si:ch211-260e23.9 (LOC104921431)


Basic Information

Item Value
gene id si:ch211-260e23.9
gene name LOC104921431
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 5653454 ~ 5663254 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039794567.1
AAAACATTATGGAGTTAGCTAGCTTGTTGTTTGGTTGTTTGTCGCAAGCTAGCTAACTCCATAATGTAATAGTCCATTCGCTCACGCACAAACCGAAGGAAAAGTGGATTTGGTTTGTGCATGTACGCAGTGACTGACGCACACCCGCTCTGCCCACGGTCCCGCCTCATTGGGCGGGGCTTGGTGACGTTTCAGGACACAGGGAGGACTCTCGCCGATAAACAACTTTGAGATCAAAACAATCTCTGAAGAACAGCAAGAGAGCGGGGATACTTTCTGTACAACGACCACACCCGAAGACAAACATACTTTATTTGGTCGGATTGCAATAGAGGCATAAAGATGATCGGAAAGATTCTTTCTCGTCTGCTTGGGAACGCCGGGGACGACTTTGAGGCAGCAGAGGACACTTACGAGGATCTGATGGAGTTTGAGGAGGGAGGATGGGTGATTGTTAATCTCCCAGAGAGCGGGCTGCTGTCAGCCCCTGAGGTGGACCCCCTGGAGAACCTGCTGATAGAGCACCCCAGCATGTCTGTCTACCAGATGAGCTGCAGGATgagtggagaggaggaggaggagctgggctctgatgaagatgaagaggacACCTCCAGGCCTGTGGCAGTAAGGCCGCACATATCGTGGCGTCTGGCTGCCTGGGGAATCCCTCTGCCCTGCAACATCCAGCTGCTGGCGGTCCAGAGGGCCAGGGCCCAGGCTGAGCAGAGGAAGCTGAGCCGCAGCGCCCTCCACAGGCACAACCTGGCTAAGGTGCGATTCTCCCCGGCAGAGAAACGCTACGGCCACTTCAAGCAGCCCTGCCAGCGCCTCTACAACTACTGAACGGGAGTGATGGGACTGCGTGTGAGAGGGTGTGTTTCCAGTTGCCTCTACCATAGCTAAGTTGTGCAGCGCAGTGCCTTGACTCTGAATTTACTCaggtttttttttgcaattgttTCACCTCGCACAGTTAACGCTGTATATCCCAAGGCAAAGCATGTGAGATTCGCCTATTCCGGTGCAGTAAAATGATCAAACATCGGACAAATgaaccgcacacacacaagtgttTATTTTGATTTGAATACAGGCAACCTGTACTGCACCCCTTGCATCTGAAACCCCCGAGAACACTGAATCTCGATCTCCTGATCTCCCTCCTCATGATTGACACGGTCGGTCCCTCAGGTTGGAAAGCATTAGTAATGCACCGTTACTTTCAAATAAAAGCCTTTTGTACATTATGAACAGTTGAGTGGTTTGAGTGATTAGATATTAGTAGGAATAGGGGTTATAGGAAGTTGGAGGTGTGTGAAAGTTATTCTAAAAGTGTTTTTACTGTGCGACACTGATCCAAAAAAATTGCTTGAAATGAGTGAACTATGATGCAGTTGGATCACGGTGTTATGGCATGTTTTTTTGACTGATTATGCGTGATTTTATTCAGTATGTTTTATATCCCGTGCCTTAGCTTTAGACGTTTTTGTGACGAGTGTAATAAAAGCTCATTTTCATATCACAGTGACCTGTACAGCATTCAtgtcaaaaaataattacacatacactgttaatgttttgtatgGGGTCACCCATTTTGTACTTTTCAACAGGTTCTCACTTTTTCATGTAAGACACAGATTGTTCATTTTGGACGAGTGTAAATACAGTTCAATATTATGTTTTTCTATTTGCGTGTATttataaaatgtacaaaaaaataaataaagtcttgTTTTCTTAA
>XM_039794568.1
GAGTTAGCTAGCTTGTTGTTTGGTTGTTTGTCGCAAGCTAGCTAACTCCATAATGTAATAGTCCATTCGCTCACGCACAAACCGTGACTGACGCACACCCGCTCTGCCCACGGTCCCGCCTCATTGGGCGGGGCTTGGTGACGTTTCAGGACACAGGGAGGACTCTCGCCGATAAACAACTTTGAGATCAAAACAATCTCTGAAGAACAGCAAGAGAGCGGGGATACTTTCTGTACAACGACCACACCCGAAGACAAACATACTTTATTTGGTCGGATTGCAATAGAGGCATAAAGATGATCGGAAAGATTCTTTCTCGTCTGCTTGGGAACGCCGGGGACGACTTTGAGGCAGCAGAGGACACTTACGAGGATCTGATGGAGTTTGAGGAGGGAGGATGGGTGATTGTTAATCTCCCAGAGAGCGGGCTGCTGTCAGCCCCTGAGGTGGACCCCCTGGAGAACCTGCTGATAGAGCACCCCAGCATGTCTGTCTACCAGATGAGCTGCAGGATgagtggagaggaggaggaggagctgggctctgatgaagatgaagaggacACCTCCAGGCCTGTGGCAGTAAGGCCGCACATATCGTGGCGTCTGGCTGCCTGGGGAATCCCTCTGCCCTGCAACATCCAGCTGCTGGCGGTCCAGAGGGCCAGGGCCCAGGCTGAGCAGAGGAAGCTGAGCCGCAGCGCCCTCCACAGGCACAACCTGGCTAAGGTGCGATTCTCCCCGGCAGAGAAACGCTACGGCCACTTCAAGCAGCCCTGCCAGCGCCTCTACAACTACTGAACGGGAGTGATGGGACTGCGTGTGAGAGGGTGTGTTTCCAGTTGCCTCTACCATAGCTAAGTTGTGCAGCGCAGTGCCTTGACTCTGAATTTACTCaggtttttttttgcaattgttTCACCTCGCACAGTTAACGCTGTATATCCCAAGGCAAAGCATGTGAGATTCGCCTATTCCGGTGCAGTAAAATGATCAAACATCGGACAAATgaaccgcacacacacaagtgttTATTTTGATTTGAATACAGGCAACCTGTACTGCACCCCTTGCATCTGAAACCCCCGAGAACACTGAATCTCGATCTCCTGATCTCCCTCCTCATGATTGACACGGTCGGTCCCTCAGGTTGGAAAGCATTAGTAATGCACCGTTACTTTCAAATAAAAGCCTTTTGTACATTATGAACAGTTGAGTGGTTTGAGTGATTAGATATTAGTAGGAATAGGGGTTATAGGAAGTTGGAGGTGTGTGAAAGTTATTCTAAAAGTGTTTTTACTGTGCGACACTGATCCAAAAAAATTGCTTGAAATGAGTGAACTATGATGCAGTTGGATCACGGTGTTATGGCATGTTTTTTTGACTGATTATGCGTGATTTTATTCAGTATGTTTTATATCCCGTGCCTTAGCTTTAGACGTTTTTGTGACGAGTGTAATAAAAGCTCATTTTCATATCACAGTGACCTGTACAGCATTCAtgtcaaaaaataattacacatacactgttaatgttttgtatgGGGTCACCCATTTTGTACTTTTCAACAGGTTCTCACTTTTTCATGTAAGACACAGATTGTTCATTTTGGACGAGTGTAAATACAGTTCAATATTATGTTTTTCTATTTGCGTGTATttataaaatgtacaaaaaaataaataaagtcttgTTTTCTTAA
>XM_039794569.1
TATCTGGAACTAGTCTCAGATAAAACTCTTTGAAAACATTATGGAGTTAGCTAGCTTGTTGTTTGGTTGTTTGTCGCAAGCTAGCTAACTCCATAATGTAATAGTCCATTCGCTCACGCACAAACCGGACACAGGGAGGACTCTCGCCGATAAACAACTTTGAGATCAAAACAATCTCTGAAGAACAGCAAGAGAGCGGGGATACTTTCTGTACAACGACCACACCCGAAGACAAACATACTTTATTTGGTCGGATTGCAATAGAGGCATAAAGATGATCGGAAAGATTCTTTCTCGTCTGCTTGGGAACGCCGGGGACGACTTTGAGGCAGCAGAGGACACTTACGAGGATCTGATGGAGTTTGAGGAGGGAGGATGGGTGATTGTTAATCTCCCAGAGAGCGGGCTGCTGTCAGCCCCTGAGGTGGACCCCCTGGAGAACCTGCTGATAGAGCACCCCAGCATGTCTGTCTACCAGATGAGCTGCAGGATgagtggagaggaggaggaggagctgggctctgatgaagatgaagaggacACCTCCAGGCCTGTGGCAGTAAGGCCGCACATATCGTGGCGTCTGGCTGCCTGGGGAATCCCTCTGCCCTGCAACATCCAGCTGCTGGCGGTCCAGAGGGCCAGGGCCCAGGCTGAGCAGAGGAAGCTGAGCCGCAGCGCCCTCCACAGGCACAACCTGGCTAAGGTGCGATTCTCCCCGGCAGAGAAACGCTACGGCCACTTCAAGCAGCCCTGCCAGCGCCTCTACAACTACTGAACGGGAGTGATGGGACTGCGTGTGAGAGGGTGTGTTTCCAGTTGCCTCTACCATAGCTAAGTTGTGCAGCGCAGTGCCTTGACTCTGAATTTACTCaggtttttttttgcaattgttTCACCTCGCACAGTTAACGCTGTATATCCCAAGGCAAAGCATGTGAGATTCGCCTATTCCGGTGCAGTAAAATGATCAAACATCGGACAAATgaaccgcacacacacaagtgttTATTTTGATTTGAATACAGGCAACCTGTACTGCACCCCTTGCATCTGAAACCCCCGAGAACACTGAATCTCGATCTCCTGATCTCCCTCCTCATGATTGACACGGTCGGTCCCTCAGGTTGGAAAGCATTAGTAATGCACCGTTACTTTCAAATAAAAGCCTTTTGTACATTATGAACAGTTGAGTGGTTTGAGTGATTAGATATTAGTAGGAATAGGGGTTATAGGAAGTTGGAGGTGTGTGAAAGTTATTCTAAAAGTGTTTTTACTGTGCGACACTGATCCAAAAAAATTGCTTGAAATGAGTGAACTATGATGCAGTTGGATCACGGTGTTATGGCATGTTTTTTTGACTGATTATGCGTGATTTTATTCAGTATGTTTTATATCCCGTGCCTTAGCTTTAGACGTTTTTGTGACGAGTGTAATAAAAGCTCATTTTCATATCACAGTGACCTGTACAGCATTCAtgtcaaaaaataattacacatacactgttaatgttttgtatgGGGTCACCCATTTTGTACTTTTCAACAGGTTCTCACTTTTTCATGTAAGACACAGATTGTTCATTTTGGACGAGTGTAAATACAGTTCAATATTATGTTTTTCTATTTGCGTGTATttataaaatgtacaaaaaaataaataaagtcttgTTTTCTTAA

