arnt2 (arnt2)


Basic Information

Item Value
gene id arnt2
gene name arnt2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 9153242 ~ 9229577 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039794769.1
TTCAAGCAACCCTAAAATCTCGCGGTGCTACCATTCAGACATCTTGCATTTCACTAAATCTGGTCTTGGAgaacattttcattaaaaatacactatatatacacCGCACAGAAACAGGCTGTTTTAGTCGTTTGAACGAGGATTAGTTTTTCTCCGGATGTGAGGCGGTTGGACCGAGCCTCGCGTGCTAATCCCGCGGAGTTTAGACGGTCTCTCACGGGGGCTCTTTAGCCGTATTGTGCGTCATCTCCATCGCTCGCTGCcgttttgttatttttctccATTGAGGAAACATGGCAACTCCCGCCGCTGTCAACCCGTCCGAGATGGGCAGTGAGTTGCCAGGGACAGTAGCCATGCCTGGGGCCGTTGGAGCCAGTCAGGTGAGGATGGGCGGGACTGTGCCAGGCCGCGGGGGCAAGAGGAGATCAGGAGGAATGGACTTTGACGACGAAGACGGAGAGGGACCTAGCAAATTTTCAAGgtatgatgatgatgatcagaTTCCTGGTGGGGGAAAGGAGAGATACGCCAGAGAGAACCACAGTGAGATTGAGCGACGCCGGCGCAACAAAATGACCCAGTACATCACCGAGCTGTCGGACATGGTCCCTACCTGCAGCGCGCTGGCCCGGAAACCGGATAAACTGACCATCCTGCGTATGGCTGTCTCCCATATGAAATCCATGAGGGGCACCGGCAACACGTCCACCGATGGCGCCTACAAGCCCTCCTTTCTCACTGAACAGGAACTGAAGCATCTGATCCTGGAGGCGGCGGACGGCTTCCTGTTTGTGGTTGCTGCGGAGACGGGACGGGTGATCTACGTGTCGGACTCGGTGACGCCGGTGCTGAACCATCCCCAGTCGGAGTGGTTTGGCAGCACTCTTTATGAACAGGTCCACCCCGACGACGTGGACAAGCTGAGGGAACAGCTCAGTACTTCAGAAAACTCCATGACAGGACGGATTCTGGACCTGAAGACAGGAACAGTGAAGAAGGAGGGACAGCAGTCCTCCATGAGGATGTGCATGGGGTCCCGGCGCTCCTTCATCTGCCGCATGAGgtgCGGTAGTGCTCCTCTGGATCACATCTCCCTAAACCGTCTGTCTACCATGAGGAAGAGATACAGGAATGGCCTTGGACCCTCAAAAGAAGGAGAGGCTCAGTACTCTGTGGTGCATTGCACTGGCTACATCAAAGCATGGCCTCctgcagGTATGACTATACCAGAAGAAGACACAGAGGCGGGTCAGACTGGAAAATACTGCCTGGTGGCCATTGGAAgactgcagGTGACCAGCTCTCCAGTCTCTATGGACATGAACGGTCTGTCAGTGCCTACAGAGTTCCTGTCACGTCACAACTCGGATGGTGTCATCACTTTCGTCGACCCGCGCTGCATCAACGTCATTGGTTACCAGCCTCAGGACTTGCTGGGGAAAGATATCCTGGAGTTCTGCCATCCCGAGGACCAGAGTCACCTGAGGGAAAGTTTCCAACAGGTGGTGAAGTTGAAGGGTCAGGTTCTGTCTGTGATGTACCGTTTCCGCATGAAGAACAGGGAATGGATGCTGATCCGAACCAGCAGCTTCACCTTCCAGAACCCATACTCTGATGAGATAGAGTACATCATCTGCACCAACACCAACGTCAAgcagctacaacagcagcagcaggcagagcTGGAGGTTCACCAGAGGGATGGACTGACTGCCTACGATCTTTCCCAGGTGCCTGTGGCCAGCGTCAGCAGCGGAGTCCATGAGGCCGGGAAGAACATCGACAAGACAGAAATCCTGTTCTCCCAGGAGAGAGACCCACGCTTTGCTGAGATGTACACTGGCATCTCTGGCtcggGAGATAAGAAGATGATGGTTCCCTCCTCTACAGCTGGAGGCCAGCAGCTCTACTCACAGAGCTCTCCCTTCCAGCAGGGACATGCTGGCAAAAGCTTCAGTTCCTCTGTGATCCATGTCCCCGGTGTGAATGACATCCAGCCATCAGGCTCATCCAATCAGAATCTAGCTCAGATCTCCAGACAGCTCAATCCCGGCCAGGTGGCATGGTCAGGCAACCGACCCCCCTTCTCtggacagCCCAGTAAAGCCCAGTCCAGTCCCTTTGGTATTGGTTCTGGTCACAGCTACCAGACAGACCCGGCCTCATACAGTCCCCTGTCATCCCCGGCCACTTCCTCCCCCAGCGGCAACGCCTACTCAGGACTGACAAACCGCAGCACAGCTTTTGATGTGTCGGGGGAGAGCAGTCAGAGTGGAGCCCAGTTCCAGGGGCGTCCCAGTGAGGTCTGGTCCCAGTGGCAGAACCAGCATcactcacagcaggccggggaaCAGCACACACACCCCAACCCCAGCCAGACAGAAGTCttccagGACATGTTACCGATGGCTGGCGATCCTACCCAGGGAACAGCCAACTACAACATTGAGGACTTTGCCGACCTCGGCATGTTCCCACCCTTCTctgagtaaagaaaaaaaaccttttctcCATCACTCTCCCTCTCAGAACTGGACTGATGTTTGCATTCATCTGTcatgttgttttcatttttctaatATTGCTGGATCGccaacacacagctgatgtgatGTCTGTCTACACGTgtcatacacaacacacagttCACTCACCGTTTGGGCTCCGCGGCCTGCAGTATTTATCTGTGAACTTACACATACCTCATCTTTGTAAAGAGGAACCCTGCTGACAGATGGAAGGCACACCAATCAACCTGGATCAGCTCTCTGACTGTCATTACAATGATACACACATCGTCTCGAGCTCTTAGAACAAACGGGACATTCAGGTTGCTGAAATTGTTCACTGCATTCAGCGCCAGCATGACCAGAGGAGGGCAGTCACGTGATTGTAGCTCTTTTGACTCTAATGAAACACTAGTCATCTAATAAAGTTTGTTGCCTCATGGCCGTGTGCTCCAGAATACATTGGACCAAATCTCTGAAGTCTTTCCTGACCAGATTGCCGTTCTCTGAGCGTACCGGACAGGTTTCTCTGTGAGGCGGTTGAAGTGTGTTAAACCTCTTCCTTCATGTGATTATAGCTGTATTTGTCAGAGACTAGTATCAGTATTATTATTCAAGATTTTACACTTCCTCTCTCTAAAAATGTCCACATGGTAGCGCTATGGCAATATGGAACAAATCAGATATCAAgatattttttaacaaataaccTCAAGGTCGATATTGCAGCGATATtatagggttgactattggtcactattgcagcctttaaaaccaggaaaagacatcaCTTGTGTCACGATATCcgaaatctaagatgatatcgagtctcatatatcgatgtcAATATAATATCGGCACCATTTGTGTCAGCGGTTCATGTCTGCAAGCATCAACGCAGATGACCAAAATTTAGGACTATGCCAATTGCACATACACTACACCCAATGTTCCGTATACGTACTGTCTTTCAGCGCACCTCAGCACTGCTCTGTTGTTGAATGCTAAACAAGCAAGTTTGTGTGCAAGCTCTCCGGGGGAATATCCATTGATTGGTTTTTTGGACCAATGGTTTTGGAGAAAAGTGGGGGAAAGTAACGCCTCCGCCTTTAACGCGAAGTCCAAAGGCACAATGGTGTTCCATACAAAGTGTATCAACGGCGCAAATTGTTTGATCTGTTAAATAATGAAAATTCAGTGTTAAAatagtccatccatccatctacgtCCGCATCTTCGAGCAGAGGCAATGCTGCCGCATCTTTAATAATTAAGACCCGGGACTGTTTAATAATGGTTTACGGTAGGCCCACACagaaatgtgcacaaaaaatatTAGGCTAATGGGTCTAGTAGTAGGCTATGCAAGATTAGCTGTGGACAGGCAATTGAGTtacttaattaataaaataatgcgTTAGACAACTAGTTACTGCCTAGTTGCTTTAACACGTTTGTCTCCACACTTATCAGTCATTCTGCTGTCAACAACAAAGGGACATTCTCTGTCAAGCTGGGTTAAAGCTAGGTTTATGGTCGCTGCGGTGTTCACAGCGCGAGGTGCGCAAGCCATGAAATGACGTCTCCGCAAGTTGTCGTGGCGCGTGGTCGTGCACCTCTGAACGTTTCAGGCAGTACGCTACAGGGTGACTGCTCCTCAACTGCTGCAGAGCATTAACAGTTAGTACAGTCCATGTCATCTTAAGGTAGTAGCCCAGAGAGTCTCTGCTGCAGCCGGTCTGTTCCGGATCAAGTTGTTTCATGCAGGCCTTTTTGATAGGATTAGTTAAGCTAATGTTGTTGGACAACTGAAACACGCTGCAGTAAATTTGACCTAAATTGTAATATCTTGATTTTACAGTAATATGTTATTATATCATTTAACATGTCActcttaagccctattcgcacgggataagtattacctggggacctcttgtagtttataaattacccccacacgtctgtatttcgtctggcgcattcacacgggataactgaagt
>XM_039794771.1
