LOC120555834


Basic Information

Item Value
gene id LOC120555834
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 19113966 ~ 19123540 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039794964.1
GAATTGTAGAGATGGTTACAGGAGAACGCATTAGAAAAAAATGAGAAGAAGACTGATTTCATCAGCATCATGACTGAAGTGAACAAGCAATGTTTGTCTCTTTACATTCTGtgttcttttatttttcctATTTTCATGGAGGGATGctgtggaaaacaaaataaacaaacagTTGGGAACCAGCGGGGAACTTTTCCCCAGCACTACAGAGCTGTAGAGGGGGAAGACTTTATGATACCGTGTGAAACTGTGAACCAGCACATGGTGTCATGTTCCATGACAGGAGAAGGAAATGAAGGCCTATCCTTTGTCTGTGGGAGAGTCTTCCGAGCTGAAGCAAAACATTCTGGAAAGTACACATGCAGTGGCAGCAATATGTTTTTCCATCTGCAGGTGGTGAATAGAAGTCTGGGATGCTTACAGTCTAACAAGAGCCATAAGTCAGTATTGCTGACCGTGGCTCAAGGTGGGGAGATCTCCTGCCCAGGTAGCAACTGTAGTAACAACCCAGAGATCATTTGGTACAAGAATAACAAAAATGTGTCCCTACGCTCCTGTCAGACGCCTGGGCGATTACATTTCTGTGAAGTCAGAAAAGAGGATACTGATGTATATTTCTGTGATAGACAAATAATTGAGCAAGGAGTCAATTGGACCTTCAGGAGGGCTGTTCACGTCACAGTCATCGCTAAATTAGATGAACCTCCCAGCATTATTTATCCCTATGGCAACATAAAAGAGGAAGTGGAGCTTGGTCGGTCTCACACTCTGATGTGTAaggcacgttttttttttgagatAGACCGTTTGCCCGAGGTGAGGTGGTACAGGAACTACGGTGGCAAGATGGAGAATATGACTCTACTACCCATGGAATCCAAGGACATGGGCCTATTTGTGCTCGAGGTTATACAAAGAGCCGTCATAGAAGAGGTGACTCCACAACTCTTGAACCAGTATCACACGTATACCTGCATCGCCAATAATACTCATGGAAACACCAATGCCACCATCAAGCTCATCGAGAAAATGAAAGTAAAATGGCCGTCACTGGTTGGGTATCCCGTTGTGTCTTTGCTGCTGGTAGCTGGGCTGGGAATGGTTTTGCATGTGAAATGGCTGGAAATACAGCTTATCTACAGATCCCACTTCCAATGTGGAAAATATGATGGAGATAAGAAAGAGTTTGATGTGCTTCTGTCGTATGTGTGGAGCCCTCCAACAGCTGAGGTTGAGGGCGTTTTGACCATTTCCACCCAGAAAGGACCTGACACAGATGAGGAAGCATGTTTGTCCAGCATGGACCCGCTGAACACTGAGGAGGGTACCTCAACCCAGAGACCACTAGAAGTGCTGCTACCCCATGTGTTAGAGGACCGGTGGGCATATCGCCTCTGTCTTCTGGAGAGGGACGTGCTTCCTGGAGGAGCATATGCAAATGATGTGGTCCTTGCAATGCAGAGAAGCCGAATGCTTATCTGTCTCCTGTCAGCTGACTACCTCTCCAACAGCAATGCTGTGTTTGTACTGGAATCGGGAATCCAGGCTTTGCTGCAAAACTCTTCCCTCAAAGTCCTGCTAATATGGGTCAGCAGAACGTCAGCATCCCTCATCCAGCCGGACCCCCCGCTGCCCACAGTGGTCCAAAGGGCCTTGAAGGTGCTACCCAGTCTGGATTGGACCTCAGGCGAACCCGCCAGAGCCACCAACAACTTCTGGAGGTCTTTGAGGAAGGCCATGCCCGATCAGAGAGTGGCGCTGGTTTCACTCATGCAGGACCAATGATTAGACTGTTCGGTTTGCAAGCAAGGGCAACACATGAACAACAGCGTCAAGGTAATTTTCATATGATGGGGAAAGCGTGTCACCCTTTGTGCCATGCTCAGAGCACAACGGTGTGTACTCTGGTCTTTAATTTCCATCTGTACCAAAGATAAACTGTTTCGGTTAAACAGTGCAAAATAATTTACAGGATATAACAGTTAAAGGATTTGTTTTAGTCCATTGATAAAATATGTCTAAACAATGGATGCTTCGTAACAATTAAACCTAATTACCTTTTATATGCCTGTATGTactatgtaatgtaatatatatatcagCTTAAGTAAATCATGTATtgtcacagcagacatgtctgcaataaacatttgacacaataTA