Function

NR:

description
tumor protein p53 inducible nuclear protein 2-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039794567.1 True 1747 mRNA 0.46 5 5653454 5663222
XM_039794568.1 False 1701 mRNA 0.47 5 5653454 5663211
XM_039794569.1 False 1679 mRNA 0.45 5 5653454 5663254

Neighbor

gene id symbol gene type direction distance location
ccne1 ccne1 coding downstream 10050 5630622 ~ 5643404 (-)
znf536 znf536,LOC102211462 coding downstream 309246 5058534 ~ 5344208 (-)
znf507 NA coding downstream 1278156 4351498 ~ 4375298 (-)
dpy19l3 dpy19l3 coding downstream 1319934 4265244 ~ 4333520 (-)
dhcr7 dhcr7 coding downstream 2052021 3590280 ~ 3601433 (-)
LOC120555531 LOC106909328 coding upstream 375171 6038425 ~ 6050689 (-)
LOC120555530 NA coding upstream 397364 6060618 ~ 6067226 (-)
LOC120555529 NA coding upstream 407346 6070600 ~ 6079167 (-)
LOC120555532 NA coding upstream 450957 6114211 ~ 6126128 (-)
LOC120555533 mnep,LOC103369663 coding upstream 482175 6145429 ~ 6153413 (-)
G25592 NA non-coding downstream 27795 5625456 ~ 5625659 (-)
LOC120556161 NA non-coding downstream 29575 5574792 ~ 5623879 (-)
LOC120556144 NA non-coding downstream 728446 4923506 ~ 4925008 (-)
G25566 NA non-coding downstream 816182 4836633 ~ 4837272 (-)
G25544 NA non-coding downstream 945753 4707411 ~ 4707701 (-)
G25612 NA non-coding upstream 11106 5674360 ~ 5676297 (-)
G25637 NA non-coding upstream 92256 5755510 ~ 5756425 (-)
G25644 NA non-coding upstream 137543 5800797 ~ 5807098 (-)
G25646 NA non-coding upstream 151225 5814479 ~ 5814684 (-)
G25667 NA non-coding upstream 212999 5876253 ~ 5878018 (-)
G25228 NA other downstream 3376363 2275475 ~ 2277091 (-)
cep89 NA other downstream 3912615 1664770 ~ 1740839 (-)
LOC120556047 abcc12,LOC102304683,LOC101479372,LOC102203605 other downstream 4011106 1587544 ~ 1642348 (-)
LOC120556048 abcc12,LOC101479372,LOC101076737,LOC102203605,LOC100701509,LOC102304683 other downstream 4097808 1510165 ~ 1555646 (-)
LOC120555898 mctp2 other downstream 4196346 1410674 ~ 1457108 (-)
LOC120556425 ap2a2,LOC104921433,LOC104965011 other upstream 16788 5680042 ~ 5717433 (-)
LOC120555534 LOC103369663 other upstream 492968 6156222 ~ 6167529 (-)
ankdd1a ankdd1a other upstream 660023 6323277 ~ 6346561 (-)
pop4 pop4,LOC105418436,LOC104960843 other upstream 846005 6509259 ~ 6524355 (-)
tpcn2 tpcn2 other upstream 870788 6534042 ~ 6590639 (-)

Expression


Co-expression Network