usp8 (usp8,LOC102785891)


Basic Information

Item Value
gene id usp8
gene name usp8,LOC102785891
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 18439582 ~ 18451019 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039794653.1
GACGCAAAACGTcagagaagatgaagaagagaaTGCGGAACAAGGAGCGAGGATTTTTTTCTATGCCAGGAAACAGCTGTCAAAAGAGTAGCTAAAGTGTAAGCAACGGATCAGAAAGAGATATGTTCAGAGCTTGTGTACAGCACTGAAACTGTGAGCTCTGACTGAACACACCCGCGAAGATGCCTGCAGTTTCCACCGGGGCCAAAGAGCTATATCTGTCCACATCTCTGGCTGAACTCAATAAAAAGGCTGACATCAAGCCGGACAAGACAAGTACCAGAAGCTATGTTCAGAGTGCCTGCAAAATCTTCAAGGCGGCAGAGGAGTGTCGTCTGGACAGAGATGAGGAGAAAGCTTATGTGCTGTACATGAAGTATTTAACAGTATATGACATCATCAAGAAAAGACTAGACTTCAAGCAGCAACCGGAGTACTACATGACCATGCTTGGGCAAAACAGCTTTAAGAAAGCCATTGAAGAAGCCGAGAAGCTCTCTGAAAGCCTTAAACTCAGgtaTGAGGAAGTTGAGGTTCGAAAAAAACTtgaggagatggagagacaagaggagaagaaaaggaaggaggaaataacagaaaaagatgGTCATCCAAAAGTTTCATCGGCAAACAAGAAGGACAGCAAAAAGGTAAAAGGAGAACAGAATGAACTGAAGAATGAATTGAAGAAAGTAACCTCAAAAGCTGCGGTGTCAGCTGGTGGGATCTCAGCTGAGAAGCTTTTCCACATGATGAAGGACCAGACGATTACAATGATTGTCATGGATGCCCGCAGCCACAGGGACTTTGAGGAGTCTCGCATTCAGGTCTCAGGCCAGACCTGCGTCAGCGTGCCTGAGGAGGCCATTAGCCCGGGAATCACTGTGAATCAGATTGAGGCGAAGCTGCCCGAGGTGTCGAAAGAGCATTGGAAGCGGCGGGGGTTTGTGGATTATATAGTCCTGCTGGACTGGTTTAGTTCTGTCACTGACCTTACGCTGGGCACCACCTTGCGGAGCCTCAAAGATGCCCTCTATAAGTGGGATAGCATCACCATCCTGCGTAGTGAGCCACTGGTGCTGGAGGGAGGCTACGAGAACTGGCTGTTGTTTTACCCCATGTACACAACCAACGCTAAAGTCCGCCCCCCTAGACAGAATATCATCAGCTCCCTCCCTCAGTTGAACTTTAGCTACCCATCCCTGGAGGAACCAAAGCCTCCGACCCCACCTCTACCAGAGCCCGAGGCTACACCCGAGCCCCACGAAGCCTCCGCTCCTGTGCTGGTGAACGGGGTTGCACCAGCAGAACCCCCCGCATCTATAACTTCCATGGTGATTGACAGGCTGCCAGACGCTGTCAATTCCACCGTCACAGGCTCTACAAATTCTGAGCAAGATCTTAGTAAGAAGGGCCCTGTGGCAGGCACATCCAGCCAGTCACCTGCAACAGCCAAAGCCTTCCCGCAGTTTGACCGTACCAAGAAACCCTCAGTCCGGGTGTCGGACGAGCCTAAGCCCAGCCACAACGGGTCAGCGAAGGACCCCACGCAGAACGGCCCATTTGTCCCTGACCGCTCAGTCAAACCGCCCCTCGTCTCCAACACTTCTCTGTCTAAAGAAGAACAAAGCCAGATACACTCCGAGGTGGTGGCAGGGATGGAGAAGGCGAGGCAAGAGCAGGAGAAACGCATCCAGGAGCGTCGCGTAGAGGAGGAGAGACGGGAGAAGGAACAGAAGGAAAGGCTAGAAAGGGAACAAAgtgagaagaggaagaaggaagaggaggagaatggacttcaggagaaaaagaaactGGAAAGACAGAAGGCGGAAGAAGAGGGAGATAAAAAGAACAAGCTGTGGGacgagaaagagaggaggggaaaggagcagagctctgacactCCTTCGAAGAGTATGTCTCTGGACTCGCCTGCTCCCAATCATCTTGTTAGTGAAATTAAGAGGGAGCCCCTGACCAGAGCAAGGAGTGAGGAGATGGGTAGAAGTGTACCTGGCCTTCCAGTCGGTTGGATGAAGTTCCTTGACACGGTGACGGGGACCTACCGGTACTACCATTCCCCAACCAACCGTGTCCACCTGTACCCTCCTGAGGTCACTGTTCCCCAGACTCCACCCTCCACGCCACCAACAGTTAAACAGAAAACCCCACGACCAGCTGAGCCAGACACCAACTGTGAACAAGAGCGGGAACAGTCTAAACTGAAACGCTCCTACTCCTCTCCTGATATCAGCCAGGACCTGAGGGAGGAGGCCCAGAAGAAGGCCAGCGCTCCGACCACTGCTGCTGTTATACCCACCATCAACAGAGAGACCAAACCTCCCAGTGCTAAAGTCTATTCCAAAGTCGAGATCGCACGGCCGTCAGCTGCCAAAATTCGCAACCTGAATCCTACATTTGGAGGCAATGGTCCATCCCTGACTGGCCTTCGTAACATGGGCAACACATGCTACATGAACTCCATCTTGCAGTGTCTGTGTAACACTCCTGGCATGGCTGAGTACTTCAACAACAATTTCTACCTGGAGGACATCAACAGGCAAAACATCCTTGGTCATAAAGGGGAGGTGGCGGAGGAGTTTGGTGTGATCATGAAGGCCCTGTGGGCCGGTCTGTACAAGTTCATCAGCCCGCGGGACTTCAAGATCACCATAGGCAAGATCAATGACCAGTTTGCTGGCTATGACCAGCAAGACTCCCAGGAGCTGCTGCTGTTCCTCATGGATGGGCTCCACGAGGACCTCAACAAGAGAGCGGACAACAGGAAGCGGTACAAGGAGGAGGAAAACGACCATCTGGATGATCAGACGGCAGCCGACTTGGCCTGGAGCAAACACAAGCTGCTGAACGAGTCCATCATCGTAGCGCTGTTCCAGGGCCAGTTCAAGTCCACTGTGCAGTGCCTGACCTGCCATCGCAAGTCCCGGACATTTGAGACCTTTATGTACCTGTCGCTGCCTCTGGCCTCCACCAGCAAGTGCTCCCTGCAGGATTGTCTGAGGCTGTTCTCCAAGGAAGAGAAGCTGACGGACAACAACAAGGTGTTCTGCAGACACTGCAAAGCCCACCGAGATTCCACCAAGAAACTGGAGATCTGGAAGGTCCCACCCATTCTCCTGGTGCACCTAAAACGATTCTCCTATGAGGGTAGATGGAAGCAGAAGCTGCAGACGTCTGTAGACTTCTCTCTAGACACTCTGGACCTGGCCCAGTACGTCATCGGACCAAAACAGAGCCTGAAGAGATACAGCCTGTTTGGAGTGTCTAACCACTACGGGGGTTTAGACGGCGGCCATTACACAGCCTACTGTAAGAACGCCCCCAAACAGCGCTGGTACAAGTTTGATGACCACGAGGTGACGgaaatctccacctcctccgtCAAGTCCTCAGCAGCCTACATCCTGTTTTACTCCAACCTGTGACGAAGCCGTAGGACACGGAGAGGGAACACTAGAACACCAGAGCAGCGCACGCTCAAGCCtagagggtgtttttttttttcttcttcttcttcttcttcttctttttaaaatcCCAGCTCTGAGGGAACCTGGTGCACGTCGCTGCGGGTTAACTAGTCGTGTACGTGAACGCGAGGACACACTCGAGCGAGTTGCGATGAGAATCCTTGTCTGTCGCAGATCGGAGGAAGGGGCAGGAACACTGTGCAATGCTTCAGCTACTAGAGGACCCTATACCTGTTTAAACATGCTGTCTGTTCACATTACTGATCATCTAGTGACTAAACAGATGCTCCTTTTACTCTGACTTCTTAACGGTGGCGTTGTAGGGCCGACAGCTGGTTCCGATGCTCTTCGCTCTCATTTCTGTTGCAGTCAGCGGGGATGGCCGTATCGCAGAACGGCTCCGCTTTCTTGTACTGTGTCTACACCAGGGTTACCAGTTGTACATTCTTAACCAATGCTGATGTTGCACATTCAACAATGTAAATACTGGAGGGCAAGGTGTTAATGTGTTAAGTGACCAAATTATGATTTTCAGTAGCAGCCATTATACTGTAGTATCAACCTATTCATAACGACAAAGACTGTGTGTTGGAGGGGGTTTAACTCTATAGCCTTCTGATGTTTTAACATGATCTTCAAGGAGATGGAAGGGAGTGGGTCTCGACTTTTGCATTCTTCGTAAAGAGAGGAGGGAATTGAGATTGTTGCTTGTTCGCATTAGCCACATTGTTGCACTTACACAATATGCAATCCATTTAAGTTGTTTATGTAGAACACGTTGTTTAATAGCAGACATCAATACTCTCCTCAGAATGCTTTAAAACGATGCTGATGCTGAGCTTGTAGGTCTTGCTCGGTCCAGGCAGTGACAGAAAAACCTACCTGCACCTAAACACTTTGTGTGTAGAATTTATTCTCTGTTAAACGTACTTAACTCTTTACATTATTATattcaaacacaacaactatTTAGAGGAAAAATGACATCCTTTAActgcttttcattttatttctgtatcCAGTACTGAGGAGAATACCCGTGAGAATATGAAGACATAAGAAATTGACCTTATTCACTGACACCAGAGCGTCAACATTTGCTGCCTGACCGACCGACCGACTGACTGACAAGAGCAAACTCAAAGTATACcgatgtgttttttgttttttttctgaatggaCCATAGATCTGAGGTGACAGGATTTGATTTCCTGAGCAAAGTTGTATTGCCTAGCATGATATCataatctcttttctttctactTGTAcatgttgattttatttcacAATTTGTTTCAGCTATAATGATTATATTAACCACAAACAACTCATATTTATTAAAACTGCTTCAAATTAG
>XM_039794654.1
GACGCAAAACGTcagagaagatgaagaagagaaTGCGGAACAAGGAGCGAGGATTTTTTTCTATGCCAGGAAACAGCTGTCAAAAGAGTAGCTAAAGTGTAAGCAACGGATCAGAAAGAGATATGTTCAGAGCTTGTGTACAGCACTGAAACTGTGAGCTCTGACTGAACACACCCGCGAAGATGCCTGCAGTTTCCACCGGGGCCAAAGAGCTATATCTGTCCACATCTCTGGCTGAACTCAATAAAAAGGCTGACATCAAGCCGGACAAGACAAGTACCAGAAGCTATGTTCAGAGTGCCTGCAAAATCTTCAAGGCGGCAGAGGAGTGTCGTCTGGACAGAGATGAGGAGAAAGCTTATGTGCTGTACATGAAGTATTTAACAGTATATGACATCATCAAGAAAAGACTAGACTTCAAGCAGCAACCGGAGTACTACATGACCATGCTTGGGCAAAACAGCTTTAAGAAAGCCATTGAAGAAGCCGAGAAGCTCTCTGAAAGCCTTAAACTCAGgtaTGAGGAAGTTGAGGTTCGAAAAAAACTtgaggagatggagagacaagaggagaagaaaaggaaggaggaaataacagaaaaagatgGTCATCCAAAAGTTTCATCGGCAAACAAGAAGGACAGCAAAAAGGTAAAAGGAGAACAGAATGAACTGAAGAATGAATTGAAGAAAGTAACCTCAAAAGCTGCGGTGTCAGCTGGTGGGATCTCAGCTGAGAAGCTTTTCCACATGATGAAGGACCAGACGATTACAATGATTGTCATGGATGCCCGCAGCCACAGGGACTTTGAGGAGTCTCGCATTCAGGTCTCAGGCCAGACCTGCGTCAGCGTGCCTGAGGAGGCCATTAGCCCGGGAATCACTGTGAATCAGATTGAGGCGAAGCTGCCCGAGGTGTCGAAAGAGCATTGGAAGCGGCGGGGGTTTGTGGATTATATAGTCCTGCTGGACTGGTTTAGTTCTGTCACTGACCTTACGCTGGGCACCACCTTGCGGAGCCTCAAAGATGCCCTCTATAAGTGGGATAGCATCACCATCCTGCGTAGTGAGCCACTGGTGCTGGAGGGAGGCTACGAGAACTGGCTGTTGTTTTACCCCATGTACACAACCAACGCTAAAGTCCGCCCCCCTAGACAGAATATCATCAGCTCCCTCCCTCAGTTGAACTTTAGCTACCCATCCCTGGAGGAACCAAAGCCTCCGACCCCACCTCTACCAGAGCCCGAGGCTACACCCGAGCCCCACGAAGCCTCCGCTCCTGTGCTGGTGAACGGGGTTGCACCAGCAGAACCCCCCGCATCTATAACTTCCATGGTGATTGACAGGCTGCCAGACGCTGTCAATTCCACCGTCACAGGCTCTACAAATTCTGAGCAAGATCTTAGTAAGAAGGGCCCTGTGGCAGGCACATCCAGCCAGTCACCTGCAACAGCCAAAGCCTTCCCGCAGTTTGACCGTACCAAGAAACCCTCAGTCCGGGTGTCGGACGAGCCTAAGCCCAGCCACAACGGGTCAGCGAAGGACCCCACGCAGAACGGCCCATTTGTCCCTGACCGCTCAGTCAAACCGCCCCTCGTCTCCAACACTTCTCTGTCTAAAGAAGAACAAAGCCAGATACACTCCGAGGTGGTGGCAGGGATGGAGAAGGCGAGGCAAGAGCAGGAGAAACGCATCCAGGAGCGTCGCGTAGAGGAGGAGAGACGGGAGAAGGAACAGAAGGAAAGGCTAGAAAGGGAACAAAgtgagaagaggaagaaggaagaggaggagaatggacttcaggagaaaaagaaactGGAAAGACAGAAGGCGGAAGAAGAGGGAGATAAAAAGAACAAGCTGTGGGacgagaaagagaggaggggaaaggagcagagctctgacactCCTTCGAAGAGTATGTCTCTGGACTCGCCTGCTCCCAATCATCTTGTTAGTGAAATTAAGAGGGAGCCCCTGACCAGAGCAAGGAGTGAGGAGATGGGTAGAAGTGTACCTGGCCTTCCAGTCGGTTGGATGAAGTTCCTTGACACGGTGACGGGGACCTACCGGTACTACCATTCCCCAACCAACCGTGTCCACCTGTACCCTCCTGAGGTCACTGTTCCCCAGACTCCACCCTCCACGCCACCAACAGTTAAACAGAAAACCCCACGACCAGCTGAGCCAGACACCAACTGTGAACAAGAGCGGGAACAGTCTAAACTGAAACGCTCCTACTCCTCTCCTGATATCAGCCAGGACCTGAGGGAGGAGGCCCAGAAGAAGGCCAGCGCTCCGACCACTGCTGCTGTTATACCCACCATCAACAGAGAGACCAAACCTCCCAGTGCTAAAGTCTATTCCAAAGTCGAGATCGCACGGCCGTCAGCTGCCAAAATTCGCAACCTGAATCCTACATTTGGAGGCAATGGTCCATCCCTGACTGGCCTTCGTAACATGGGCAACACATGCTACATGAACTCCATCTTGCAGTGTCTGTGTAACACTCCTGGCATGGCTGAGTACTTCAACAACAATTTCTACCTGGAGGACATCAACAGGCAAAACATCCTTGGTCATAAAGGGGAGGTGGCGGAGGAGTTTGGTGTGATCATGAAGGCCCTGTGGGCCGGTCTGTACAAGTTCATCAGCCCGCGGGACTTCAAGATCACCATAGGCAAGATCAATGACCAGTTTGCTGGCTATGACCAGCAAGACTCCCAGGAGCTGCTGCTGTTCCTCATGGATGGGCTCCACGAGGACCTCAACAAGGCGGACAACAGGAAGCGGTACAAGGAGGAGGAAAACGACCATCTGGATGATCAGACGGCAGCCGACTTGGCCTGGAGCAAACACAAGCTGCTGAACGAGTCCATCATCGTAGCGCTGTTCCAGGGCCAGTTCAAGTCCACTGTGCAGTGCCTGACCTGCCATCGCAAGTCCCGGACATTTGAGACCTTTATGTACCTGTCGCTGCCTCTGGCCTCCACCAGCAAGTGCTCCCTGCAGGATTGTCTGAGGCTGTTCTCCAAGGAAGAGAAGCTGACGGACAACAACAAGGTGTTCTGCAGACACTGCAAAGCCCACCGAGATTCCACCAAGAAACTGGAGATCTGGAAGGTCCCACCCATTCTCCTGGTGCACCTAAAACGATTCTCCTATGAGGGTAGATGGAAGCAGAAGCTGCAGACGTCTGTAGACTTCTCTCTAGACACTCTGGACCTGGCCCAGTACGTCATCGGACCAAAACAGAGCCTGAAGAGATACAGCCTGTTTGGAGTGTCTAACCACTACGGGGGTTTAGACGGCGGCCATTACACAGCCTACTGTAAGAACGCCCCCAAACAGCGCTGGTACAAGTTTGATGACCACGAGGTGACGgaaatctccacctcctccgtCAAGTCCTCAGCAGCCTACATCCTGTTTTACTCCAACCTGTGA