>XM_039794965.1
GAATTGTAGAGATGGTTACAGGAGAACGCATTAGAAAAAAATGAGAAGAAGACTGATTTCATCAGCATCATGACTGAAGTGAACAAGCAATGTTTGTCTCTTTACATTCTGtgttcttttatttttcctATTTTCATGGAGGGATGctgtggaaaacaaaataaacaaacagTTGGGAACCAGCGGGGAACTTTTCCCCAGCACTACAGAGCTGTAGAGGGGGAAGACTTTATGATACCGTGTGAAACTGTGAACCAGCACATGGTGTCATGTTCCATGACAGGAGAAGGAAATGAAGGCCTATCCTTTGTCTGTGGGAGAGTCTTCCGAGCTGAAGCAAAACATTCTGGAAAGTACACATGCAGTGGCAGCAATATGTTTTTCCATCTGCAGGTGGTGAATAGAAGTCTGGGATGCTTACAGTCTAACAAGAGCCATAAGTCAGTATTGCTGACCGTGGCTCAAGGTGGGGAGATCTCCTGCCCAGGTAGCAACTGTAGTAACAACCCAGAGATCATTTGGTACAAGACGCCTGGGCGATTACATTTCTGTGAAGTCAGAAAAGAGGATACTGATGTATATTTCTGTGATAGACAAATAATTGAGCAAGGAGTCAATTGGACCTTCAGGAGGGCTGTTCACGTCACAGTCATCGCTAAATTAGATGAACCTCCCAGCATTATTTATCCCTATGGCAACATAAAAGAGGAAGTGGAGCTTGGTCGGTCTCACACTCTGATGTGTAaggcacgttttttttttgagatAGACCGTTTGCCCGAGGTGAGGTGGTACAGGAACTACGGTGGCAAGATGGAGAATATGACTCTACTACCCATGGAATCCAAGGACATGGGCCTATTTGTGCTCGAGGTTATACAAAGAGCCGTCATAGAAGAGGTGACTCCACAACTCTTGAACCAGTATCACACGTATACCTGCATCGCCAATAATACTCATGGAAACACCAATGCCACCATCAAGCTCATCGAGAAAATGAAAGTAAAATGGCCGTCACTGGTTGGGTATCCCGTTGTGTCTTTGCTGCTGGTAGCTGGGCTGGGAATGGTTTTGCATGTGAAATGGCTGGAAATACAGCTTATCTACAGATCCCACTTCCAATGTGGAAAATATGATGGAGATAAGAAAGAGTTTGATGTGCTTCTGTCGTATGTGTGGAGCCCTCCAACAGCTGAGGTTGAGGGCGTTTTGACCATTTCCACCCAGAAAGGACCTGACACAGATGAGGAAGCATGTTTGTCCAGCATGGACCCGCTGAACACTGAGGAGGGTACCTCAACCCAGAGACCACTAGAAGTGCTGCTACCCCATGTGTTAGAGGACCGGTGGGCATATCGCCTCTGTCTTCTGGAGAGGGACGTGCTTCCTGGAGGAGCATATGCAAATGATGTGGTCCTTGCAATGCAGAGAAGCCGAATGCTTATCTGTCTCCTGTCAGCTGACTACCTCTCCAACAGCAATGCTGTGTTTGTACTGGAATCGGGAATCCAGGCTTTGCTGCAAAACTCTTCCCTCAAAGTCCTGCTAATATGGGTCAGCAGAACGTCAGCATCCCTCATCCAGCCGGACCCCCCGCTGCCCACAGTGGTCCAAAGGGCCTTGAAGGTGCTACCCAGTCTGGATTGGACCTCAGGCGAACCCGCCAGAGCCACCAACAACTTCTGGAGGTCTTTGAGGAAGGCCATGCCCGATCAGAGAGTGGCGCTGGTTTCACTCATGCAGGACCAATGATTAGACTGTTCGGTTTGCAAGCAAGGGCAACACATGAACAACAGCGTCAAGGTAATTTTCATATGATGGGGAAAGCGTGTCACCCTTTGTGCCATGCTCAGAGCACAACGGTGTGTACTCTGGTCTTTAATTTCCATCTGTACCAAAGATAAACTGTTTCGGTTAAACAGTGCAAAATAATTTACAGGATATAACAGTTAAAGGATTTGTTTTAGTCCATTGATAAAATATGTCTAAACAATGGATGCTTCGTAACAATTAAACCTAATTACCTTTTATATGCCTGTATGTactatgtaatgtaatatatatatcagCTTAAGTAAATCATGTATtgtcacagcagacatgtctgcaataaacatttgacacaataTA
