCAAAGGAATGATGCAAACActgAGTAACCAGAGGCTGAGCAGCACCCAGTCCAGCCAGCCTCTGTCCACCCCAGTGGTCTCCATCACCACACCCAGCCTGCCTCACCAGAGTCTGGGCTACTCCGGCATCAGCTCGGCTTACAACAACGATTACTCTCTGAACAGTGCAGAGCTGTCGGGCTTCGGCTCCCCTGCAGGGCCCTCTTTGGGCTCCATGGCGGCATGGCAGCAACACCAGCTGGTCTCACTGGGGTCGGGGAGCTCCAATCTCTCCATCAACACCAACCACAACGTCAACATCAAAGCCGAGCCCATCTCCCCACCCCGCGACCACCTCAGCCAATCAGGGTACATGACCCAGGCTCGTGCCCCTCCCCATCCTCACCCATCCACCAGAGCAGACATGGGGAGGTCTCCAGCAGAAAGCGTCTGCTCCTCCTGCAGCTCCCACGAGGGGGGCAGCGACcgcgaggagcagcagcagcggctgGACTTCCACATGAGTGGCTCAGAGGGCAGGCCGAGTCCCACGTTCAAACGCATGCGAATGGACAGCTGGGTGACATAGACACCTACATGACGTCACAACTCCAGGGCAATCACAGGAGGGACACTGTTATGCAAATGAAGTGTGGATTGTATtgatgtgtttctgttattttcactttcagttatctttgttttttatctttttttgtggaCAGATTTTTGTGGTCGGAAGCGTTGAGCAAAAATAGTCTTGAAAATTATGGATCTGTCAGAATGATCTCATCAACTTTCAGAAAATCTTCAGTGGTACTTAAAACACAACATGCTGTcctttttcaaatataaatcaTTTAAGCATCAGAGACAATAATAATGTGGGTCCAATTGCAGTACAATCTGTCATTTTCTTACCCAGTGGGATGCAGTACTTTACACAGAACTATCAGAAAAGCTGAGATTAGTGTTTTCTATCAGTCTTGTGGCTTCCTGATTTAGGTAGTAAAGCAGTGAAGTGCTTCTAGATGTCTCCCACTGGGGGTCACCTAATTCATTTCTGATCTTCTCAGGGTTTGAAACATTGAACAAGTCCAACATGAAAGTAATACTCCCTGCACATCATCCCTGTTAGTCCTCTTTATAAAAACACTTAATTTATATCAGCCAAAGCAGTGtgctgtttttatgttgtttgtgtttgtttttatattgtgcACAGAATAAGACaatttttcatcagatttaaAACTGAAAGCCATGGACACTTGTTCTgtatgtactatactatgaaataTGTCATTATTGTTTTGTATATACTATCTTTAATATATATCACTTTTGGTGTAACTATATATCGTTGATCTGTCTATTGTATCTGTCTGGGTGAAGTATGACACCTCCACCAGATTTGACAAAAGTATATTTTTGTGGATGATTGCCATATTTACAAGGCGTTGTCCTTTCCTTTCGTACGCCATGCTGCACTATCTGGAAACCAGGGTCTCCAATAATATACTGAAAGGGAAAAGCAAgaaaatatttgttatttaacaAAAGAAATATAGCTCTTCAGAAATTGTTTTACAAAAGGGATGTACTATAACAGACAAAGATGGCAATAGAAAATGATAAAACTTTCTGATTTTGTACGATAGCCTCAGCAGGGCTAAATTTGGCGAGACTGATAAGGTGAGGTGAGGATACATGAGCTCACATGGGACGAGAGGAAAGCTACTTATTAATCTTAGAACGAGTCTCCTGTCACAATaaccacagagaaacacacaagaACAAAGTTGTACTTATATTGTGTGTTTCCTATTAGATCATTTAAGTCACAATGAAGGAACTAAACTTAAAGATGAATTAATAAAAGTTGATCAGAAGTTCATACACTGATGAATATT
>XM_039794471.1
CTCTGAGTTTGTCAGTTTCCTAAATATAGCGGACGAGGACCTGTGTGTTTGGGTCTGCCGAAGAcacttcaaataaaaactaactATTTACAGCAGCTTACAAAGGGCAAGCCATGAAAAACTGACACTGGAGTAACAGCGCTGACAGTGGAACTATGTGTTAAGGATTGTCTGTTGAACTCTTGACTACCTGAAGCCCACTGATATTCTTCTTCGGCTGTTAGAAGAAGTTGTTTTTGCAATGGGGAGGAAGAAGATCCAGATCACCCGGATCGTAGATGAGAGGAACCGACAGGTGACTTTCATGAAGAGGAAGTTTGGTCTGATGAAGAAGGCCTATGAGTTGAGCGTTCTGTGTGACTGTGAAATCGCCCTCATCATCTTTAACAGCTCCAACAAGCTGTTCCAGTATGCTAGCACTGACATGGATAAAGTCCTGCTGAAATACACCGAGTACAATGAACCCCATGAGAGCAGAACCAACTCTGACATTGTAGAGgcCCTGAACAAGAAGGAGCACAGAGGCTGCGACAGCCCCGATGCTGACTCCTCCTACGTCCTCACCCCCACTACTGAGGAGAAATACAAGAAGATTAATGAAGAGTTTGACAACATGATGAAGGGTCATAAAATTTCCCCCGGGCTTCCACAGCAGAACTTCATGCATGGCAGCATGTCGTACAGTCCCggtgcaggaggaggaggaggaggaggaggaggaggagcaaccTCCCAAGCTCTAGCTGCAGCCACAGCCGCTCTGGCTGAAAGTGGGACCCTCTCCTCGcctcacacacacctccacagaAGCATAAACCCTTCACAAAGACCTCCCAGCACTGGaaacacagGTGGCCTGCAGGGCAGTTCTGAtatggctctgcaaaatgggcCTGGACCAGTTGTGAACGGTTTTGTGGGCTCACATGGTGGAGGCAGCTTGGGGAAGATCATACCACCCaaatctcctcctcttccacctcCTGGGAACAACATGGTCCCTACCAGCCGCAAGACAGACCTCCGAGTGGTCATCCCTCAGTCCAAAGGAATGATGCAAACActgAGTAACCAGAGGCTGAGCAGCACCCAGTCCAGCCAGCCTCTGTCCACCCCAGTGGTCTCCATCACCACACCCAGCCTGCCTCACCAGAGTCTGGGCTACTCCGGCATCAGCTCGGCTTACAACAACGATTACTCTCTGAACAGTGCAGAGCTGTCGGGCTTCGGCTCCCCTGCAGGGCCCTCTTTGGGCTCCATGGCGGCATGGCAGCAACACCAGCTGGTCTCACTGGGGTCGGGGAGCTCCAATCTCTCCATCAACACCAACCACAACGTCAACATCAAAGCCGAGCCCATCTCCCCACCCCGCGACCACCTCAGCCAATCAGGGTACATGACCCAGGCTCGTGCCCCTCCCCATCCTCACCCATCCACCAGAGCAGACATGGGGAGGTCTCCAGCAGAAAGCGTCTGCTCCTCCTGCAGCTCCCACGAGGGGGGCAGCGACcgcgaggagcagcagcagcggctgGACTTCCACATGAGTGGCTCAGAGGGCAGGCCGAGTCCCACGTTCAAACGCATGCGAATGGACAGCTGGGTGACATAGACACCTACATGACGTCACAACTCCAGGGCAATCACAGGAGGGACACTGTTATGCAAATGAAGTGTGGATTGTATtgatgtgtttctgttattttcactttcagttatctttgttttttatctttttttgtggaCAGATTTTTGTGGTCGGAAGCGTTGAGCAAAAATAGTCTTGAAAATTATGGATCTGTCAGAATGATCTCATCAACTTTCAGAAAATCTTCAGTGGTACTTAAAACACAACATGCTGTcctttttcaaatataaatcaTTTAAGCATCAGAGACAATAATAATGTGGGTCCAATTGCAGTACAATCTGTCATTTTCTTACCCAGTGGGATGCAGTACTTTACACAGAACTATCAGAAAAGCTGAGATTAGTGTTTTCTATCAGTCTTGTGGCTTCCTGATTTAGGTAGTAAAGCAGTGAAGTGCTTCTAGATGTCTCCCACTGGGGGTCACCTAATTCATTTCTGATCTTCTCAGGGTTTGAAACATTGAACAAGTCCAACATGAAAGTAATACTCCCTGCACATCATCCCTGTTAGTCCTCTTTATAAAAACACTTAATTTATATCAGCCAAAGCAGTGtgctgtttttatgttgtttgtgtttgtttttatattgtgcACAGAATAAGACaatttttcatcagatttaaAACTGAAAGCCATGGACACTTGTTCTgtatgtactatactatgaaataTGTCATTATTGTTTTGTATATACTATCTTTAATATATATCACTTTTGGTGTAACTATATATCGTTGATCTGTCTATTGTATCTGTCTGGGTGAAGTATGACACCTCCACCAGATTTGACAAAAGTATATTTTTGTGGATGATTGCCATATTTACAAGGCGTTGTCCTTTCCTTTCGTACGCCATGCTGCACTATCTGGAAACCAGGGTCTCCAATAATATACTGAAAGGGAAAAGCAAgaaaatatttgttatttaacaAAAGAAATATAGCTCTTCAGAAATTGTTTTACAAAAGGGATGTACTATAACAGACAAAGATGGCAATAGAAAATGATAAAACTTTCTGATTTTGTACGATAGCCTCAGCAGGGCTAAATTTGGCGAGACTGATAAGGTGAGGTGAGGATACATGAGCTCACATGGGACGAGAGGAAAGCTACTTATTAATCTTAGAACGAGTCTCCTGTCACAATaaccacagagaaacacacaagaACAAAGTTGTACTTATATTGTGTGTTTCCTATTAGATCATTTAAGTCACAATGAAGGAACTAAACTTAAAGATGAATTAATAAAAGTTGATCAGAAGTTCATACACTGATGAATATT