TTTATTCAAGCAACCCTAAAATCTCGCGGTGCTACCATTCAGACATCTTGCATTTCACTAAATCTGGTCTTGGAgaacattttcattaaaaatacactatatatacacCGCACAGAAACAGGCTGTTTTAGTCGTTTGAACGAGGATTAGTTTTTCTCCGGATGTGAGGCGGTTGGACCGAGCCTCGCGTGCTAATCCCGCGGAGTTTAGACGGTCTCTCACGGGGGCTCTTTAGCCGTATTGTGCGTCATCTCCATCGCTCGCTGCcgttttgttatttttctccATTGAGGAAACATGGCAACTCCCGCCGCTGTCAACCCGTCCGAGATGGGCAGTGAGTTGCCAGGGACAGTAGCCATGCCTGGGGCCGTTGGAGCCAGTCAGGTGAGGATGGGCGGGACTGTGCCAGGCCGCGGGGGCAAGAGGAGATCAGGAGGAATGGACTTTGACGACGAAGACGGAGAGGGACCTAGCAAATTTTCAAGAGAGAACCACAGTGAGATTGAGCGACGCCGGCGCAACAAAATGACCCAGTACATCACCGAGCTGTCGGACATGGTCCCTACCTGCAGCGCGCTGGCCCGGAAACCGGATAAACTGACCATCCTGCGTATGGCTGTCTCCCATATGAAATCCATGAGGGGCACCGGCAACACGTCCACCGATGGCGCCTACAAGCCCTCCTTTCTCACTGAACAGGAACTGAAGCATCTGATCCTGGAGGCGGCGGACGGCTTCCTGTTTGTGGTTGCTGCGGAGACGGGACGGGTGATCTACGTGTCGGACTCGGTGACGCCGGTGCTGAACCATCCCCAGTCGGAGTGGTTTGGCAGCACTCTTTATGAACAGGTCCACCCCGACGACGTGGACAAGCTGAGGGAACAGCTCAGTACTTCAGAAAACTCCATGACAGGACGGATTCTGGACCTGAAGACAGGAACAGTGAAGAAGGAGGGACAGCAGTCCTCCATGAGGATGTGCATGGGGTCCCGGCGCTCCTTCATCTGCCGCATGAGgtgCGGTAGTGCTCCTCTGGATCACATCTCCCTAAACCGTCTGTCTACCATGAGGAAGAGATACAGGAATGGCCTTGGACCCTCAAAAGAAGGAGAGGCTCAGTACTCTGTGGTGCATTGCACTGGCTACATCAAAGCATGGCCTCctgcagGTATGACTATACCAGAAGAAGACACAGAGGCGGGTCAGACTGGAAAATACTGCCTGGTGGCCATTGGAAgactgcagGTGACCAGCTCTCCAGTCTCTATGGACATGAACGGTCTGTCAGTGCCTACAGAGTTCCTGTCACGTCACAACTCGGATGGTGTCATCACTTTCGTCGACCCGCGCTGCATCAACGTCATTGGTTACCAGCCTCAGGACTTGCTGGGGAAAGATATCCTGGAGTTCTGCCATCCCGAGGACCAGAGTCACCTGAGGGAAAGTTTCCAACAGGTGGTGAAGTTGAAGGGTCAGGTTCTGTCTGTGATGTACCGTTTCCGCATGAAGAACAGGGAATGGATGCTGATCCGAACCAGCAGCTTCACCTTCCAGAACCCATACTCTGATGAGATAGAGTACATCATCTGCACCAACACCAACGTCAAgcagctacaacagcagcagcaggcagagcTGGAGGTTCACCAGAGGGATGGACTGACTGCCTACGATCTTTCCCAGGTGCCTGTGGCCAGCGTCAGCAGCGGAGTCCATGAGGCCGGGAAGAACATCGACAAGACAGAAATCCTGTTCTCCCAGGAGAGAGACCCACGCTTTGCTGAGATGTACACTGGCATCTCTGGCtcggGAGATAAGAAGATGATGGTTCCCTCCTCTACAGCTGGAGGCCAGCAGCTCTACTCACAGAGCTCTCCCTTCCAGCAGGGACATGCTGGCAAAAGCTTCAGTTCCTCTGTGATCCATGTCCCCGGTGTGAATGACATCCAGCCATCAGGCTCATCCAATCAGAATCTAGCTCAGATCTCCAGACAGCTCAATCCCGGCCAGGTGGCATGGTCAGGCAACCGACCCCCCTTCTCtggacagCCCAGTAAAGCCCAGTCCAGTCCCTTTGGTATTGGTTCTGGTCACAGCTACCAGACAGACCCGGCCTCATACAGTCCCCTGTCATCCCCGGCCACTTCCTCCCCCAGCGGCAACGCCTACTCAGGACTGACAAACCGCAGCACAGCTTTTGATGTGTCGGGGGAGAGCAGTCAGAGTGGAGCCCAGTTCCAGGGGCGTCCCAGTGAGGTCTGGTCCCAGTGGCAGAACCAGCATcactcacagcaggccggggaaCAGCACACACACCCCAACCCCAGCCAGACAGAAGTCttccagGACATGTTACCGATGGCTGGCGATCCTACCCAGGGAACAGCCAACTACAACATTGAGGACTTTGCCGACCTCGGCATGTTCCCACCCTTCTctgagtaa

