ttc17 (ttc17,LOC103361721)


Basic Information

Item Value
gene id ttc17
gene name ttc17,LOC103361721
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 14017552 ~ 14048294 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039794844.1
TGAGCGCCGCCGGCAGGCCGGAGGTTGCCCTGCTACAGAGCAAAATGAGACAGAAAAATGGCGGACGTCAGGAAAATCTGTCCCGAGTATTTGCCCTGTCGTGTCAACTATTCGCGGAAAACCACATTTCAGGGGAAGCTTTTCGTCCTTCTTTGCATCCTTATAGTGGACTCCGGAGGAGCTACGACCCATTGGGTTGTCACGGAGGATGGGAAAATTCAACAACAAGTTGACTCACCTTTGAATCTAAAGCATCCTCACGACGTTGTGATCTTCATGAGGCAAGAGACTCGTGTTAACTACCTCAAGAAGCTGGAGAAGCAGCTTGTGGCACAGAAGATTCACATTGAGGAGAACgaggacagagacacagggcTGGAACAGAGACACTACAAAGAGGATGCGGACTGCGTCATGGCTAAGGTACCCCTGGGAGACCTGGATCTGTATGATGGTACTTATATTTCCCTGGAAAGCAAAGACATCAGCCCAGAAGAATATGTGGATTCCCGGTCAGCTCTGCCCCCAGATCTAGAGAAGCCTGACTGTGCCATAGTGTTTGAACTACCTTATAGTATCCATGCTTTTCAACATCTCAGGGGTGTGCAGGAGAGGGCAAACTTGACCTCCCCTCTGCTTTCTAAGGAAGATCCCATTTTTAGTTCATTGTCTCATAAGCTGGGCCGCAGTGTTGATGAGTTGGGCCATCGCATCCATCAAGGGTTACTGAGGAACTCATCGTCCTGGGTGCTGTACAACATGGCATCATTTTACTGGCGTATGAAGAACGAGCCTCAGAGAGCAGTGGACTGTGTAGTGCGTGCTCTGCATTTCTCCCCAAGGCAGCACAAGGATGTAGCCCTGGTCAACATGGCCAACATCCTGCACCGTGCCCATTTCTCAGCCGATGCCGCTATTCTCGCCCACGCTGCCCTGGACCTAACATCCGATCTGTTCACCAGCCACTACACCTTAGGAAACATTTATGCTATGCTTGGGGAATACAACCACTCCGTGCTGTGTTACGAGCAGGCACTGCAGGCCCAGCCAGGCTTTGAACAGGCCCTGAGGAGGAAACATGCCGTGCTCTGTCAGCAAAAGCTGGAGCAGCGCCTGGAAGCCCAGCACAGATCCCTGCAGCGGACACTGAATGAACTGAAGGAGTACCAGAAGCAGCATGACCACTACCTTCGCCAGCAGGAGGCACTGGACAAACACAAGCTGCTGCAGGAAGAGCAGATCCTGCGCAACATTATCCATGAGACCCAGATGGCTAAGGAAGCCCAACTTGGGAACCATCAGATGTGTCGGCTGGGTCAGCAGCAGCGCAGCCTCTACTGCCCCTTCGACCTGCCTGTGCGCTATCACCGCGGTGATGTGTTTGAGCATGTCCATTATGTCCAATTTGGGGAGGAGGTGTCAGTGGCATCCAGTGTGGCACTTGTGTCCGAGCGCAACTCAAACCAGACGGCAGCCAGCCCCCAGCTTCATCCCTCTGTGTCCGGAGACCATGACCCTGCTGCTGCCCTCTGGAGCAGCCATCAGGATTACACACAGGACATACAGAAGATGTTGTGGCCTCAGAGGACCAACTGTGTCCACGAGTACCCAAGTGTTCCCCCTGCTCACCTGCTGCCTACCTACTACCTTCCACCTGAAACTCAGGGCCTCAGCCCAGTGGCAACTCTGCTCTATGGGAGCAGCAGTCCTCCTCTGACAGTAGCTCTGCCAAACTGTGGTCCCGTCCCCCAACCATATCCAGCCCTCCTGCCTGCCTCGCTAGACTGGCCTCTGGAAGAAAAGATGCTGCCAGATCCCTCTGCCTCccagATACTGCAGTTACGTAGTGGAGGATGGACGCTGGAGCAGATTGGCTCCAGAATAGCTCAAGCTATGAAACAAgcCACTGTACCCCGCTGGCAGGTCCAGAATGAGGCAGCTCTATTCTGGCGGGCCAAAGGCAATGGCAGCCGTGCCCTGCAGTGCCTGCGCCAAGTTTTGAGCTCAGCCCCGCCTTCCCACCGCCACTTGTCCCTCACCAACGCTGCTAACCTGCTGCTACATCACGGCTTGACCACCCACGCACAAACACTGCTGGAGCAAGCACTGGCTCTCAATGCATCAGAGCCCCACACCCTGCTCAGCCTGGTGAGCGTGCAGCTGGCCCAGGGCAACGTGACGGGTGCTCTGGCGTTGTTCCGCCACATCCTGGCGACggccctttcctcctcctcttccttctcatCCTTTGCTGGCTGCGAACAGTGTCGCACCAGCCTACCTCTGCTGCGTTGTCTGCAGTTCTACCCCTTCCTTTACAATCTCTCCCACCGGCAGCCCTGCCCACAGGGTGCTGCCTGCGTGGCTGAGAAGGACCTTGGTATACAGCTGGAGGAATGGGAGGGCATCGAAGAGAATCAGGATGTGCCAGCCATTTCTGCCATGGAGGACTCCTTGCTCTTTGAGAAGGTTATCTTGGACAGCAATGGGTCAGGGGAGGCAGCTGGACAGCAGCGGGCCTCTCCCTCTGCCTCAGGAACAGCTAAGATGGCCACCCCctttggtggtggtggaggagtgGAAGGGGAAGAGGAGTGGCAGCTGAAAGAGGACCTGATGGGAGCCTTCGAGGGAGCACTGGATGTTGGAGGCAAACGAGGGGACCTGCGAGGTATCCGGGTGCTGAAGAATGACCGTGTCATGGGTGCCCGTGCCGGTGGTGGGCCCTGCTTCGGAAACTGTGAGGATGACGAGGGAGCTGAGTGGATCACCTTCCAGGTGAAGCGGGTCAGGAAGGCTAAGGTGGATGGCATAGAGAGTGTTGCCAGCGCTGATGATGGCCAGAATGGGGAGTCCCTGCCTGGAGGACACTCTGTCTTGGAGATAAGTGGGCCAACTATCCCATCGCCTGGCCCTTCAGGCCGCTGGAGGGACTACACAAGTCTTGGCTGGCCAGGGCCTGAGGAGTGCCAGCGGACACGAAGGGTAGACCTTACCACTGTAGCTAGCACCTGGTTGGCTGTTTCTGCCAAGAACATTGACATTACAGAGCACATAGACTTTGCCACTCCACTGCAGGAGCCAGCTGCTGAACCTTTATGCAACGCCAACCTAGCTGCCAGTATGCACACACTCGACCACCTGGCGGGGGTGGCCAATCGTGCCGCCATCCACTACACCGGAGAGAGCCAACTGCGCGAGGTCCTGCAGAATCTCGGTAAAGATAAGTTCTCCCCTCAGTCCTTTGAGCAGGTGGGAACGCGCATCGCTAAAGTACTGGAGAAGAATCAGACATCGTGGGTATTATCCAGCATGGCCGCTCTGtactggagggtgaaaggtcAAGGCAAGAGAGCCATCGACTGCCTGCGACAGGCCCTCAACTACGCCCCCCATCACATGAAGGACGTGCCCCTCATCAGCCTGGCCAACATCTTCCAGAACGCTCGGCTATGGGAGGACGCTCTCACGGTCGCCCGTATGGCAGTAGAAATCGCCCCGCACTTTGTCGTCAACCACTTTACCCTCGCCAACGTCTATATAGCGATGGAGGAGTTTGAGAAAGCCATGCGCTGGTACGAGTCTACGTTGAAGCTGCAGCCAGAGTTCGCCCCTGCCAAAGATCGGCTGAGAACCATCCAGTGTTACCTGCTCACCAAGAGGGAACGCCGTCAGCCCTAAACCGCTCCACCAGTTTGATCACAAGGAGTAACCCACAATCATGCACACACTAGataaccaacacacacacacacacacacacacactcactcatctgAAGACCACCGATAAGAAGCACAAAATGAAAGTGTAAGAAACGTTTTATGTGGTTAAAGGTGAGGTGTCAAGATCCATATCCAGTAGAATCTGGGCTCTAACTCCCCCGAAGAATTAGGTTCGAAACGTCACAGAAGTACAACTGTAGATAATTCTGCCCCCCCGCCACTACTTACAGTATGTCAAATGCAGGACCTCTTGTTATCAAACAATCAAGACGTTGGGATTGTCAGACTCGGTTTTTTTCTAGGTTTGCTTGACTTGCAAAAATGGAATTGAACAAGATTTGAAAATCCCAGTGAATTCTTCAGCGACATTTTGATTTCAACCGCTGCTAATTGGAAGAAAACTCACATTGTCATTCGTTAAGACATTTTAGCATTTTGGTATGAGGAGGAGGCATCTAGGAGGTTCTCCAGGATAATAACATACTACAGCCTGGAGATGGCGCCATGTTTTAATGTAACCTGATtggacattttaaaagaaaaggatGTTATACAGTCTTATGCTGAGATGGTAAGGAATGTGCCTCGCAACTCCGAGGTTAAAGGAGTTTGAATTGAACGTTATATGCCCTCAATATTTCTGCTTCATAAAATGGATGGGAATTCTCAGtttttgcactttttatttttctttatcatTCCTATTTCTATGGGACCTACAAACTTTGATTTTGCTCCAAGgtaatttaaatacaaaagagAGAAACTGAAATACGCTATAACATTTGCTTCTTAACTTATGGAAATCATAAGGCAGAAAAAGGATTTGCCATTGACCatctataataaaaaaaaaaaaaagtggaatcTGTATTTAATGTACAGTATTAAAGGCAGTGTGTGGATTTCATTAGTTAA
>XM_039794845.1
GTGAGCGCCGCCGGCAGGCCGGAGGTTGCCCTGCTACAGAGCAAAATGAGACAGAAAAATGGCGGACGTCAGGAAAATCTGTCCCGAGTATTTGCCCTGTCGTGTCAACTATTCGCGGAAAACCACATTTCAGGGGAAGCTTTTCGTCCTTCTTTGCATCCTTATAGTGGACTCCGGAGGAGCTACGACCCATTGGGTTGTCACGGAGGATGGGAAAATTCAACAACAAGTTGACTCACCTTTGAATCTAAAGCATCCTCACGACGTTGTGATCTTCATGAGGCAAGAGACTCGTGTTAACTACCTCAAGAAGCTGGAGAAGCAGCTTGTGGCACAGAAGATTCACATTGAGGAGAACgaggacagagacacagggcTGGAACAGAGACACTACAAAGAGGATGCGGACTGCGTCATGGCTAAGGTACCCCTGGGAGACCTGGATCTGTATGATGGTACTTATATTTCCCTGGAAAGCAAAGACATCAGCCCAGAAGAATATGTGGATTCCCGGTCAGCTCTGCCCCCAGATCTAGAGAAGCCTGACTGTGCCATAGTGTTTGAACTACCTTATAGTATCCATGCTTTTCAACATCTCAGGGGTGTGCAGGAGAGGGCAAACTTGACCTCCCCTCTGCTTTCTAAGGAAGATCCCATTTTTAGTTCATTGTCTCATAAGCTGGGCCGCAGTGTTGATGAGTTGGGCCATCGCATCCATCAAGGGTTACTGAGGAACTCATCGTCCTGGGTGCTGTACAACATGGCATCATTTTACTGGCGTATGAAGAACGAGCCTCAGAGAGCAGTGGACTGTGTAGTGCGTGCTCTGCATTTCTCCCCAAGGCAGCACAAGGATGTAGCCCTGGTCAACATGGCCAACATCCTGCACCGTGCCCATTTCTCAGCCGATGCCGCTATTCTCGCCCACGCTGCCCTGGACCTAACATCCGATCTGTTCACCAGCCACTACACCTTAGGAAACATTTATGCTATGCTTGGGGAATACAACCACTCCGTGCTGTGTTACGAGCAGGCACTGCAGGCCCAGCCAGGCTTTGAACAGGCCCTGAGGAGGAAACATGCCGTGCTCTGTCAGCAAAAGCTGGAGCAGCGCCTGGAAGCCCAGCACAGATCCCTGCAGCGGACACTGAATGAACTGAAGGAGTACCAGAAGCAGCATGACCACTACCTTCGCCAGCAGGAGGCACTGGACAAACACAAGCTGCTGCAGGAAGAGCAGATCCTGCGCAACATTATCCATGAGACCCAGATGGCTAAGGAAGCCCAACTTGGGAACCATCAGATGTGTCGGCTGGGTCAGCAGCAGCGCAGCCTCTACTGCCCCTTCGACCTGCCTGTGCGCTATCACCGCGGTGATGTGTTTGAGCATGTCCATTATGTCCAATTTGGGGAGGAGGTGTCAGTGGCATCCAGTGTGGCACTTGTGTCCGAGCGCAACTCAAACCAGACGGCAGCCAGCCCCCAGCTTCATCCCTCTGTGTCCGGAGACCATGACCCTGCTGCTGCCCTCTGGAGCAGCCATCAGGATTACACACAGGACATACAGAAGATGTTGTGGCCTCAGAGGACCAACTGTGTCCACGAGTACCCAAGTGTTCCCCCTGCTCACCTGCTGCCTACCTACTACCTTCCACCTGAAACTCAGGGCCTCAGCCCAGTGGCAACTCTGCTCTATGGGAGCAGCAGTCCTCCTCTGACAGTAGCTCTGCCAAACTGTGGTCCCGTCCCCCAACCATATCCAGCCCTCCTGCCTGCCTCGCTAGACTGGCCTCTGGAAGAAAAGATGCTGCCAGATCCCTCTGCCTCccagATACTGCAGTTACGTAGTGGAGGATGGACGCTGGAGCAGATTGGCTCCAGAATAGCTCAAGCTATGAAACAACCCCACACCCTGCTCAGCCTGGTGAGCGTGCAGCTGGCCCAGGGCAACGTGACGGGTGCTCTGGCGTTGTTCCGCCACATCCTGGCGACggccctttcctcctcctcttccttctcatCCTTTGCTGGCTGCGAACAGTGTCGCACCAGCCTACCTCTGCTGCGTTGTCTGCAGTTCTACCCCTTCCTTTACAATCTCTCCCACCGGCAGCCCTGCCCACAGGGTGCTGCCTGCGTGGCTGAGAAGGACCTTGGTATACAGCTGGAGGAATGGGAGGGCATCGAAGAGAATCAGGATGTGCCAGCCATTTCTGCCATGGAGGACTCCTTGCTCTTTGAGAAGGTTATCTTGGACAGCAATGGGTCAGGGGAGGCAGCTGGACAGCAGCGGGCCTCTCCCTCTGCCTCAGGAACAGCTAAGATGGCCACCCCctttggtggtggtggaggagtgGAAGGGGAAGAGGAGTGGCAGCTGAAAGAGGACCTGATGGGAGCCTTCGAGGGAGCACTGGATGTTGGAGGCAAACGAGGGGACCTGCGAGGTATCCGGGTGCTGAAGAATGACCGTGTCATGGGTGCCCGTGCCGGTGGTGGGCCCTGCTTCGGAAACTGTGAGGATGACGAGGGAGCTGAGTGGATCACCTTCCAGGTGAAGCGGGTCAGGAAGGCTAAGGTGGATGGCATAGAGAGTGTTGCCAGCGCTGATGATGGCCAGAATGGGGAGTCCCTGCCTGGAGGACACTCTGTCTTGGAGATAAGTGGGCCAACTATCCCATCGCCTGGCCCTTCAGGCCGCTGGAGGGACTACACAAGTCTTGGCTGGCCAGGGCCTGAGGAGTGCCAGCGGACACGAAGGGTAGACCTTACCACTGTAGCTAGCACCTGGTTGGCTGTTTCTGCCAAGAACATTGACATTACAGAGCACATAGACTTTGCCACTCCACTGCAGGAGCCAGCTGCTGAACCTTTATGCAACGCCAACCTAGCTGCCAGTATGCACACACTCGACCACCTGGCGGGGGTGGCCAATCGTGCCGCCATCCACTACACCGGAGAGAGCCAACTGCGCGAGGTCCTGCAGAATCTCGGTAAAGATAAGTTCTCCCCTCAGTCCTTTGAGCAGGTGGGAACGCGCATCGCTAAAGTACTGGAGAAGAATCAGACATCGTGGGTATTATCCAGCATGGCCGCTCTGtactggagggtgaaaggtcAAGGCAAGAGAGCCATCGACTGCCTGCGACAGGCCCTCAACTACGCCCCCCATCACATGAAGGACGTGCCCCTCATCAGCCTGGCCAACATCTTCCAGAACGCTCGGCTATGGGAGGACGCTCTCACGGTCGCCCGTATGGCAGTAGAAATCGCCCCGCACTTTGTCGTCAACCACTTTACCCTCGCCAACGTCTATATAGCGATGGAGGAGTTTGAGAAAGCCATGCGCTGGTACGAGTCTACGTTGAAGCTGCAGCCAGAGTTCGCCCCTGCCAAAGATCGGCTGAGAACCATCCAGTGTTACCTGCTCACCAAGAGGGAACGCCGTCAGCCCTAAACCGCTCCACCAGTTTGATCACAAGGAGTAACCCACAATCATGCACACACTAGataaccaacacacacacacacacacacacacactcactcatctgAAGACCACCGATAAGAAGCACAAAATGAAAGTGTAAGAAACGTTTTATGTGGTTAAAGGTGAGGTGTCAAGATCCATATCCAGTAGAATCTGGGCTCTAACTCCCCCGAAGAATTAGGTTCGAAACGTCACAGAAGTACAACTGTAGATAATTCTGCCCCCCCGCCACTACTTACAGTATGTCAAATGCAGGACCTCTTGTTATCAAACAATCAAGACGTTGGGATTGTCAGACTCGGTTTTTTTCTAGGTTTGCTTGACTTGCAAAAATGGAATTGAACAAGATTTGAAAATCCCAGTGAATTCTTCAGCGACATTTTGATTTCAACCGCTGCTAATTGGAAGAAAACTCACATTGTCATTCGTTAAGACATTTTAGCATTTTGGTATGAGGAGGAGGCATCTAGGAGGTTCTCCAGGATAATAACATACTACAGCCTGGAGATGGCGCCATGTTTTAATGTAACCTGATtggacattttaaaagaaaaggatGTTATACAGTCTTATGCTGAGATGGTAAGGAATGTGCCTCGCAACTCCGAGGTTAAAGGAGTTTGAATTGAACGTTATATGCCCTCAATATTTCTGCTTCATAAAATGGATGGGAATTCTCAGtttttgcactttttatttttctttatcatTCCTATTTCTATGGGACCTACAAACTTTGATTTTGCTCCAAGgtaatttaaatacaaaagagAGAAACTGAAATACGCTATAACATTTGCTTCTTAACTTATGGAAATCATAAGGCAGAAAAAGGATTTGCCATTGACCatctataataaaaaaaaaaaaaagtggaatcTGTATTTAATGTACAGTATTAAAGGCAGTGTGTGGATTTCATTAGTTAA