>XM_039794966.1
GAATTGTAGAGATGGTTACAGGAGAACGCATTAGAAAAAAATGAGAAGAAGACTGATTTCATCAGCATCATGACTGAAGTGAACAAGCAATGTTTGTCTCTTTACATTCTGtgttcttttatttttcctATTTTCATGGAGGGATGctgtggaaaacaaaataaacaaacagTTGGGAACCAGCGGGGAACTTTTCCCCAGCACTACAGAGCTGTAGAGGGGGAAGACTTTATGATACCGTGTGAAACTGTGAACCAGCACATGGTGTCATGTTCCATGACAGGAGAAGGAAATGAAGGCCTATCCTTTGTCTGTGGGAGAGTCTTCCGAGCTGAAGCAAAACATTCTGGAAAGTACACATGCAGTGGCAGCAATATGTTTTTCCATCTGCAGGTGGTGAATAGAAGTCTGGGATGCTTACAGTCTAACAAGAGCCATAAGTCAGTATTGCTGACCGTGGCTCAAGGTGGGGAGATCTCCTGCCCAGGTAGCAACTGTAGTAACAACCCAGAGATCATTTGGTACAAGAATAACAAAAATGTGTCCCTACGCTCCTGTCAGACGCCTGGGCGATTACATTTCTGTGAAGTCAGAAAAGAGGATACTGATGTATATTTCTGTGATAGACAAATAATTGAGCAAGGAGTCAATTGGACCTTCAGGAGGGCTGTTCACGTCACAGTCATCGCTAAATTAGATGAACCTCCCAGCATTATTTATCCCTATGGCAACATAAAAGAGGAAGTGGAGCTTGACCGTTTGCCCGAGGTGAGGTGGTACAGGAACTACGGTGGCAAGATGGAGAATATGACTCTACTACCCATGGAATCCAAGGACATGGGCCTATTTGTGCTCGAGGTTATACAAAGAGCCGTCATAGAAGAGGTGACTCCACAACTCTTGAACCAGTATCACACGTATACCTGCATCGCCAATAATACTCATGGAAACACCAATGCCACCATCAAGCTCATCGAGAAAATGAAAGTAAAATGGCCGTCACTGGTTGGGTATCCCGTTGTGTCTTTGCTGCTGGTAGCTGGGCTGGGAATGGTTTTGCATGTGAAATGGCTGGAAATACAGCTTATCTACAGATCCCACTTCCAATGTGGAAAATATGATGGAGATAAGAAAGAGTTTGATGTGCTTCTGTCGTATGTGTGGAGCCCTCCAACAGCTGAGGTTGAGGGCGTTTTGACCATTTCCACCCAGAAAGGACCTGACACAGATGAGGAAGCATGTTTGTCCAGCATGGACCCGCTGAACACTGAGGAGGGTACCTCAACCCAGAGACCACTAGAAGTGCTGCTACCCCATGTGTTAGAGGACCGGTGGGCATATCGCCTCTGTCTTCTGGAGAGGGACGTGCTTCCTGGAGGAGCATATGCAAATGATGTGGTCCTTGCAATGCAGAGAAGCCGAATGCTTATCTGTCTCCTGTCAGCTGACTACCTCTCCAACAGCAATGCTGTGTTTGTACTGGAATCGGGAATCCAGGCTTTGCTGCAAAACTCTTCCCTCAAAGTCCTGCTAATATGGGTCAGCAGAACGTCAGCATCCCTCATCCAGCCGGACCCCCCGCTGCCCACAGTGGTCCAAAGGGCCTTGAAGGTGCTACCCAGTCTGGATTGGACCTCAGGCGAACCCGCCAGAGCCACCAACAACTTCTGGAGGTCTTTGAGGAAGGCCATGCCCGATCAGAGAGTGGCGCTGGTTTCACTCATGCAGGACCAATGATTAGACTGTTCGGTTTGCAAGCAAGGGCAACACATGAACAACAGCGTCAAGGTAATTTTCATATGATGGGGAAAGCGTGTCACCCTTTGTGCCATGCTCAGAGCACAACGGTGTGTACTCTGGTCTTTAATTTCCATCTGTACCAAAGATAAACTGTTTCGGTTAAACAGTGCAAAATAATTTACAGGATATAACAGTTAAAGGATTTGTTTTAGTCCATTGATAAAATATGTCTAAACAATGGATGCTTCGTAACAATTAAACCTAATTACCTTTTATATGCCTGTATGTactatgtaatgtaatatatatatcagCTTAAGTAAATCATGTATtgtcacagcagacatgtctgcaataaacatttgacacaataTA