Function

symbol description
arnt2 Enables DNA-binding transcription factor activity. Involved in regulation of transcription, DNA-templated; response to hypoxia; and signal transduction. Acts upstream of or within several processes, including animal organ development; neuron differentiation; and positive regulation of transcription, DNA-templated. Predicted to be located in cytoplasm. Predicted to be part of aryl hydrocarbon receptor complex. Predicted to be active in nucleus. Is expressed in several structures, including gut; hatching gland; mandibular arch skeleton; nervous system; and vasculature. Orthologous to human ARNT2 (aryl hydrocarbon receptor nuclear translocator 2).

NR:

description
PREDICTED: aryl hydrocarbon receptor nuclear translocator 2 isoform X2

GO: NA

KEGG:

id description
K15589 ARNT2; aryl hydrocarbon receptor nuclear translocator 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039794769.1 True 4514 mRNA 0.50 20 9153242 9229573
XM_039794771.1 False 2448 mRNA 0.55 19 9155261 9229577

Neighbor

gene id symbol gene type direction distance location
LOC120555843 LOC104937892 coding downstream 1846912 7304084 ~ 7306330 (-)
LOC120555919 NA coding downstream 2100765 7045853 ~ 7052477 (-)
hdgfl3 LOC103366351,LOC102309090,LOC101465811,LOC100694012,LOC106907470 coding downstream 2111101 7028566 ~ 7042141 (-)
LOC120556367 LOC104932139,LOC100695351,LOC108237907,LOC102197162,LOC103129685,LOC106520888,LOC101465514,LOC103366349,LOC102224277 coding downstream 2130070 7005842 ~ 7023172 (-)
LOC120556364 NA coding downstream 2170881 6970278 ~ 6982361 (-)
fah fah coding upstream 79020 9308597 ~ 9325288 (-)
chsy1 chsy1 coding upstream 898401 10127978 ~ 10231722 (-)
selenos NA coding upstream 1003887 10233464 ~ 10241227 (-)
zgc:113274 NA coding upstream 1014547 10244124 ~ 10245386 (-)
snrpa1 snrpa1 coding upstream 1029654 10259231 ~ 10292924 (-)
G26232 NA non-coding downstream 316333 8836064 ~ 8836909 (-)
LOC120556469 NA non-coding downstream 594488 8552479 ~ 8558754 (-)
LOC120555518 NA non-coding downstream 662501 8490284 ~ 8490741 (-)
LOC120556139 NA non-coding downstream 752756 8396268 ~ 8400486 (-)
LOC120555295 NA non-coding downstream 765555 8386976 ~ 8387687 (-)
G26278 NA non-coding upstream 17530 9247107 ~ 9247424 (-)
G26299 NA non-coding upstream 67181 9296758 ~ 9297750 (-)
G26322 NA non-coding upstream 113968 9343545 ~ 9344861 (-)
LOC120556388 NA non-coding upstream 121731 9351308 ~ 9354489 (-)
G26355 NA non-coding upstream 379858 9609435 ~ 9610939 (-)
LOC120555589 cemip other downstream 174098 8759601 ~ 8979144 (-)
tlnrd1 mesdc1 other downstream 394434 8733419 ~ 8758808 (-)
il16 LOC102796330 other downstream 455620 8630608 ~ 8697622 (-)
LOC120555934 NA other downstream 656607 8494353 ~ 8496635 (-)
G26071 mex3b other downstream 1006341 8144207 ~ 8146901 (-)
G26298 NA other upstream 65491 9295068 ~ 9296746 (-)
mtfmt mtfmt,LOC102776665,LOC102776373 other upstream 2246929 11476506 ~ 11510300 (-)
LOC120555651 NA other upstream 2413654 11643231 ~ 11669269 (-)
G26891 NA other upstream 2731124 11960701 ~ 11961772 (-)
G26924 LOC108281047 other upstream 3074962 12304539 ~ 12304824 (-)

Expression


Co-expression Network