rrad (rrad)


Basic Information

Item Value
gene id rrad
gene name rrad
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 22374134 ~ 22377140 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039794480.1
GCGAATCCTTGCCGACGTCACTCCCAGTCATATATAAATATTCTCAGCAGCGACTCTGATCAGACTCAAACGAAACCGCTTTTTGGCTACAAGAACTCTTCAAACCAAGGATTATTGGATTGCCTTCTTTGGATTTACTTGCCAGCACCGAATCATCGCCAAAAGCACAATGACTTTGAACAAGGATGACAAATTGCGGAACATGGACAAGAGAAGAGGAAGTATGCCGTTCCCCATGAATTTACCAAACCTACACCGGAGAAGCATGCCCGTGGACGATCGGGACCTGCGCGCAACGATGCCACAGACGGGGCAGACCGACGAGCTGTCCAACCTCCTGCGCTGCACGTCCTACTCCCCGAAGGAGCAGCACCGAGGCAGCTGCGCGTCGGACTCCTCCGACTCGGTGATCTCCACCGGCAGCGAATCGGAGTCCCAGCTGTACAAGGTGGTTCTCCTCGGGGAGCACGGCGTTGGCAAGTCCAGCCTGGCTCGCGTCTTTGGAGGAGTTGATGATGCTGGTCACGATTGCGACCATCGCGATGAAGCAGGAAACACTTATGACAGATCTATCGTGGTGGATGAAGAGGAGTCATCCATTGTGTTGTATGACATCTGGGAACAGGATAACAGCCAGTGGCTAAAAGAACAGTGCATGCGGATGGGAGACGCCTACATCATTGTGTATTCAGTGACAGACAAATCAAGCTTCGAGAAGGCGTCAGAGCTGCGTATTCAGCTGCGCCGAGCCAGGCAGTCAGAGAACATTCCTATAATCCTTGTGGGCAACAAGAGTGACCTGGTGCGGTCCAGAGAGGTGTCTGCAGATGAGGGGAGCGCCTGTGCAGTGGTATTCGACTGCAAGTTCATCGAGACGTCTGCATCCCTTCACCACAATGTGCACGACCTTTTTGAGGGCATCGTCCGACAGATCCGCTTGAGGAAAGACAGCAAGGAGGAGAACGCAAGACGCATGGCCAACTGCAGGCGTAGAGAGAGCATTGGCAAGAAGGCCAAGCGGTTTCTGGGCCGCATGGTTGCACGCAAGAACAAGAAGATGGCTTTTAGGCAGAAGTCAAAGTCCTGCCATGACCTCACAGTTCTCTGAGGAacagacagacatttttttcctttggCCTCTGAAGACCAGacgctgtgtgtgttttaacactAACCCTAAAGGACTAATAGAGCTGtacagaaatatattttttattttttagacgCCAACCAAAAGCAGAGAGGACTTAATTTAAATAGAAATGACACTATTCAAGTCATATCATGATAATGGTGATAACTTGCATGAAGCTttgcaaacatttattttattttattatttttgtctgCCTTAAATATGTCGCTGTCATAATATGATCAGTTTGTAAGAGAAATCCACAGAGGCTTGTTTTTCTAATGAGTTGCAAAGATTGCCTTGCTGTTGGGTCATTGTTGTGCTCCTTTATTGGAGGGGATTGCTGTATATACTATAACATGAATGACGCTGAATGCAACATACATCTCATtatcatgaaaaaaacatggTAAAGGATCACAATACTTGGTCACCTGGAGTCATATTTACTTGAAACGTGGTACGCAGGTTCGTGCTTCGGCCAAGTTGTTGTTGTTCCCGTAACATTGAATTCAGGTTGTGAATGTATGAGTAAAGCAATAAGTTATGTTAGT

Function

symbol description
rrad Enables calcium channel regulator activity. Predicted to act upstream of or within negative regulation of high voltage-gated calcium channel activity and signal transduction. Predicted to be located in membrane. Predicted to be active in plasma membrane. Is expressed in cardiovascular system; endocrine system; nervous system; and otic vesicle. Human ortholog(s) of this gene implicated in type 2 diabetes mellitus. Orthologous to human RRAD (RRAD, Ras related glycolysis inhibitor and calcium channel regulator).

NR:

description
GTP-binding protein RAD-like

GO:

id name namespace
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0006184 obsolete GTP catabolic process biological_process
GO:0016020 membrane cellular_component
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function

KEGG:

id description
K07845 RRAD, RAD1; Ras-related associated with diabetes

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039794480.1 True 1689 mRNA 0.47 5 22374134 22377140

Neighbor

gene id symbol gene type direction distance location
lmo7b NA coding upstream 147028 22189896 ~ 22227106 (+)
LOC120555860 NA coding upstream 452258 21911406 ~ 21921876 (+)
LOC120555410 LOC102205483,LOC101478550,LOC103365221,LOC100711032,LOC102299296,LOC102798867 coding upstream 664753 21699803 ~ 21709381 (+)
LOC120556067 NA coding upstream 692369 21674424 ~ 21681765 (+)
mrpl16 mrpl16,LOC102799737 coding upstream 699835 21668518 ~ 21674299 (+)
nae1 nae1 coding downstream 56371 22433511 ~ 22440373 (+)
dync1li2 dync1li2 coding downstream 94369 22471509 ~ 22488379 (+)
cmtm4 cmtm4 coding downstream 112372 22489512 ~ 22507555 (+)
trappc2l trappc2l coding downstream 162140 22539280 ~ 22542996 (+)
trnag-ucc_7 NA coding downstream 170061 22547201 ~ 22547272 (+)
G29085 NA non-coding upstream 5631 22368129 ~ 22368503 (+)
LOC120556188 NA non-coding upstream 213239 22159570 ~ 22160895 (+)
G29005 NA non-coding upstream 244556 22128964 ~ 22129578 (+)
G29004 NA non-coding upstream 289733 22083945 ~ 22084401 (+)
G28990 NA non-coding upstream 484585 21886589 ~ 21889549 (+)
G29101 NA non-coding downstream 30826 22407966 ~ 22408239 (+)
G29135 galns non-coding downstream 156802 22533942 ~ 22534868 (+)
G29139 NA non-coding downstream 171560 22548700 ~ 22601559 (+)
G29176 NA non-coding downstream 375328 22752468 ~ 22753645 (+)
G29241 ist1 non-coding downstream 620562 22997702 ~ 23001049 (+)
gpc5a gpc5,LOC103365231 other upstream 502109 21720034 ~ 21872025 (+)
dcun1d2b dcun1d2,LOC102792160 other upstream 770228 21596331 ~ 21603906 (+)
tpp2 tpp2 other upstream 811320 21525592 ~ 21562814 (+)
grk1a grk1 other upstream 940987 21421110 ~ 21433147 (+)
G28826 NA other upstream 970684 21396213 ~ 21403450 (+)
ankrd11 ankrd11 other downstream 387579 22764719 ~ 22895007 (+)
LOC120555548 LOC103365626,LOC104942698 other downstream 604643 22981783 ~ 22994164 (+)
G29292 NA other downstream 759592 23136732 ~ 23137027 (+)
igdcc3 igdcc3 other downstream 1066009 23443149 ~ 23517263 (+)
G29433 NA other downstream 1349872 23727012 ~ 23732471 (+)

Expression


Co-expression Network