Function

GO: NA

KEGG:

id description
K09260 MEF2A; MADS-box transcription enhancer factor 2A

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039794469.1 True 3031 mRNA 0.46 11 1459164 1507908
XM_039794470.1 False 3030 mRNA 0.46 10 1459164 1489349
XM_039794471.1 False 2936 mRNA 0.46 10 1459164 1507889

Neighbor

gene id symbol gene type direction distance location
tdp1 tdp1 coding downstream 256082 1193040 ~ 1203082 (-)
LOC120556384 LOC104919714 coding downstream 268278 1176462 ~ 1190886 (-)
pdpr pdpr coding downstream 402870 1037755 ~ 1056294 (-)
mrpl46 mrpl46 coding downstream 429109 1021963 ~ 1030055 (-)
sv2ba LOC103359500,LOC101162590,LOC101062552 coding downstream 1132436 301918 ~ 326728 (-)
rhpn2 rhpn2 coding upstream 236284 1744192 ~ 1774421 (-)
lrp3 lrp3 coding upstream 310523 1818431 ~ 1831946 (-)
trnat-agu_3 NA coding upstream 325413 1833321 ~ 1833394 (-)
dnaja2a dnaja2 coding upstream 327180 1835088 ~ 1846922 (-)
LOC120556324 neto2 coding upstream 340946 1848854 ~ 1871276 (-)
G25039 NA non-coding downstream 622 1458037 ~ 1458542 (-)
G24988 NA non-coding downstream 180347 1278569 ~ 1278817 (-)
G24987 LOC102205592,LOC101476278,LOC102787001,LOC102297232,LOC100534518,LOC101075605 non-coding downstream 192204 1266686 ~ 1266960 (-)
G24978 NA non-coding downstream 204540 1252718 ~ 1254624 (-)
G24974 NA non-coding downstream 216461 1240767 ~ 1242703 (-)
G25110 NA non-coding upstream 152586 1660494 ~ 1660735 (-)
G25111 NA non-coding upstream 152924 1660832 ~ 1661353 (-)
G25112 NA non-coding upstream 153451 1661359 ~ 1661697 (-)
G25113 NA non-coding upstream 153820 1661728 ~ 1662486 (-)
G25246 NA non-coding upstream 940519 2448427 ~ 2449619 (-)
LOC120555898 mctp2 other downstream 2056 1410674 ~ 1457108 (-)
pnoca NA other downstream 353997 1061104 ~ 1105167 (-)
ntrk3b NA other downstream 537615 706157 ~ 921549 (-)
LOC120556048 abcc12,LOC101479372,LOC101076737,LOC102203605,LOC100701509,LOC102304683 other upstream 2257 1510165 ~ 1555646 (-)
LOC120556047 abcc12,LOC102304683,LOC101479372,LOC102203605 other upstream 79636 1587544 ~ 1642348 (-)
cep89 NA other upstream 156862 1664770 ~ 1740839 (-)
G25228 NA other upstream 767567 2275475 ~ 2277091 (-)
LOC120556425 ap2a2,LOC104921433,LOC104965011 other upstream 4172134 5680042 ~ 5717433 (-)

Expression


Co-expression Network