XLOC_005073


Basic Information

Item Value
gene id XLOC_005073
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 2703355 ~ 2744641 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00011066
TTGAAATCGGCCTTTATTAATACTGTGAAAAAAGTCAACTTTATGAGCCTTTCAATAGATGCATCAGTATCGCTGTTAATACACGAACTACATCATAacacaaaataattgtgatttataACTCTGGTATCAACGTTTTGGTGTGGAATAGTACAGGTCACAATGTTTCAAATGGTCGGCACAAGcgaataaaacaaactaaatagcaTCATACTGTAAGATAGCTTGCGTTACATCTCATCTGAATAAACCGTGGAGTTTTTGCTTGTTCACAGCTGAGCACTTGTTCTCTTTGAGGAAACCAAATCATGCATCTTTTAGGAAATACAGTGCTACTGTATCATGATGTATaaaaggaaggacagtttaaacgtaacaaaaacaaacacactgaagGCACTGGCTGTTATCTGAGGCTAaatgattatcttttttttttcattttaatgtttttggttTCATGCACAGTGTCCTGGTTTGACACCTTGTCGTATTCAAGTACCTTCCTTCAGGCGTGGGGATAATAAATTAAATGCTGTGAACTGCCCTGCAGTTGCAATATGTTTATGTTTGATGAGGAAATGCTAAGGAAACACGATGAATATCAACATACGTACAGTATAGTTGCGGAATACAGAGAACTGACCGGACTTTGCATTTAGAGGTTCAACCTTTACAATAAACAAACTTGATCCCAATAAACCTGCCAAGTACATTCCTGAATCATAAGacagaaaacattaaaaataacctaaaggggacctatttttcccatttttcaagatttaatataagtctctCATGTCTCCAGaacgtgtctgtaaagtttcagctcaaaacacccattagattatttattagcGCTTTTCAGAAtgttggattttctgctctgaacaaccAAGTCGCTGTTTTCGTGGCCTGTACCTTTAATGTTGGTTCTCTCTGCCCAcagttcccacatgcctgtcagagtgtgtctcAATCTCCAccctcggctgcatcagataaccgacagacatgaaggaagcagacctCACATAACGTTtgagagaaatactacaGAGGCTGATGAATGTTCCTCAAAACCTCTTCTCTGGAGCGGCGTGGGAGGACGATGTTTTTATAACACAGTCAACAAAA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00011066 True 1140 lncRNA 0.38 2 2703355 2744641

Neighbor

gene id symbol gene type direction distance location
XLOC_005072 NA coding downstream 33855 2625669 ~ 2669500 (-)
XLOC_005071 CU929359.1 coding downstream 85845 2579237 ~ 2617510 (-)
XLOC_005070 mapk8b coding downstream 180868 2505519 ~ 2522487 (-)
XLOC_005069 NA coding downstream 223424 2067963 ~ 2479931 (-)
XLOC_005068 NA coding downstream 701531 2000636 ~ 2001824 (-)
XLOC_005074 ubtd1b coding upstream 35549 2780190 ~ 2800859 (-)
XLOC_005075 zdhhc16b coding upstream 104943 2849584 ~ 2869584 (-)
XLOC_005076 fam20a coding upstream 161969 2906610 ~ 2940070 (-)
XLOC_005077 si:dkey-202c14.3 coding upstream 206545 2951186 ~ 2993095 (-)
XLOC_005078 dcxr coding upstream 298667 3043308 ~ 3053882 (-)
XLOC_005067 NA non-coding downstream 701865 2000019 ~ 2001490 (-)
XLOC_005083 NA non-coding upstream 537115 3281756 ~ 3284909 (-)
XLOC_005086 NA non-coding upstream 774527 3519168 ~ 3544016 (-)
XLOC_005087 NA non-coding upstream 825106 3569747 ~ 3570081 (-)
XLOC_005092 NA non-coding upstream 1037980 3782621 ~ 3786382 (-)
XLOC_005094 NA non-coding upstream 1115823 3860464 ~ 3865234 (-)

Expression


Co-expression Network