LOC120555694 (LOC101077645)


Basic Information

Item Value
gene id LOC120555694
gene name LOC101077645
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 18456550 ~ 18466081 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039794656.1
GTTGTTGAAAGTTGAACTTTTCAGCACTCTTGCAGCCGGACTGGCACGTTCCTTCAGATTTATAATGATTGCATATATTCTATACACCATTCTTGCAGGCTTGGCACTTTTGCTGTTACTGCTTTACTTGAGAAACCCTTATATTTTTCAAGATTTAAGTTACACCATTACTGCAATCAAAATTGCTATTCGCATGAGGAAATTCAAGAAGCAGAAACCCTTTTACAGTATTTTGGATTGTTTTCTGGATCAAGTGGCGAGGCAGCCGCATAAGAAGTTCATAGTTTTTGAGGAAAGCTCCTACACTTACAGCCAAGCCGACAAAGAAAGCAACAGAGTGGCCAGAGCTCTGTCCGAGCATGGCCAGCTGAAGGAGGGGGACACGGTGGCCCTCTTCCTGGGCAACGAGCCTCAGTTTGTGTGGATCTGGCTCGCACTGACCAAGCTGGGATGCAAAGCTTCTTTACTGAACTACAACATCCGATCCAAATCTTTGCTGCACTGCTTTTCTTGCTGTGAAGCCAAGGTCCTGGTCGCTGGCGCTGacTTGCGAGGGGCTGTAGAGGAGGTGTTGCCTACCCTGAACCAGCAGGGCGTTCGTGTGTTTATACTCAGCGAGGACTGTGATGTGGAGGGCATTGAAAGCCTCTCGGATAAAATTCAGCAGGCCTCAGACCAGCCTCTGTCGCCTCAGCTGAGGGCCAACATTAACCTTAAGAGCCCTGCGCTGTACATCTACACCTCTGGAACCACAGGGCTTCCCAAGGCAGCTGTAATCAACCATGAGAGGCTATGGATGGCATCTTTTGTTCAGGCTGTTGCTGGCATACGTTCAGACGATATCATCTACGTTTACCTGCCTCTTTACCACAGTTCTGGCTTTCTGATGGGACTTTGTGGGGCCATAGAAAAAGGCATCACTGTTGTTTTAAGACGTAAATTCTCTGCCTCCCACTTTTGGAATGACTGTAGAAAGTATAATGTGACTGTTGTTCAGTACATCGGAGAAATTATGCGCTACCTCTGCAACACACCAAAGAGAGACAATGACAGAGATCATAAAGTCCGATTGGCTTTGGGGAACGGGATAAGGGCCGACACCTGGACTGATTTCCTGCAGCGATTTGGGGACATACGCATCTGTGAATGCTACGGAGCGACAGAAGGAAATATCGGCTTTGTCAACTACGCTGGCAAAGTTGGAGCTATTGGCAAAGAGAATTTTCTCCACAAAatgggATGTCCGTATGCCCTCATAAGGTacgacacagagaaagaggagccAGTCAAAGACTCCCGAGGATTTTGCATCGAAGTCCCCAGAGGAGAGACCGGTTTGTTGGTGGCTAGGATTGCAGAAAGATCACCTTTCGTCGGCTATGCCAAGAACAGTCAgcagacagagaagaagaaggtgaGAGATGTGTTTGTGAAGGGAGACCTCTACTTTAACAGTGGCGACCTTCTGAAGATAGACAACGAGGGATTTGTCTTCTTTCAAGACCGCATTGGAGACACTTTCAGGTGGAAAGGAGAAAATGTGGCAACTACAGAGGTGGCTGATCATTTGCTCATGGTGGACTGCATTAAAGAGGCTAATGTCTATGGTGTGAAGGTGCCAGGACACGAGGGAAGAATTGGAATGGCAGCGCTGACGCTCAAAGAAAACATGGACTTTGACGGCAAAGCTGTATATCAGCACGTCAAAAACTTCCTCCCCAGCTACGCGAGACCACGCTTCATCCGCATACAGGATGCACTGGTAGTGACTGGGACATTTAAGCAAATGAAGGTGAAGCTGGGAGAGGAGGGCTTTAACCCAGCCGTCATCAGGGACCCTTTGTTCTACCTGGAGGACAACAAGGGCTACGTACCTATGACTCAGGAGATATTCAGCTCCATCGCAGAGGGAAGAATCAGGCTCTGAATGAaccTACTTTCATAGATAATTTTTAGTTCTAGAGGTAAGGCTTCAGGTATGGGTTAGAAAGCTCACCAGAATGCTGTGCAGTCAAAGTGAACCATCATCCACTTGGAGGGGTTGAAGACAAAAGAGTGAGCCAATTCAATGCCCTCCAGGGACCAGCGGAGCTCAGGACAGAAGTAGGCTGAGCCAGCGTACGCAGCATCAACATGGAGCCACAGTCCTTCTTCTGCACCTGTAAAAGAACATTTCAATGCAAGTACTGTAATTCTCTGAATGCATCTCAATGGAGCAACACAATGTTTTGACTTTACAGGCTGTGTTTAAACGGACATTATTGGGAGTAAATTTTAAGACGTACAGACTGGTCCCAGTTCAGACAGCTTGTCGAAAGCACACACTCCTGTAGTTCCCAAAGTTGCACACAGCTGAACAGGAGAGACACAAAATCACAGATAAGATGTAAAATGTATTGTCAGTATTTTGttgtatattttaaattaaattaaattaaaaaca