>XM_039794967.1
GAAGGCCTATCCTTTGTCTGTGGGAGAGTCTTCCGAGCTGAAGCAAAACATTCTGGAAAGTACACATGCAGGTGGTGAATAGAAGTCTGGGATGCTTACAGTCTAACAAGAGCCATAAGTCAGTATTGCTGACCGTGGCTCAAGGTGGGGAGATCTCCTGCCCAGGTAGCAACTGTAGTAACAACCCAGAGATCATTTGGTACAAGAATAACAAAAATGTGTCCCTACGCTCCTGTCAGACGCCTGGGCGATTACATTTCTGTGAAGTCAGAAAAGAGGATACTGATGTATATTTCTGTGATAGACAAATAATTGAGCAAGGAGTCAATTGGACCTTCAGGAGGGCTGTTCACGTCACAGTCATCGCTAAATTAGATGAACCTCCCAGCATTATTTATCCCTATGGCAACATAAAAGAGGAAGTGGAGCTTGGTCGGTCTCACACTCTGATGTGTAaggcacgttttttttttgagatAGACCGTTTGCCCGAGGTGAGGTGGTACAGGAACTACGGTGGCAAGATGGAGAATATGACTCTACTACCCATGGAATCCAAGGACATGGGCCTATTTGTGCTCGAGGTTATACAAAGAGCCGTCATAGAAGAGGTGACTCCACAACTCTTGAACCAGTATCACACGTATACCTGCATCGCCAATAATACTCATGGAAACACCAATGCCACCATCAAGCTCATCGAGAAAATGAAAGTAAAATGGCCGTCACTGGTTGGGTATCCCGTTGTGTCTTTGCTGCTGGTAGCTGGGCTGGGAATGGTTTTGCATGTGAAATGGCTGGAAATACAGCTTATCTACAGATCCCACTTCCAATGTGGAAAATATGATGGAGATAAGAAAGAGTTTGATGTGCTTCTGTCGTATGTGTGGAGCCCTCCAACAGCTGAGGTTGAGGGCGTTTTGACCATTTCCACCCAGAAAGGACCTGACACAGATGAGGAAGCATGTTTGTCCAGCATGGACCCGCTGAACACTGAGGAGGGTACCTCAACCCAGAGACCACTAGAAGTGCTGCTACCCCATGTGTTAGAGGACCGGTGGGCATATCGCCTCTGTCTTCTGGAGAGGGACGTGCTTCCTGGAGGAGCATATGCAAATGATGTGGTCCTTGCAATGCAGAGAAGCCGAATGCTTATCTGTCTCCTGTCAGCTGACTACCTCTCCAACAGCAATGCTGTGTTTGTACTGGAATCGGGAATCCAGGCTTTGCTGCAAAACTCTTCCCTCAAAGTCCTGCTAATATGGGTCAGCAGAACGTCAGCATCCCTCATCCAGCCGGACCCCCCGCTGCCCACAGTGGTCCAAAGGGCCTTGAAGGTGCTACCCAGTCTGGATTGGACCTCAGGCGAACCCGCCAGAGCCACCAACAACTTCTGGAGGTCTTTGAGGAAGGCCATGCCCGATCAGAGAGTGGCGCTGGTTTCACTCATGCAGGACCAATGATTAGACTGTTCGGTTTGCAAGCAAGGGCAACACATGAACAACAGCGTCAAGGTAATTTTCATATGATGGGGAAAGCGTGTCACCCTTTGTGCCATGCTCAGAGCACAACGGTGTGTACTCTGGTCTTTAATTTCCATCTGTACCAAAGATAAACTGTTTCGGTTAAACAGTGCAAAATAATTTACAGGATATAACAGTTAAAGGATTTGTTTTAGTCCATTGATAAAATATGTCTAAACAATGGATGCTTCGTAACAATTAAACCTAATTACCTTTTATATGCCTGTATGTactatgtaatgtaatatatatatcagCTTAAGTAAATCATGTATtgtcacagcagacatgtctgcaataaacatttgacacaataTA

