nr1h3 (nr1h3,LOC102777562)


Basic Information

Item Value
gene id nr1h3
gene name nr1h3,LOC102777562
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 14811445 ~ 14828395 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039794709.1
CACCCAGCAGCCGAGCCGCTGAGGCTGAATCACATGATGATTATGCTAGCTAGTGAGCTAACGTGCTAAGTTCGGTTGTCAAAGCTGCTGTCAACAGCCACAAACGGACGGAGTGGCATACCCCAACTAACAAGTAGTTGAACACTCGTCAAGTAAACACATTTTGCCATGTGTGATGAAAAGGACATGTCTTCTTTCCTACTCGCTGTCTTCAAGATATCGAGTCATTAAACTTCCGCCCAATAACTCACTGGGATTTTGGCATCCTCAAGACTCATCACGCAAGCAAATACTCCATCAACTCAGGAATATTGACAGAATGAGGTTGTGGACTCACATGGCCAGGATGGGTAGACGATAAATAAGACATCAACTTCAGAGGTACAAGTGGATTTCGTAATGACAAGCTGCTGTGCAGAAGATGTCCACGTTGTCTGTGACTGATATCCCAGATGTTGGTCATGATGAGAGTAAGGTGTTTGACGGGGCCTCTGAGCTGCAGCTGGACTGCTTGGTTGAGGAGAGCAGTGGAAGCACCACAATGAAGCACGACGGCCTGCTGTCGCTGGCTGACCTCTCCCAGCCAGATGACTTCCCCGCCACCCCCCTTAATGGCCCTTTACTGACTGACATGAGTAGCCCTCTGCAGGTCGAGCCGGGGGACATTAAGCTGGACCCATCTGCAGGTGACACATCTGCTGCCAGCATAGATGGTCAGCCAGTGAAGAGAAAGAAGGGGCCTGCGCCAAAAATGCTGGGCAATGAGGTGTGCAGCGTATGTGGCGACAAGGCCTCTGGTTTCCATTACAACGTGTTGAGCTGCGAGGGCTGCAAGGGCTTCTTTCGACGCAGCGTCATTAAAAGTGCCCAGTACAACTGCAAGAACAACGGCCGCTGTGAAATGGACATGTACATGCGGCGCAAGTGCCAGCAGTGCCGCCTGCGCAAGTGTCGGGAGGCGGGCATGCTGGAGCAGTGTGTGCTTTCTGAGGAGCAAATCCGACTGAAGAAGATGAAAAAGCAGCACGAGGAGGAAACGGCCCGCACATCCACAGTGGTCACCCCCACTCCTCCACAGGAAACGGCCGCACTGGATCCACAGCAGCAGGACATGATTGAGAAGCTGGTGTCCATGCAGAAGCAATGCAACAAAAGGTCTTTCCTTGACCGACCGAAAGTGACGCCGTGGCCACAGAGTCAGGACATGCAGAACCGAGAAGTGCGTCAGCAGCGGTTCGCCCACTTCACTGAGCTTGCAATCATGTCAGTCCAGGAGATTGTGGATTTCGCTAAACAGCTTCCTGGTTTCCTGGAGCTCACGAGGGAGGACCAGATTGCTCTGTTGAAGACGTCGACCATTGAGATTATGCTGCTAGAGACATCTCGGCGGTACAACCCAGCTATCGATAGCATTACGTTTCTGAAGGATTTCAGCTATAATAAGGAGGATTTCGCCAAAGCAGGGCTTCAGTTTGAGTTCATAAACCCCATCTTTGAGTTTTCAAAAGGAATGAATGACCTACACCTGGACGAAGCAGAATACGCCCTGCTCATCGCCATCAACATCTTTTCTGCAGATCGGCCAAACGTGCAGGACCATGAGCTGGTGGAGAGGCTGCAGCAGCCCTACGTGGACGCGTTGCGCTCTTACATCATGATAAAGAGATCAAATGATCATTTGATGTTTCCCCGCATGCTGATGAAGTTGGTGAGCCTTCGTACACTAAGCAGCGTCCACTCGGAGCAGGTTTTTGCCCTTCGCCTCCAGGACAAGAAGCTCCCCCCGCTGCTCTCTGAAATCTGGGACGTCAATGAGTGACCGCAAACCTGATATCCCACTCTTCCTGAAGCCTGAGAGGGACACGGCATCCAGCAGGACCACTGACTCCTTTCTGCCCATCTGGTCAGGGATTGGTTATAGCGTtgagagtttttatttttatttttttctctcgtGGGAGGAGAGCACCATTGCCCAATGCTCTGAAACGGACTGCTAAATGGGTTTGTGTGTTCGTGAGGAGGAACATCAACACCTAATTGTCTTTTTGTTGTTCTTACTTTTGTGTAGATGCTGACATGATCATGGCGATGTTAAACACCAGCATCGGGCTCTTTAGCCAGTCTTCTTAGATATAATATTTGTtgaaggggaactatgcagtttttttttagcttaatttaccttaacagCTTCGGAGACATTGGAATGGTtagatgactttttttttttcgagttgaatggtggccGTCTCGCTCCCTCCCCCCTAGCGCCtatgagcggaaaaaccacccttgcaacctTTGGCCGGCGGGCCaccggcctcagcgtcaggaagtatcgcgtgatatcaggtcttgcgatgtaacgaattgcattaggcactgcacacatacagcaaccggctagctataagaacatggtagcgatggagtttttcacactacctaaagcattgtcggaggaacagagtgcagaggaaacggcagactggcCGAGCGAGTTTTTACAACAttgttgccaaatatctattccaaagctgtagggggagctctatagagaaacctgcgagcaaaaagcgaagagattgccaaaactgcatagcgccccttttaAAAGTTATGTCAATTTCTAGTGCAGTTCTATACTCATCCTCTAAATGCTTATAATCTGAGCAGGTCTTGGCTGTGGCTGCTTCAAACGTCAGGATTACAGCTGCACATTTGGTTGAAATAGTGATCTTTGCAGTCGTGCAATAGGTGGAAATAGATGCCGAGTTAAGCATGAGCAGACGCACATCTGCTGTTTACTTTATTGATGTTAGGGTAAAATGGTAGGCCATCTGGTTGGTGTTGTGCATTGTGGTGTGGCAACAAATAGTTTGTTCCTTTTTGGAGTAAGTGCAGAAATCAAAAGGTTTGTGTAGTCGCTCAGGTAAAGTTACGGAAGTAGACCTCTCGGAATCGGAGGCTTCTTTAATTTCCATTCGATTACTTTAGTTTCCTTCCAAGTGCATAAGGGACCTTTTTGGTCATTTATAGATTCATCCATTAACGGTCAGATCCATTAACTTTCATgtaatttgtatatttattttcacAAGAAAAATGTATAGAGTGCACACATAGATTGTACAATCACATACTAATGCACAAATAAGTAAAACTCTGCAGAATGTGCCCTCATTTACAGGAAACAGTCTTTTTTACACATAGCACAGGTACCTTGAAATGGGCGATACTAATGTGTCTTCAAATTCCATGTAAAGGTTAAGTGTAAAAAAGAAAGTATGTCAAGCTACCATCTCTGTGACCTTCTtaacaaaatgaataaaaatccATCCTGACACAGTTGTATTCTGAATCAAAATAGAAAAACAATTGCCTCTATTAACACCTTTTTTCGTCACGTTTGTGAGATGTACTATTATTGATTTCATTACAAAGCAGTTCGGTTATGTTcatattttgatttgttttatcaCTATCATTTAAAGTTGTGAGAAATGTATAAGTAACATACATATAGTTTGAACATATGGAGAGTttgacttccttttttatttttgataatACTGTATGAATGCCACTGAGGAAAACGTGTACAGTATAGCTGAATATCGGGTGGAAAACTTCTCTTGATCTAAAGGTCTACCATGGTCCGAGTATCTTCCTTGAACAGGTACTCGACGCCACACAGCTTTAACTGGTCAGATTTTGGAAAGCCTCtctaagaaaaaaatatataccaaAATCTTTATCGACAGGGAGCAGAGAACAACAGGAAATGAGTAGAAACATTAACATTTGGTGTACTCATGCTGTTTTTTTCCATGCGTTCTCCTGTGCAGTGTAAACTTGATATGCATAACGGAtgataaagaaatgtcaatgcAAAATTA