Function

symbol description
ttc17 Involved in actin filament polymerization and cilium organization. Acts upstream of or within determination of heart left/right asymmetry. Predicted to be located in actin cytoskeleton; cytoplasm; and plasma membrane. Is expressed in female organism. Orthologous to human TTC17 (tetratricopeptide repeat domain 17).

NR:

description
tetratricopeptide repeat protein 17-like

GO: NA

KEGG:

id description
K24931 TTC17; tetratricopeptide repeat protein 17

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039794844.1 True 4643 mRNA 0.52 25 14017552 14048293
XM_039794845.1 False 4419 mRNA 0.52 24 14017552 14048294

Neighbor

gene id symbol gene type direction distance location
hsd17b12b hsd17b12,LOC103367509,LOC108234813,LOC106951467,LOC102212771 coding downstream 22237 13967714 ~ 13995315 (-)
LOC120555520 NA coding downstream 290082 13723593 ~ 13727470 (-)
chst1 chst1 coding downstream 610937 13402324 ~ 13406615 (-)
LOC120555522 NA coding downstream 723291 13285241 ~ 13294261 (-)
LOC120556590 NA coding downstream 728288 13289210 ~ 13289264 (-)
trpm5 trpm5 coding upstream 13742 14062036 ~ 14090460 (-)
kcnq1.1 kcnq1,LOC101467915,LOC102292488,LOC102797067,LOC100697082 coding upstream 52835 14101129 ~ 14153448 (-)
lingo1b LOC103361724 coding upstream 177483 14225777 ~ 14250332 (-)
muc15 NA coding upstream 590692 14638986 ~ 14654184 (-)
madd madd coding upstream 691898 14740192 ~ 14804767 (-)
G27277 NA non-coding downstream 12941 13997113 ~ 14004611 (-)
G27279 NA non-coding downstream 14805 14001850 ~ 14002747 (-)
G27230 NA non-coding downstream 263478 13753706 ~ 13754074 (-)
G27211 LOC104946114,LOC100698156 non-coding downstream 296956 13719198 ~ 13720596 (-)
G27210 NA non-coding downstream 305284 13708919 ~ 13712268 (-)
G27295 NA non-coding upstream 119263 14167557 ~ 14167758 (-)
G27297 NA non-coding upstream 121319 14169613 ~ 14169839 (-)
G27301 NA non-coding upstream 131833 14180127 ~ 14180348 (-)
G27309 NA non-coding upstream 176042 14224336 ~ 14225278 (-)
G27322 NA non-coding upstream 479548 14527842 ~ 14528127 (-)
G27075 LOC104939823,LOC100707594 other downstream 921786 13069996 ~ 13095766 (-)
G26924 LOC108281047 other downstream 1712728 12304539 ~ 12304824 (-)
G26891 NA other downstream 2055780 11960701 ~ 11961772 (-)
LOC120555651 NA other downstream 2348283 11643231 ~ 11669269 (-)
mtfmt mtfmt,LOC102776665,LOC102776373 other downstream 2507252 11476506 ~ 11510300 (-)
G27321 NA other upstream 421464 14469758 ~ 14470345 (-)
LOC120556476 NA other upstream 529733 14578027 ~ 14580011 (-)
G27420 NA other upstream 794419 14842713 ~ 14843905 (-)
cfap70 LOC103368539,LOC102222702,LOC102790175,LOC102296598,LOC102204478,LOC104922799 other upstream 1002368 15050662 ~ 15078830 (-)
LOC120556162 znf609 other upstream 2023275 16071569 ~ 16159882 (-)

Expression


Co-expression Network