pde8a (pde8a,LOC100690151,LOC102210709,LOC101463592,LOC102780154)


Basic Information

Item Value
gene id pde8a
gene name pde8a,LOC100690151,LOC102210709,LOC101463592,LOC102780154
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 18505528 ~ 18557335 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039794633.1
AGGCTGTAGGTCAATCCTTGCGGGTGCTTTTATTGGATGTGCCGCTGTCAAGCAGTGCTGAAGAATTGGAAGGGCAAACGCCAGAAAAGGCAGAGaaaagacaaacataaaatcagCATTATGTAGCTCGGTCCTGCCTTACCTCCGCTCTCGTTCACCGTGAATATTCCTGCCGTCCCCGATCTCAGATCCGAAACTTGTGGACACGGAGCGgtcttgtggttttttttttttgttgttgttgtgtgtgtttttttttttttttttttttttttttttttttttagatttttctctctgtgtctctcaaGCGATTGCATTCTCCAAAGCTGGTACCTCCACATATTGCAATCTTACAGCCTCTacatccttttttttccccctccagaATGAAAGAAAATCGTGGAGCCTGGTGACACTGTGGCACACTGCACCCGGGTTTGGTCCTCTTATACCAGGCGGATCATCCTCAACCGGGCAGCGGATGCCTTAATGGAGATTTGCAAGCCATCCACCAAGATTTCTCCGCTTCCTAAATTGCTGAATGTGGGCTGATAAATGGAGTGTTCTGTCGGACTACATAGGCTAATGACATTATGTTTGACGGAGGGTGTTTGACATCGGAGCGACTGGCCAGAATAACACCCTGCAGTGTGAATATTTCAGCCTGTTGATGATGAACCGCTCAGGACTGGAGCAAAGTGTCGTGAGAACCGGTTTATGGCCCGTGTCTTGAGCTGAAGTGTGCAACCAGATTGTTtaagtgagaaagagagagagagagagagagagagagagagagagagagagagagagagaaaaaaataagcatCATTTTTTGATGGCTCCGGGGTGGGGGAGGACGACTACACATGAAACCTTGGACACAAAAATGGATAAAACTATTGCATGAAGCTGGCGGGGTGGGGGGGACTGCAtggtttgttggtttgtttgtttgttaggcCTACTTGATAACAGTGAAGTTGAGGAAAAATGAGAAAATGGTGATGTGGTACGAAGAAGGCGAGAATTGGAGCCGGAGtgagggataaaaaaaaaaaaaacgtccatGGGGATCTGAGCAGCCCAGCTGAAGAATAACGGGATCCAAGTTTTCGAGGATAAGACAGCTGCTTTGATTAAAGACCTCCAATTAACTTCatgtgaaaaagagagggaggaaatcAGCTTCCTGGTCGGGGGGTGGGTGATAGAGAGATATATTATTCATGCCTTGTGTTAGAGCAATTGGAGAACCGGCTTTGCTGTGGCCTAGATGATACATATagcatgtatatatgtatttctatatagcctatttaaaaaaaaaaaaaaaaaaaaaaaaaaaccttaggAGGAAGAGTGgaccttgaaaaaaaacaaacaaagagaggGCGAATGACACTCGGGTAGCCTCAAAGTAAAGCACttgcacaaaaagaaaaaggctgAAGTGGGTTGAAGCATGGGCTGTGCTTCAAGTATTCATATCTCTGATAGGGTGGTCTACCACGGTGGAAAAGAGTCCGAGGATTCCCACTCACCCCAGCAGACTAATACCACTCAGCTTCAAGGAAATCCTGCCTCGGGACTACCCCTAAAACCCCTGAGCTGCAAGACCACATTAACAGAGGTGCAATTTGGACCAATGAAGTTATTTAAAGACCCACTTCAGGTACTTTTAGTTTTTGCCAAAGAGGACAGTCAGAGTAATGGCTTCTGCTGGGCATGTGAGAAGGGCAACTTCAGGTGCAGCATGGCACGAACACCCGAGTCTGCTCTTGAATGCTTTTTGGAGAAGCATCATGACCTCGTCATCATTGACCACAGACATTCCAGACACTTTGATGCTGAAGCACTATGCCGGTCAATTAGAGCGGTCAACTCTTCAGAAAACACTGTGATAGTCGCCGTTGTGAAAAGGCCAGACAGAGAAGAAGCCTCTGTGATGCCCTTGATCAATGCCGGCTTTAATAGGAGATACGTGGAGAATGCCAATATGATGGCCTGCTATAATGAGCTGCTACAGTTGGAGCATGGAGAGGTGCGGGCGCAGTTCAAACTGAGGGCTGGAAATGCTATTTTCACAGCTCTAGAACAAAGCCAAGAGGCCATAGAGATCACTTCTGAAGATCAAATAATTCAGTACGTGAACCCTGCCTACGAGTCCATTATGGGCTACCAACAAGGCGAGCTCATAGGGAAGGAAATAATGGAAGTGCCTAAAAGTGAGAAGAATAAGCCTGATCTCCTTGAAACAATAAATTCCTGCATACGGAAAGGAAAGGAGTGGCAGGGGATTTATTATGCCAAAAAGAAGAATGGAGACAGCATTCAGCAAAATGTGAAGATCACACCTGTAATTGGACAGGGAGGAAAAATCAGACACTATGTGTCTATCAACCGGCCtttaaatgataataataagAGTGATAAATCCACTGAACGTGTGCAGGCAGAGTCTCAGACAGACATCCAATCCAGTAAGCACAAAGACCGGAGGAAAGGCTCTCTGGACGTTAGATCCACAACGTCTCGGGGGAGCGATGGGAGCTCACAGCGCAGGCACTCCTCGATGGCCCGAATCCACTCCATGACTATAGAAGCTCCCATCACTAAGGTAATCAACATCATCAATGCAGCGCAGGAAAGCAGCCCTATGCCTGTGGCAGAGGCCTTGGATCGGGTACTGGAGATCCTGAGGACAACTGAGCTCTACTCCCCACAGTTCGGCACCAAGGATGAAGACCCCCATACGAATGATCTCGTGGGGGGGCTGATGACGGATGGTTTACGCAGATTGTCAGGAAATGAATACATATTGGCCACAAAACAGCCCCACCATATCCCCAGTCACTTGACAACTCCTCTGTCTTTAAATGACATCCCACCTCGTATTGCCCAAACCATGGAGAACGAGGAGTCTTGGGACTTTGACATCGTCAACCTGGAGGCTGCAACCATGAGACGGCCTTTGACCTACTTGGGCATGAAGATCTTCTCCCGATTTGGGGTTTGCGAGTTCCTAAACTGCCCTGAGGCCACATTGCGCTCCTGGCTACAAGTGATTGAAGCTAACTACCACTCCAGTAACTCCTACCACAACTCTTCTCATGCAGCTGATGTCCTGCACGCAACGGCGTATTTTCTCTGCAAGGAGAGGGTCAAgCAAAGTTTAGATCCCATTGATGAGGTGGCTGCCCTGATTGCGGCAACTGTGCACGACGTGGACCACCCAGGCCGCACCAACAGCTTCCTGTGCAACGCAGGAAGTGAGCTGGCCATCCTCTACAATGACACCGCCGTGCTAGAGAGCCACCATGCAGCACTGGCCTTCCAGATCACTACAAGAGATGATAAGTGCAACATcttcaaaaacattgaaaggaaTGAATATCGAACACTACGACAGGCCATCATTGATATGGTGCTCGCAACTGAGATGACCAAACACTTTGAACATGTCAACAAATTTGTCAACAGCATCAACAAGCCACTGGCTGCTCTGGAGGAGAATGGGggAAACAATGATGAGGAATCTGTCAAAAGCATTCTGACATCCCCAGAGAATCGCATCCTTGTCAAGCGGATGCTGATTAAGTGTGCAGACATCTCCAATCCATGCAGGCCTCAGGAGCTCTGTATAGAATGGGCCGGACGCATCTCAGAGGAGTATTTTGCACAGACGGATGAGGAGAAGAGACAAGGTCTACCAGTGGTTATGCCTGTGTTTGACAGAAACACGTGTAGCATCCCAAAGTCCCAGATTTCCTTCATAGACTACTTCATTACGGACATGTTTGATGCATGGGATGCTTTTGCAGACCTCCCCAATCTTATGCAGCACTTGGACAACAACTTCAAGTACTGGAAAGGCCTGGATGAGAGGAAGCTGCACAGCCTGCGACCGCCTCCAGAGTAGGCGCTGCAGTGTTTGGCCCTTGGACTCTGCAGTCCAGGGCagccctcctctctcctgctggGGCGTCTCTCTCCCTGCCAGGCCAGCCAGCCAAAAGGCCTCCTCGCCTTCACTCTCTTGCTTCTGTAGCACGCCGAGCGTCCACATGTCCGTCCATACAGAAACCACAGAAGGACTTCCTGACAGACAGTTGCAGCAATAACATTGCTGGCTTTACAACCCTGTCAGATGAGAACTGTGACAAACAGACACGGACAGCATCCTTATGAACTTCTCGTGCCTCTCAGGCATTCGCAGTGTAGCTGGTCAACTGACATGACTGAGAGAGGGTTCTAACAGGCCTCCTGGCAAAGCATCCGTCCCCTAATTACCACGTGGGCGCTGCCTGTGAAGTTGCTGTTTGAGTAAAAACTGCTTGTTTACTGAAGGAGCGAGCAACACTGGAGGAGTGGGTGGAAGTGTGGCCTGGATATGAAGTTGTCCAATCCATGTCAGGCCATATAATCACCTTTGACCTCCATCCCTGTGCTCGCAGCAAGCCAGGACTGCTCATTCTGCCCCTGGAGGCCACACCATGAAAGAACACTCCACTgcttgttttgatttttttgtttgtttgtttttttttgtgcaaaattTTCATGTGTATTTCAAAAACCCATCCAAGTTGACACGTAACTGTCATAACAGACATGGGGGGATGCTTACTTTTTGGGTCAGGGAATGGATCTTTACTTTAGGCCACTGCTGAGACAAAAACCTCAACATCATGATCATAGGTAACTAATTACAGATGATTTGGTATGTTAATTTTTCTTAGATGTTCCATATTTTCTATATTAAAATTCATAAATGAATTAGTTGATGAATAAGaacaaaattaatttcaaaaagagagagaaaagccaAAGCtgatgaagacaaaaaaaataatcatataaaACATTACcatattaaacatttttattttcttatcaaAAGTACAGTACCAGTTTGAATGAACACTTTTGTATTGCACTGTAAACAATATTAGAAATGTCTACGTCTCAGTGATTTGTCCAGGGATGGGATGTTGCATTGTAGAATAAGCTGTTATTGTTGatcatcgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
>XM_039794634.1
AGGAGGGGAGTCCGGTGATTATCTTATACTCTCGCAGCCATCTGAAGAGCTCCGGAGAACTGCTTCtgatattttcaaaaaaacatctAAGCTGTTGTGGAGAGGTGGAGCCATGCAGAGTTGCAGATAGAGCAAGGGTGGTGCGGTCGCCATGGGCGTATTGCCAATTTTAATCCTCCCTTTAGGCCGCAGGGCTGGCGAGGTAATTAAGATTGTACAGTTGGGTATGGCTCTGTCAACAAAGTCACTGTAGGCTAGTGATCTCTTATTCAGGCTCGACAGTCTCTTTTTGTTTAGCTTGTCGTTTGTCATGTTGTCTTGTTGTCATGTATTTGGCTGGACTGAGAAGGAGGAGTGGATGACTGCAATGGAAAGGTTCCCGACCACATTAACAGAGGTGCAATTTGGACCAATGAAGTTATTTAAAGACCCACTTCAGGTACTTTTAGTTTTTGCCAAAGAGGACAGTCAGAGTAATGGCTTCTGCTGGGCATGTGAGAAGGGCAACTTCAGGTGCAGCATGGCACGAACACCCGAGTCTGCTCTTGAATGCTTTTTGGAGAAGCATCATGACCTCGTCATCATTGACCACAGACATTCCAGACACTTTGATGCTGAAGCACTATGCCGGTCAATTAGAGCGGTCAACTCTTCAGAAAACACTGTGATAGTCGCCGTTGTGAAAAGGCCAGACAGAGAAGAAGCCTCTGTGATGCCCTTGATCAATGCCGGCTTTAATAGGAGATACGTGGAGAATGCCAATATGATGGCCTGCTATAATGAGCTGCTACAGTTGGAGCATGGAGAGGTGCGGGCGCAGTTCAAACTGAGGGCTGGAAATGCTATTTTCACAGCTCTAGAACAAAGCCAAGAGGCCATAGAGATCACTTCTGAAGATCAAATAATTCAGTACGTGAACCCTGCCTACGAGTCCATTATGGGCTACCAACAAGGCGAGCTCATAGGGAAGGAAATAATGGAAGTGCCTAAAAGTGAGAAGAATAAGCCTGATCTCCTTGAAACAATAAATTCCTGCATACGGAAAGGAAAGGAGTGGCAGGGGATTTATTATGCCAAAAAGAAGAATGGAGACAGCATTCAGCAAAATGTGAAGATCACACCTGTAATTGGACAGGGAGGAAAAATCAGACACTATGTGTCTATCAACCGGCCtttaaatgataataataagAGTGATAAATCCACTGAACGTGTGCAGGCAGAGTCTCAGACAGACATCCAATCCAGTAAGCACAAAGACCGGAGGAAAGGCTCTCTGGACGTTAGATCCACAACGTCTCGGGGGAGCGATGGGAGCTCACAGCGCAGGCACTCCTCGATGGCCCGAATCCACTCCATGACTATAGAAGCTCCCATCACTAAGGTAATCAACATCATCAATGCAGCGCAGGAAAGCAGCCCTATGCCTGTGGCAGAGGCCTTGGATCGGGTACTGGAGATCCTGAGGACAACTGAGCTCTACTCCCCACAGTTCGGCACCAAGGATGAAGACCCCCATACGAATGATCTCGTGGGGGGGCTGATGACGGATGGTTTACGCAGATTGTCAGGAAATGAATACATATTGGCCACAAAACAGCCCCACCATATCCCCAGTCACTTGACAACTCCTCTGTCTTTAAATGACATCCCACCTCGTATTGCCCAAACCATGGAGAACGAGGAGTCTTGGGACTTTGACATCGTCAACCTGGAGGCTGCAACCATGAGACGGCCTTTGACCTACTTGGGCATGAAGATCTTCTCCCGATTTGGGGTTTGCGAGTTCCTAAACTGCCCTGAGGCCACATTGCGCTCCTGGCTACAAGTGATTGAAGCTAACTACCACTCCAGTAACTCCTACCACAACTCTTCTCATGCAGCTGATGTCCTGCACGCAACGGCGTATTTTCTCTGCAAGGAGAGGGTCAAgCAAAGTTTAGATCCCATTGATGAGGTGGCTGCCCTGATTGCGGCAACTGTGCACGACGTGGACCACCCAGGCCGCACCAACAGCTTCCTGTGCAACGCAGGAAGTGAGCTGGCCATCCTCTACAATGACACCGCCGTGCTAGAGAGCCACCATGCAGCACTGGCCTTCCAGATCACTACAAGAGATGATAAGTGCAACATcttcaaaaacattgaaaggaaTGAATATCGAACACTACGACAGGCCATCATTGATATGGTGCTCGCAACTGAGATGACCAAACACTTTGAACATGTCAACAAATTTGTCAACAGCATCAACAAGCCACTGGCTGCTCTGGAGGAGAATGGGggAAACAATGATGAGGAATCTGTCAAAAGCATTCTGACATCCCCAGAGAATCGCATCCTTGTCAAGCGGATGCTGATTAAGTGTGCAGACATCTCCAATCCATGCAGGCCTCAGGAGCTCTGTATAGAATGGGCCGGACGCATCTCAGAGGAGTATTTTGCACAGACGGATGAGGAGAAGAGACAAGGTCTACCAGTGGTTATGCCTGTGTTTGACAGAAACACGTGTAGCATCCCAAAGTCCCAGATTTCCTTCATAGACTACTTCATTACGGACATGTTTGATGCATGGGATGCTTTTGCAGACCTCCCCAATCTTATGCAGCACTTGGACAACAACTTCAAGTACTGGAAAGGCCTGGATGAGAGGAAGCTGCACAGCCTGCGACCGCCTCCAGAGTAGGCGCTGCAGTGTTTGGCCCTTGGACTCTGCAGTCCAGGGCagccctcctctctcctgctggGGCGTCTCTCTCCCTGCCAGGCCAGCCAGCCAAAAGGCCTCCTCGCCTTCACTCTCTTGCTTCTGTAGCACGCCGAGCGTCCACATGTCCGTCCATACAGAAACCACAGAAGGACTTCCTGACAGACAGTTGCAGCAATAACATTGCTGGCTTTACAACCCTGTCAGATGAGAACTGTGACAAACAGACACGGACAGCATCCTTATGAACTTCTCGTGCCTCTCAGGCATTCGCAGTGTAGCTGGTCAACTGACATGACTGAGAGAGGGTTCTAACAGGCCTCCTGGCAAAGCATCCGTCCCCTAATTACCACGTGGGCGCTGCCTGTGAAGTTGCTGTTTGAGTAAAAACTGCTTGTTTACTGAAGGAGCGAGCAACACTGGAGGAGTGGGTGGAAGTGTGGCCTGGATATGAAGTTGTCCAATCCATGTCAGGCCATATAATCACCTTTGACCTCCATCCCTGTGCTCGCAGCAAGCCAGGACTGCTCATTCTGCCCCTGGAGGCCACACCATGAAAGAACACTCCACTgcttgttttgatttttttgtttgtttgtttttttttgtgcaaaattTTCATGTGTATTTCAAAAACCCATCCAAGTTGACACGTAACTGTCATAACAGACATGGGGGGATGCTTACTTTTTGGGTCAGGGAATGGATCTTTACTTTAGGCCACTGCTGAGACAAAAACCTCAACATCATGATCATAGGTAACTAATTACAGATGATTTGGTATGTTAATTTTTCTTAGATGTTCCATATTTTCTATATTAAAATTCATAAATGAATTAGTTGATGAATAAGaacaaaattaatttcaaaaagagagagaaaagccaAAGCtgatgaagacaaaaaaaataatcatataaaACATTACcatattaaacatttttattttcttatcaaAAGTACAGTACCAGTTTGAATGAACACTTTTGTATTGCACTGTAAACAATATTAGAAATGTCTACGTCTCAGTGATTTGTCCAGGGATGGGATGTTGCATTGTAGAATAAGCTGTTATTGTTGatcatcgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt

Function

symbol description
pde8a Predicted to enable 3',5'-cyclic-nucleotide phosphodiesterase activity and metal ion binding activity. Predicted to be involved in cAMP catabolic process. Predicted to act upstream of or within phosphorelay signal transduction system and regulation of transcription, DNA-templated. Orthologous to human PDE8A (phosphodiesterase 8A).

NR:

description
PREDICTED: high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8A isoform X1

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0035556 intracellular signal transduction biological_process
GO:0000160 phosphorelay signal transduction system biological_process
GO:0046872 metal ion binding molecular_function
GO:0000156 phosphorelay response regulator activity molecular_function
GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity molecular_function

KEGG:

id description
K18437 PDE8; high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039794633.1 True 5104 mRNA 0.46 22 18505528 18557335
XM_039794634.1 False 3865 mRNA 0.47 22 18515850 18557335

Neighbor

gene id symbol gene type direction distance location
gatm gatm,LOC102780634 coding upstream 14460 18486062 ~ 18491068 (+)
hdc hdc,LOC106587893,LOC103379072 coding upstream 46976 18454656 ~ 18458552 (+)
LOC120555692 LOC104956759 coding upstream 66088 18433272 ~ 18439440 (+)
mapk6 mapk6 coding upstream 85978 18403621 ~ 18419550 (+)
leo1 leo1 coding upstream 125182 18362149 ~ 18380346 (+)
LOC120555641 whamm,LOC102778540 coding downstream 28438 18585773 ~ 18604970 (+)
LOC120555930 NA coding downstream 81947 18639282 ~ 18642799 (+)
LOC120556269 tm6sf1 coding downstream 102527 18659862 ~ 18663990 (+)
zrsr2 zrsr2 coding downstream 107172 18664507 ~ 18670988 (+)
phka2 phka2 coding downstream 120006 18677341 ~ 18698498 (+)
G28163 usp8,LOC102785891 non-coding upstream 60232 18444816 ~ 18445296 (+)
LOC120555993 NA non-coding upstream 324327 18004828 ~ 18181201 (+)
G28083 NA non-coding upstream 586332 17918900 ~ 17919196 (+)
G28065 NA non-coding upstream 616311 17888761 ~ 17889217 (+)
G28066 slc24a5,LOC102781271 non-coding upstream 629355 17871746 ~ 17876173 (+)
G28195 homer2 non-coding downstream 49970 18607305 ~ 18615809 (+)
LOC120556026 NA non-coding downstream 288934 18846269 ~ 18847406 (+)
G28393 NA non-coding downstream 496789 19054124 ~ 19055004 (+)
G28394 NA non-coding downstream 500211 19057546 ~ 19057853 (+)
G28396 NA non-coding downstream 514485 19071820 ~ 19072036 (+)
LOC120555788 NA other upstream 762080 17724545 ~ 17743448 (+)
LOC120556001 rbpms2,LOC107381790,LOC103368877,LOC104957780 other upstream 3019077 15475147 ~ 15486451 (+)
LOC120556433 psma4,psa4,LOC106562664 other upstream 3059036 15441455 ~ 15446492 (+)
LOC120556271 tmem138,LOC104922799,LOC102296598,LOC102204478,LOC104956289,LOC103368539,LOC102790175,LOC102222702 other upstream 3451906 15047877 ~ 15053622 (+)
kcna4 kcna4 other upstream 3540466 14889390 ~ 14965062 (+)
LOC120556478 LOC103360749,LOC104942123,LOC102301404 other downstream 4538 18561873 ~ 18575942 (+)
LOC120555697 NA other downstream 516973 19074308 ~ 19087064 (+)
G28581 NA other downstream 929911 19487246 ~ 19487533 (+)
ercc3 ercc3 other downstream 955021 19512356 ~ 19520218 (+)
LOC120555792 pcdh9,LOC102784100 other downstream 1214784 19772119 ~ 19993954 (+)

Expression


Co-expression Network