>XM_039794710.1
CACCCAGCAGCCGAGCCGCTGAGGCTGAATCACATGATGATTATGCTAGCTAGTGAGCTAACGTGCTAAGTTCGGTTGTCAAAGCTGCTGTCAACAGCCACAAACGGACGGAGTGGCATACCCCAACTAACAAGTAGTTGAACACTCGTCAAGTAAACACATTTTGCCATGTGTGATGCACTCTATGAAAACATGTTCATGGACAAAGGTGACTGGCTGATAAGATGCAGGGGACATTGGACTTGTGCAGACAGATCAGTGTGGGGATGACATGAGAAAAGGACATGTCTTCTTTCCTACTCGCTGTCTTCAAGATATCGAGTCATTAAACTTCCGCCCAATAACTCACTGGGATTTTGGCATCCTCAAGACTCATCACGCAAGCAAATACTCCATCAACTCAGGAATATTGACAGAATGAGGTTGTGGACTCACATGGCCAGGATGGGTAGACGATAAATAAGACATCAACTTCAGAGGTACAAGTGGATTTCGTAATGACAAGCTGCTGTGCAGAAGATGTCCACGTTGTCTGTGACTGATATCCCAGATGTTGGTCATGATGAGAGTAAGGTGTTTGACGGGGCCTCTGAGCTGCAGCTGGACTGCTTGGTTGAGGAGAGCAGTGGAAGCACCACAATGAAGCACGACGGCCTGCTGTCGCTGGCTGACCTCTCCCAGCCAGATGACTTCCCCGCCACCCCCCTTAATGGCCCTTTACTGACTGACATGAGTAGCCCTCTGCAGGTCGAGCCGGGGGACATTAAGCTGGACCCATCTGCAGGTGACACATCTGCTGCCAGCATAGATGGTCAGCCAGTGAAGAGAAAGAAGGGGCCTGCGCCAAAAATGCTGGGCAATGAGGTGTGCAGCGTATGTGGCGACAAGGCCTCTGGTTTCCATTACAACGTGTTGAGCTGCGAGGGCTGCAAGGGCTTCTTTCGACGCAGCGTCATTAAAAGTGCCCAGTACAACTGCAAGAACAACGGCCGCTGTGAAATGGACATGTACATGCGGCGCAAGTGCCAGCAGTGCCGCCTGCGCAAGTGTCGGGAGGCGGGCATGCTGGAGCAGTGTGTGCTTTCTGAGGAGCAAATCCGACTGAAGAAGATGAAAAAGCAGCACGAGGAGGAAACGGCCCGCACATCCACAGTGGTCACCCCCACTCCTCCACAGGAAACGGCCGCACTGGATCCACAGCAGCAGGACATGATTGAGAAGCTGGTGTCCATGCAGAAGCAATGCAACAAAAGGTCTTTCCTTGACCGACCGAAAGTGACGCCGTGGCCACAGAGTCAGGACATGCAGAACCGAGAAGTGCGTCAGCAGCGGTTCGCCCACTTCACTGAGCTTGCAATCATGTCAGTCCAGGAGATTGTGGATTTCGCTAAACAGCTTCCTGGTTTCCTGGAGCTCACGAGGGAGGACCAGATTGCTCTGTTGAAGACGTCGACCATTGAGATTATGCTGCTAGAGACATCTCGGCGGTACAACCCAGCTATCGATAGCATTACGTTTCTGAAGGATTTCAGCTATAATAAGGAGGATTTCGCCAAAGCAGGGCTTCAGTTTGAGTTCATAAACCCCATCTTTGAGTTTTCAAAAGGAATGAATGACCTACACCTGGACGAAGCAGAATACGCCCTGCTCATCGCCATCAACATCTTTTCTGCAGATCGGCCAAACGTGCAGGACCATGAGCTGGTGGAGAGGCTGCAGCAGCCCTACGTGGACGCGTTGCGCTCTTACATCATGATAAAGAGATCAAATGATCATTTGATGTTTCCCCGCATGCTGATGAAGTTGGTGAGCCTTCGTACACTAAGCAGCGTCCACTCGGAGCAGGTTTTTGCCCTTCGCCTCCAGGACAAGAAGCTCCCCCCGCTGCTCTCTGAAATCTGGGACGTCAATGAGTGACCGCAAACCTGATATCCCACTCTTCCTGAAGCCTGAGAGGGACACGGCATCCAGCAGGACCACTGACTCCTTTCTGCCCATCTGGTCAGGGATTGGTTATAGCGTtgagagtttttatttttatttttttctctcgtGGGAGGAGAGCACCATTGCCCAATGCTCTGAAACGGACTGCTAAATGGGTTTGTGTGTTCGTGAGGAGGAACATCAACACCTAATTGTCTTTTTGTTGTTCTTACTTTTGTGTAGATGCTGACATGATCATGGCGATGTTAAACACCAGCATCGGGCTCTTTAGCCAGTCTTCTTAGATATAATATTTGTtgaaggggaactatgcagtttttttttagcttaatttaccttaacagCTTCGGAGACATTGGAATGGTtagatgactttttttttttcgagttgaatggtggccGTCTCGCTCCCTCCCCCCTAGCGCCtatgagcggaaaaaccacccttgcaacctTTGGCCGGCGGGCCaccggcctcagcgtcaggaagtatcgcgtgatatcaggtcttgcgatgtaacgaattgcattaggcactgcacacatacagcaaccggctagctataagaacatggtagcgatggagtttttcacactacctaaagcattgtcggaggaacagagtgcagaggaaacggcagactggcCGAGCGAGTTTTTACAACAttgttgccaaatatctattccaaagctgtagggggagctctatagagaaacctgcgagcaaaaagcgaagagattgccaaaactgcatagcgccccttttaAAAGTTATGTCAATTTCTAGTGCAGTTCTATACTCATCCTCTAAATGCTTATAATCTGAGCAGGTCTTGGCTGTGGCTGCTTCAAACGTCAGGATTACAGCTGCACATTTGGTTGAAATAGTGATCTTTGCAGTCGTGCAATAGGTGGAAATAGATGCCGAGTTAAGCATGAGCAGACGCACATCTGCTGTTTACTTTATTGATGTTAGGGTAAAATGGTAGGCCATCTGGTTGGTGTTGTGCATTGTGGTGTGGCAACAAATAGTTTGTTCCTTTTTGGAGTAAGTGCAGAAATCAAAAGGTTTGTGTAGTCGCTCAGGTAAAGTTACGGAAGTAGACCTCTCGGAATCGGAGGCTTCTTTAATTTCCATTCGATTACTTTAGTTTCCTTCCAAGTGCATAAGGGACCTTTTTGGTCATTTATAGATTCATCCATTAACGGTCAGATCCATTAACTTTCATgtaatttgtatatttattttcacAAGAAAAATGTATAGAGTGCACACATAGATTGTACAATCACATACTAATGCACAAATAAGTAAAACTCTGCAGAATGTGCCCTCATTTACAGGAAACAGTCTTTTTTACACATAGCACAGGTACCTTGAAATGGGCGATACTAATGTGTCTTCAAATTCCATGTAAAGGTTAAGTGTAAAAAAGAAAGTATGTCAAGCTACCATCTCTGTGACCTTCTtaacaaaatgaataaaaatccATCCTGACACAGTTGTATTCTGAATCAAAATAGAAAAACAATTGCCTCTATTAACACCTTTTTTCGTCACGTTTGTGAGATGTACTATTATTGATTTCATTACAAAGCAGTTCGGTTATGTTcatattttgatttgttttatcaCTATCATTTAAAGTTGTGAGAAATGTATAAGTAACATACATATAGTTTGAACATATGGAGAGTttgacttccttttttatttttgataatACTGTATGAATGCCACTGAGGAAAACGTGTACAGTATAGCTGAATATCGGGTGGAAAACTTCTCTTGATCTAAAGGTCTACCATGGTCCGAGTATCTTCCTTGAACAGGTACTCGACGCCACACAGCTTTAACTGGTCAGATTTTGGAAAGCCTCtctaagaaaaaaatatataccaaAATCTTTATCGACAGGGAGCAGAGAACAACAGGAAATGAGTAGAAACATTAACATTTGGTGTACTCATGCTGTTTTTTTCCATGCGTTCTCCTGTGCAGTGTAAACTTGATATGCATAACGGAtgataaagaaatgtcaatgcAAAATTA