Function

NR:

description
PREDICTED: very long-chain acyl-CoA synthetase-like

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0003824 catalytic activity molecular_function

KEGG:

id description
K08746 SLC27A2, FACVL1, FATP2; solute carrier family 27 (fatty acid transporter), member 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039794656.1 True 2443 mRNA 0.47 11 18456550 18466081

Neighbor

gene id symbol gene type direction distance location
usp8 usp8,LOC102785891 coding downstream 5531 18439582 ~ 18451019 (-)
tmod2 tmod3,LOC102784726,LOC102314562 coding downstream 96340 18335550 ~ 18360210 (-)
lysmd2 lysmd2 coding downstream 128762 18321428 ~ 18327788 (-)
gldn gldn,LOC104962729 coding downstream 213540 18237855 ~ 18243010 (-)
sema6dl sema6d coding downstream 515078 17920329 ~ 17941472 (-)
LOC120556233 LOC104953026,LOC102209912,LOC102302305,LOC101469394 coding upstream 5633 18471714 ~ 18482023 (-)
LOC120555642 fsd2 coding upstream 108979 18575060 ~ 18584594 (-)
homer2 homer2 coding upstream 141388 18607469 ~ 18639221 (-)
ap1s2 ap1s2,LOC101078094,LOC107095773,LOC103463884,LOC101477195 coding upstream 205271 18671352 ~ 18676489 (-)
LOC120556226 LOC103360767 coding upstream 233264 18699345 ~ 18705558 (-)
G28267 NA non-coding downstream 69942 18385531 ~ 18386608 (-)
G28264 NA non-coding downstream 74171 18381978 ~ 18382379 (-)
G28263 NA non-coding downstream 75028 18381179 ~ 18381522 (-)
LOC120555717 scg3 non-coding downstream 135945 18298911 ~ 18320605 (-)
G28094 NA non-coding downstream 499082 17957015 ~ 17957468 (-)
G28284 NA non-coding upstream 3732 18469813 ~ 18471450 (-)
G28291 NA non-coding upstream 31768 18497849 ~ 18498089 (-)
G28302 pde8a,LOC104953025,LOC106596071,LOC108251619,LOC102210709 non-coding upstream 76377 18542458 ~ 18558219 (-)
G28309 NA non-coding upstream 102020 18568101 ~ 18569077 (-)
G28429 NA non-coding upstream 539827 19005908 ~ 19008421 (-)
G28269 mapk6 other downstream 36051 18416069 ~ 18420499 (-)
G28265 NA other downstream 72908 18382705 ~ 18383642 (-)
G28121 NA other downstream 236000 18218122 ~ 18220550 (-)
c3h15orf48 clg1h15orf48,csgr07h15orf48,LOC103353210,LOC107085327,LOC104951152 other downstream 855160 17599750 ~ 17601390 (-)
G27925 LOC103353204,LOC106512954,LOC102223374,LOC104951141 other downstream 943382 17508123 ~ 17513168 (-)
LOC120556268 btbd1 other upstream 183948 18650029 ~ 18658659 (-)
G28345 NA other upstream 253291 18719372 ~ 18720019 (-)
LOC120555695 NA other upstream 588010 19054091 ~ 19069996 (-)
LOC120555836 pcnp other upstream 657460 19123541 ~ 19126411 (-)
LOC120555658 NA other upstream 3113887 21579968 ~ 21583558 (-)

Expression


Co-expression Network