Item | Value |
---|---|
gene id | fbn1 |
gene name | fbn1,LOC102779271 |
gene type | coding |
species | eurasian perch (Perca fluviatilis) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_053114.1 |
NCBI id | CM020911.1 |
chromosome length | 46923577 |
location | 17762238 ~ 17823496 (+) |
genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
symbol | description |
---|---|
fbn1 | Human ortholog(s) of this gene implicated in several diseases, including CREST syndrome; Weill-Marchesani syndrome; aortic disease (multiple); autosomal dominant isolated ectopia lentis 1; and bone disease (multiple). Orthologous to human FBN1 (fibrillin 1). |
description |
---|
PREDICTED: fibrillin-1 |
id | name | namespace |
---|---|---|
GO:0006030 | chitin metabolic process | biological_process |
GO:0005509 | calcium ion binding | molecular_function |
GO:0005201 | extracellular matrix structural constituent | molecular_function |
GO:0008061 | chitin binding | molecular_function |
id | description |
---|---|
K06825 | FBN1; fibrillin 1 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_039794856.1 | True | 10323 | mRNA | 0.51 | 67 | 17762238 | 17823496 |
XM_039794857.1 | False | 8982 | mRNA | 0.51 | 54 | 17762245 | 17823496 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
secisbp2l | secisbp2l | coding | upstream | 41981 | 17702303 ~ 17720257 (+) |
cops2 | cops2 | coding | upstream | 60113 | 17695108 ~ 17702125 (+) |
LOC120555872 | LOC104951150,LOC103379093 | coding | upstream | 137706 | 17609461 ~ 17624532 (+) |
slc30a4 | slc30a4 | coding | upstream | 167077 | 17579315 ~ 17595161 (+) |
mibp2 | LOC100693649,LOC103353206,LOC102204817 | coding | upstream | 196031 | 17563731 ~ 17566207 (+) |
myef2 | myef2 | coding | downstream | 31342 | 17854838 ~ 17870516 (+) |
LOC120555992 | NA | coding | downstream | 62745 | 17886241 ~ 17888724 (+) |
dmxl2 | dmxl2 | coding | downstream | 362405 | 18185901 ~ 18236296 (+) |
LOC120555996 | LOC104920192 | coding | downstream | 425279 | 18248775 ~ 18252359 (+) |
tnfaip8l3 | tnfaip8l3 | coding | downstream | 450192 | 18273688 ~ 18295514 (+) |
G27895 | NA | non-coding | upstream | 266465 | 17494748 ~ 17495773 (+) |
G27884 | NA | non-coding | upstream | 296594 | 17381379 ~ 17465644 (+) |
G27879 | NA | non-coding | upstream | 448148 | 17313888 ~ 17314090 (+) |
G27877 | NA | non-coding | upstream | 467287 | 17292715 ~ 17294951 (+) |
G27840 | NA | non-coding | upstream | 589767 | 17172255 ~ 17172471 (+) |
G27977 | NA | non-coding | downstream | 2368 | 17825864 ~ 17826910 (+) |
G28066 | slc24a5,LOC102781271 | non-coding | downstream | 48250 | 17871746 ~ 17876173 (+) |
G28065 | NA | non-coding | downstream | 65265 | 17888761 ~ 17889217 (+) |
G28083 | NA | non-coding | downstream | 95404 | 17918900 ~ 17919196 (+) |
LOC120555993 | NA | non-coding | downstream | 181332 | 18004828 ~ 18181201 (+) |
LOC120555788 | NA | other | upstream | 18790 | 17724545 ~ 17743448 (+) |
LOC120556001 | rbpms2,LOC107381790,LOC103368877,LOC104957780 | other | upstream | 2275787 | 15475147 ~ 15486451 (+) |
LOC120556433 | psma4,psa4,LOC106562664 | other | upstream | 2315746 | 15441455 ~ 15446492 (+) |
LOC120556271 | tmem138,LOC104922799,LOC102296598,LOC102204478,LOC104956289,LOC103368539,LOC102790175,LOC102222702 | other | upstream | 2708616 | 15047877 ~ 15053622 (+) |
kcna4 | kcna4 | other | upstream | 2797176 | 14889390 ~ 14965062 (+) |
LOC120556478 | LOC103360749,LOC104942123,LOC102301404 | other | downstream | 738377 | 18561873 ~ 18575942 (+) |
LOC120555697 | NA | other | downstream | 1250812 | 19074308 ~ 19087064 (+) |
G28581 | NA | other | downstream | 1663750 | 19487246 ~ 19487533 (+) |
ercc3 | ercc3 | other | downstream | 1688860 | 19512356 ~ 19520218 (+) |
LOC120555792 | pcdh9,LOC102784100 | other | downstream | 1948623 | 19772119 ~ 19993954 (+) |