>XM_039794711.1
CCACCCAGCAGCCGAGCCGCTGAGGCTGAATCACATGATGATTATGCTAGCTAGTGAGCTAACGTGCTAAGTTCGGTTGTCAAAGCTGCTGTCAACAGCCACAAACGGACGGAGTGGCATACCCCAACTAACAAGTAGTTGAACACTCGTCAAGTAAACACATTTTGCCATGTGTGATGAAAAGGACATGTCTTCTTTCCTACTCGCTGTCTTCAAGATATCGAGTCATTAAACTTCCGCCCAATAACTCACTGGGATTTTGGCATCCTCAAGACTCATCACGCAAGCAAATACTCCATCAACTCAGGAATATTGACAGAATGAGGTTGTGGACTCACATGGCCAGGATGGGTAGACGATAAATAAGACATCAACTTCAGAGGTAAGGTACAAGTGGATTTCGTAATGACAAGCTGCTGTGCAGAAGATGTCCACGTTGTCTGTGACTGATATCCCAGATGTTGGTCATGATGAGAGTAAGGTGTTTGACGGGGCCTCTGAGCTGCAGCTGGACTGCTTGGTTGAGGAGAGCAGTGGAAGCACCACAATGAAGCACGACGGCCTGCTGTCGCTGGCTGACCTCTCCCAGCCAGATGACTTCCCCGCCACCCCCCTTAATGGCCCTTTACTGACTGACATGAGTAGCCCTCTGCAGGTCGAGCCGGGGGACATTAAGCTGGACCCATCTGCAGGTGACACATCTGCTGCCAGCATAGATGGTCAGCCAGTGAAGAGAAAGAAGGGGCCTGCGCCAAAAATGCTGGGCAATGAGGTGTGCAGCGTATGTGGCGACAAGGCCTCTGGTTTCCATTACAACGTGTTGAGCTGCGAGGGCTGCAAGGGCTTCTTTCGACGCAGCGTCATTAAAAGTGCCCAGTACAACTGCAAGAACAACGGCCGCTGTGAAATGGACATGTACATGCGGCGCAAGTGCCAGCAGTGCCGCCTGCGCAAGTGTCGGGAGGCGGGCATGCTGGAGCAGTGTGTGCTTTCTGAGGAGCAAATCCGACTGAAGAAGATGAAAAAGCAGCACGAGGAGGAAACGGCCCGCACATCCACAGTGGTCACCCCCACTCCTCCACAGGAAACGGCCGCACTGGATCCACAGCAGCAGGACATGATTGAGAAGCTGGTGTCCATGCAGAAGCAATGCAACAAAAGGTCTTTCCTTGACCGACCGAAAGTGACGCCGTGGCCACAGAGTCAGGACATGCAGAACCGAGAAGTGCGTCAGCAGCGGTTCGCCCACTTCACTGAGCTTGCAATCATGTCAGTCCAGGAGATTGTGGATTTCGCTAAACAGCTTCCTGGTTTCCTGGAGCTCACGAGGGAGGACCAGATTGCTCTGTTGAAGACGTCGACCATTGAGATTATGCTGCTAGAGACATCTCGGCGGTACAACCCAGCTATCGATAGCATTACGTTTCTGAAGGATTTCAGCTATAATAAGGAGGATTTCGCCAAAGCAGGGCTTCAGTTTGAGTTCATAAACCCCATCTTTGAGTTTTCAAAAGGAATGAATGACCTACACCTGGACGAAGCAGAATACGCCCTGCTCATCGCCATCAACATCTTTTCTGCAGATCGGCCAAACGTGCAGGACCATGAGCTGGTGGAGAGGCTGCAGCAGCCCTACGTGGACGCGTTGCGCTCTTACATCATGATAAAGAGATCAAATGATCATTTGATGTTTCCCCGCATGCTGATGAAGTTGGTGAGCCTTCGTACACTAAGCAGCGTCCACTCGGAGCAGGTTTTTGCCCTTCGCCTCCAGGACAAGAAGCTCCCCCCGCTGCTCTCTGAAATCTGGGACGTCAATGAGTGACCGCAAACCTGATATCCCACTCTTCCTGAAGCCTGAGAGGGACACGGCATCCAGCAGGACCACTGACTCCTTTCTGCCCATCTGGTCAGGGATTGGTTATAGCGTtgagagtttttatttttatttttttctctcgtGGGAGGAGAGCACCATTGCCCAATGCTCTGAAACGGACTGCTAAATGGGTTTGTGTGTTCGTGAGGAGGAACATCAACACCTAATTGTCTTTTTGTTGTTCTTACTTTTGTGTAGATGCTGACATGATCATGGCGATGTTAAACACCAGCATCGGGCTCTTTAGCCAGTCTTCTTAGATATAATATTTGTtgaaggggaactatgcagtttttttttagcttaatttaccttaacagCTTCGGAGACATTGGAATGGTtagatgactttttttttttcgagttgaatggtggccGTCTCGCTCCCTCCCCCCTAGCGCCtatgagcggaaaaaccacccttgcaacctTTGGCCGGCGGGCCaccggcctcagcgtcaggaagtatcgcgtgatatcaggtcttgcgatgtaacgaattgcattaggcactgcacacatacagcaaccggctagctataagaacatggtagcgatggagtttttcacactacctaaagcattgtcggaggaacagagtgcagaggaaacggcagactggcCGAGCGAGTTTTTACAACAttgttgccaaatatctattccaaagctgtagggggagctctatagagaaacctgcgagcaaaaagcgaagagattgccaaaactgcatagcgccccttttaAAAGTTATGTCAATTTCTAGTGCAGTTCTATACTCATCCTCTAAATGCTTATAATCTGAGCAGGTCTTGGCTGTGGCTGCTTCAAACGTCAGGATTACAGCTGCACATTTGGTTGAAATAGTGATCTTTGCAGTCGTGCAATAGGTGGAAATAGATGCCGAGTTAAGCATGAGCAGACGCACATCTGCTGTTTACTTTATTGATGTTAGGGTAAAATGGTAGGCCATCTGGTTGGTGTTGTGCATTGTGGTGTGGCAACAAATAGTTTGTTCCTTTTTGGAGTAAGTGCAGAAATCAAAAGGTTTGTGTAGTCGCTCAGGTAAAGTTACGGAAGTAGACCTCTCGGAATCGGAGGCTTCTTTAATTTCCATTCGATTACTTTAGTTTCCTTCCAAGTGCATAAGGGACCTTTTTGGTCATTTATAGATTCATCCATTAACGGTCAGATCCATTAACTTTCATgtaatttgtatatttattttcacAAGAAAAATGTATAGAGTGCACACATAGATTGTACAATCACATACTAATGCACAAATAAGTAAAACTCTGCAGAATGTGCCCTCATTTACAGGAAACAGTCTTTTTTACACATAGCACAGGTACCTTGAAATGGGCGATACTAATGTGTCTTCAAATTCCATGTAAAGGTTAAGTGTAAAAAAGAAAGTATGTCAAGCTACCATCTCTGTGACCTTCTtaacaaaatgaataaaaatccATCCTGACACAGTTGTATTCTGAATCAAAATAGAAAAACAATTGCCTCTATTAACACCTTTTTTCGTCACGTTTGTGAGATGTACTATTATTGATTTCATTACAAAGCAGTTCGGTTATGTTcatattttgatttgttttatcaCTATCATTTAAAGTTGTGAGAAATGTATAAGTAACATACATATAGTTTGAACATATGGAGAGTttgacttccttttttatttttgataatACTGTATGAATGCCACTGAGGAAAACGTGTACAGTATAGCTGAATATCGGGTGGAAAACTTCTCTTGATCTAAAGGTCTACCATGGTCCGAGTATCTTCCTTGAACAGGTACTCGACGCCACACAGCTTTAACTGGTCAGATTTTGGAAAGCCTCtctaagaaaaaaatatataccaaAATCTTTATCGACAGGGAGCAGAGAACAACAGGAAATGAGTAGAAACATTAACATTTGGTGTACTCATGCTGTTTTTTTCCATGCGTTCTCCTGTGCAGTGTAAACTTGATATGCATAACGGAtgataaagaaatgtcaatgcAAAATTA