Function

GO: NA

KEGG:

id description
K05174 IL18RAP, ACPL, CD218b; interleukin 18 receptor accessory protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039794964.1 True 2163 mRNA 0.45 12 19113966 19123540
XM_039794965.1 False 2130 mRNA 0.45 12 19113966 19123540
XM_039794966.1 False 2115 mRNA 0.45 12 19113966 19123540
XM_039794967.1 False 1841 mRNA 0.46 11 19114414 19123540

Neighbor

gene id symbol gene type direction distance location
LOC120555696 NA coding upstream 4903 19104266 ~ 19109063 (+)
tmem39a tmem39a coding upstream 89994 19010477 ~ 19023972 (+)
LOC120556409 LOC104967794 coding upstream 105580 18999528 ~ 19008386 (+)
LOC120555986 LOC103365180,LOC104967792 coding upstream 118688 18970586 ~ 18995278 (+)
LOC120555985 NA coding upstream 144488 18958969 ~ 18969478 (+)
stk16 stk16 coding downstream 3340 19126880 ~ 19132812 (+)
mnx2b LOC103365191,LOC104967070 coding downstream 41054 19164594 ~ 19168813 (+)
atic atic,LOC103365192,LOC102792413 coding downstream 50652 19174192 ~ 19181908 (+)
rbms1a LOC104918252,LOC103359468,LOC103143540 coding downstream 113705 19237245 ~ 19256129 (+)
itgb6 itgb6 coding downstream 137751 19261291 ~ 19275805 (+)
G28409 NA non-coding upstream 2279 19109918 ~ 19111687 (+)
G28408 NA non-coding upstream 10310 19103360 ~ 19103656 (+)
G28407 NA non-coding upstream 10891 19102717 ~ 19103075 (+)
G28406 NA non-coding upstream 12177 19101053 ~ 19101789 (+)
G28405 NA non-coding upstream 13327 19100419 ~ 19100639 (+)
G28465 NA non-coding downstream 33057 19156597 ~ 19156813 (+)
G28473 LOC103359471 non-coding downstream 66578 19190118 ~ 19191162 (+)
G28474 LOC103359471 non-coding downstream 68232 19191772 ~ 19193265 (+)
G28479 LOC103359471 non-coding downstream 73206 19196746 ~ 19198227 (+)
G28492 psmd14,LOC107563735 non-coding downstream 106415 19229955 ~ 19230628 (+)
LOC120555697 NA other upstream 26902 19074308 ~ 19087064 (+)
LOC120556478 LOC103360749,LOC104942123,LOC102301404 other upstream 538024 18561873 ~ 18575942 (+)
LOC120555788 NA other upstream 1370518 17724545 ~ 17743448 (+)
LOC120556001 rbpms2,LOC107381790,LOC103368877,LOC104957780 other upstream 3627515 15475147 ~ 15486451 (+)
LOC120556433 psma4,psa4,LOC106562664 other upstream 3667474 15441455 ~ 15446492 (+)
G28581 NA other downstream 363706 19487246 ~ 19487533 (+)
ercc3 ercc3 other downstream 388816 19512356 ~ 19520218 (+)
LOC120555792 pcdh9,LOC102784100 other downstream 648579 19772119 ~ 19993954 (+)
G28770 NA other downstream 1587564 20711104 ~ 20761147 (+)
G28826 NA other downstream 2272673 21396213 ~ 21403450 (+)

Expression


Co-expression Network