Function

symbol description
usp8 Predicted to enable thiol-dependent deubiquitinase. Acts upstream of or within regulation of cilium assembly. Predicted to be active in several cellular components, including dendritic spine; midbody; and postsynaptic density. Predicted to be extrinsic component of endosome membrane and extrinsic component of plasma membrane. Human ortholog(s) of this gene implicated in ACTH-secreting pituitary adenoma. Orthologous to human USP8 (ubiquitin specific peptidase 8).

NR:

description
PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like

GO: NA

KEGG:

id description
K11839 USP8, UBP5; ubiquitin carboxyl-terminal hydrolase 8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039794653.1 True 4852 mRNA 0.49 20 18439582 18451019
XM_039794654.1 False 3446 mRNA 0.52 19 18440985 18451019

Neighbor

gene id symbol gene type direction distance location
tmod2 tmod3,LOC102784726,LOC102314562 coding downstream 79372 18335550 ~ 18360210 (-)
lysmd2 lysmd2 coding downstream 111794 18321428 ~ 18327788 (-)
gldn gldn,LOC104962729 coding downstream 196572 18237855 ~ 18243010 (-)
sema6dl sema6d coding downstream 498110 17920329 ~ 17941472 (-)
slc24a5 slc24a5 coding downstream 560749 17871826 ~ 17878833 (-)
LOC120555694 LOC101077645 coding upstream 5531 18456550 ~ 18466081 (-)
LOC120556233 LOC104953026,LOC102209912,LOC102302305,LOC101469394 coding upstream 20695 18471714 ~ 18482023 (-)
LOC120555642 fsd2 coding upstream 124041 18575060 ~ 18584594 (-)
homer2 homer2 coding upstream 156450 18607469 ~ 18639221 (-)
ap1s2 ap1s2,LOC101078094,LOC107095773,LOC103463884,LOC101477195 coding upstream 220333 18671352 ~ 18676489 (-)
G28267 NA non-coding downstream 52974 18385531 ~ 18386608 (-)
G28264 NA non-coding downstream 57203 18381978 ~ 18382379 (-)
G28263 NA non-coding downstream 58060 18381179 ~ 18381522 (-)
LOC120555717 scg3 non-coding downstream 118977 18298911 ~ 18320605 (-)
G28094 NA non-coding downstream 482114 17957015 ~ 17957468 (-)
G28284 NA non-coding upstream 18794 18469813 ~ 18471450 (-)
G28291 NA non-coding upstream 46830 18497849 ~ 18498089 (-)
G28302 pde8a,LOC104953025,LOC106596071,LOC108251619,LOC102210709 non-coding upstream 91439 18542458 ~ 18558219 (-)
G28309 NA non-coding upstream 117082 18568101 ~ 18569077 (-)
G28429 NA non-coding upstream 554889 19005908 ~ 19008421 (-)
G28269 mapk6 other downstream 19083 18416069 ~ 18420499 (-)
G28265 NA other downstream 55940 18382705 ~ 18383642 (-)
G28121 NA other downstream 219032 18218122 ~ 18220550 (-)
c3h15orf48 clg1h15orf48,csgr07h15orf48,LOC103353210,LOC107085327,LOC104951152 other downstream 838192 17599750 ~ 17601390 (-)
G27925 LOC103353204,LOC106512954,LOC102223374,LOC104951141 other downstream 926414 17508123 ~ 17513168 (-)
LOC120556268 btbd1 other upstream 199010 18650029 ~ 18658659 (-)
G28345 NA other upstream 268353 18719372 ~ 18720019 (-)
LOC120555695 NA other upstream 603072 19054091 ~ 19069996 (-)
LOC120555836 pcnp other upstream 672522 19123541 ~ 19126411 (-)
LOC120555658 NA other upstream 3128949 21579968 ~ 21583558 (-)

Expression


Co-expression Network