Function

symbol description
nr1h3 Enables nuclear receptor activity. Acts upstream of or within several processes, including embryonic viscerocranium morphogenesis; lipid homeostasis; and regulation of intestinal lipid absorption. Predicted to be located in nucleus. Is expressed in several structures, including brain; digestive system; eye; heart; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in obesity and type 2 diabetes mellitus. Orthologous to several human genes including NR1H3 (nuclear receptor subfamily 1 group H member 3).

NR:

description
oxysterols receptor LXR-alpha isoform X1

GO:

id name namespace
GO:0006357 regulation of transcription by RNA polymerase II biological_process
GO:0043401 steroid hormone mediated signaling pathway biological_process
GO:0030522 intracellular receptor signaling pathway biological_process
GO:0005634 nucleus cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0004879 nuclear receptor activity molecular_function
GO:0003707 steroid hormone receptor activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K08536 NR1H3, LXRA; liver X receptor alpha

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039794709.1 False 3902 mRNA 0.46 11 14811445 14828394
XM_039794710.1 True 4000 mRNA 0.46 12 14811445 14828394
XM_039794711.1 False 3908 mRNA 0.46 11 14811445 14828395

Neighbor

gene id symbol gene type direction distance location
madd madd coding downstream 6678 14740192 ~ 14804767 (-)
muc15 NA coding downstream 157261 14638986 ~ 14654184 (-)
lingo1b LOC103361724 coding downstream 561113 14225777 ~ 14250332 (-)
kcnq1.1 kcnq1,LOC101467915,LOC102292488,LOC102797067,LOC100697082 coding downstream 657997 14101129 ~ 14153448 (-)
trpm5 trpm5 coding downstream 720985 14062036 ~ 14090460 (-)
LOC120556084 NA coding upstream 49627 14878022 ~ 14881139 (-)
LOC120556194 cd151,LOC104922780,LOC103368535 coding upstream 189169 15017564 ~ 15043882 (-)
tspan4a tspan4,LOC102780031,LOC107381782 coding upstream 353325 15181720 ~ 15356059 (-)
LOC120555953 LOC104955210,LOC103368874,LOC100700844,LOC104922787,LOC101483392 coding upstream 590557 15418952 ~ 15427599 (-)
LOC120556362 slc25a44,LOC104955209 coding upstream 605027 15433422 ~ 15437488 (-)
LOC120556013 NA non-coding downstream 102783 14692209 ~ 14708662 (-)
G27395 fibin,LOC103373419,LOC106523552 non-coding downstream 105229 14703059 ~ 14706216 (-)
G27344 NA non-coding downstream 198116 14613115 ~ 14613329 (-)
LOC120556357 NA non-coding downstream 233650 14573451 ~ 14577795 (-)
G27322 NA non-coding downstream 283318 14527842 ~ 14528127 (-)
G27425 arl14ep,LOC102778030 non-coding upstream 26330 14854725 ~ 14862463 (-)
G27433 NA non-coding upstream 61382 14889777 ~ 14890063 (-)
G27438 NA non-coding upstream 121183 14949578 ~ 14949985 (-)
G27440 NA non-coding upstream 124290 14952685 ~ 14953344 (-)
G27441 NA non-coding upstream 125143 14953538 ~ 14953891 (-)
LOC120556476 NA other downstream 231434 14578027 ~ 14580011 (-)
G27321 NA other downstream 341100 14469758 ~ 14470345 (-)
G27075 LOC104939823,LOC100707594 other downstream 1715679 13069996 ~ 13095766 (-)
G26924 LOC108281047 other downstream 2506621 12304539 ~ 12304824 (-)
G26891 NA other downstream 2849673 11960701 ~ 11961772 (-)
G27420 NA other upstream 14318 14842713 ~ 14843905 (-)
cfap70 LOC103368539,LOC102222702,LOC102790175,LOC102296598,LOC102204478,LOC104922799 other upstream 222267 15050662 ~ 15078830 (-)
LOC120556162 znf609 other upstream 1243174 16071569 ~ 16159882 (-)
LOC120555730 adamts7 other upstream 1493568 16321963 ~ 16408868 (-)
LOC120556401 LOC104927750,LOC104949847,LOC103353195 other upstream 2365118 17193513 ~ 17284509 (-)

Expression


Co-expression Network