lmnl3 (LOC104943683)


Basic Information

Item Value
gene id lmnl3
gene name LOC104943683
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 7330708 ~ 7344756 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039794988.1
CGGAGCTCTTGACAGTGCGTCTACTCGTCAAATGTGATTAATTTCAGCTGTGGACACCTTTAATGCAGGAAAAACGGGCCGCTTGACAAGTACGGAGGACCACAGCCGGGATTTCCATGTGCTGCGTTGATTCATGAACTTTGCGGAGTGGTTCAATGCGACTTTTATCCTTTCTAGAGACCACCGCATCCGTTGCTTGTTTTAACGTTAACGTCACGTCACGTTACTTTACTGTGGCCCCTAGTTTTGtagtctgtgtctatgtcttaGTCTGACGGCACTATAACTATCTGAACTAGTTGTGGACCCTGCCTACAGAAGTGTCTAGCTagcccaccaccaccaccatcatggCCTCTGCCACCTCGACCCCCGCTGCCGCCGCCGCCTCCAGCGGCCGCTCCAGCCGCTCCGTGAGCCGCTCCGCCGGCCGCAGCGTAGCCTCCCCCGGCCTGGCCACATCCAGCACCAGCCCGACCCGCCTGTCCCGCCTCCAGGAGAAAGATAACCTCCGGCACCTCAACGACCGCCTCGCCAACTACATTCAGCGGGTCCAAGAGTTGGAGAGTGAACGGTCTTCCATATTGTTTCAGCTGGAAGAGAAGGATGACTCGAAAAGCCGGGAGATGGGCAACGTGCGGCGGCTGTACGAGGAGGAGTTGGCCGATGTCAGGAAGTCCCTGGACGGCCTGGCCGGAGAGAGGGCCCGCTTGCAGATCGACTGTGGAAATCTCTGCGAGGAGAACAGGAAACTTCAAGCCAGGAACCAGAAGAAGGAGAGCGAGTTGGCGAACGCGCTGGCCCAGTGGAGGAAAGTGGAGGCGATGCTGAGCTCCAAGGATGCGGAGTACACCAAGCTGTTGTCTGAGAACCGGAGACTTGCTGAAGAAGTGGCCGACCTGCAGGAGCATCTGGAATATGCAGAGGGCGTACTGAGCGATACAAAGAACCAGCTGAACTGTGAGATCCTGAGGAAGGTGGACATGGAGAACCAGGTGCAAACGCTCAAAGAGCAGCTGGAACTCCAGAGGAACATCAGTGAGCAGgaggTCTTGGAGATCCGAAGCCGACAGGACAGTCGTCTGGTGGAGGTGGACTCGGTACAGCGGAGAGAGTTTGAGAGTAAACTGTCGGAGACGATTCAGCAACTCCGCCACGACCATgagtctcagctgcagcagtaCAGAGAGGAGCTCGACAGGACGTTCAGTTCAAAGTTGCAGAATGCCCAGCAGGCTGCATTGGAGAAGAACCAGGTTGCTTCAGCCACCAGAGACGAACTGGAAACCACCAAGCTCCGAGTGGAGAGCCTCAGCTCCCAGCTCCAGCAGTACCAGAAAGATAAAGCGGCGCTGGAGGGCCACTGCCAGGATCTGGAGCGGACACTGGACCGGGAACGGGAGGTCTGGCAGCACCGGCTGGATCAGAAGGAGCAGGAGCAGCTGAGCATGAGGAGCCAGATGTTTGCCCAGCTGGAAGACTACGAAAACCTGCTGGACGTCAAGCTGGCCCTAGACATGGAGATCAACGCCTACAGGAAGATGCTGGAGGTGGAGGAGCAGAGGTTGCATCTGTCACCCAGCCCCTCGCAGCACGCAGCCATACCTCGGACACATGAACACAGCAGCCGCAAGCTCCGAGGGAAGAAACGCAAGCACGAGGGAGCCTCTGGCAGCTCGCCAGCCTACAAGATGTCCAGTCGCTCCACGGAGAGCGGAGCTGTGAGCGTGGCAGAGGTCGACTCCGACGGAAAATATGTCCGACTGAAGAACAACTCTGAGACGGAGCAGCCACTGGGTGGTTGGGTGGTCCGGAGGTTGTACCCCGGCTCTGGGGACCTCTCCTTCTACATCCCCCCCTCCTACATCCTGGCTGCTGGGCAGACTCTCACAatctggGCAGCAGGTGCCGAGGCGGAGGCTGATCCTGGGGACCTGATTCTGCAGGGCCACACGAGCTGGGGCCCCGTCACTGAGATCAGGGTGATTCTTCTGAACCCCAACCAAGAGgaaGTAGCAGAGCGCAGGGTGTGTATGCAGCACAGGGGTGATGAGGACACTGAATTGGAGTTTGATGAGGAATTTGTGGCGGGCAGTGACATCCAGCACTTTCGGAGACAGgatCTATCTGGATCTAAGGAGGCGAGCTGTGCGGTCATGTGATTTCTGCTGTGCGTCTAGGAAACATGGAGCGCCTCTGGAGGACAAAACATCTGCTGCTGTCTGGTTCCGCTGTTGTCTCGTACAACAAACTGGACTCTGACAAACTGCAGTACATGCATACAGGACATTGAGCTGTTAGTGTGACTGTGACCAGCTTCGAGGCCTTAGAGCAACAGTACCCACCTCAGTTTTCCTCACGTTTCATCGCTCTAACTGCACAAGATATGAACTTTGCCttgatttaatttcattttaaatgtgtgtgtctcgAATAAAACTTGTTTAGCATAATagttataaataaattaataaagttataaatGCAGTTTGGTCA
>XM_039794989.1
GCGGAGCTCTTGACAGTGCGTCTACTCGTCAAATGTGATTAATTTCAGCTGTGGACACCTTTAATGCAGGAAAAACGGGCCGCTTGACAAGTACGGAGGACCACAGCCGGGATTTCCATGTGCTGCGTTGATTCATGAACTTTGCGGAGTGGTTCAATGCGACTTTTATCCTTTCTAGAGACCACCGCATCCGTTGCTTGTTTTAACGTTAACGTCACGTCACGTTACTTTACTGTGGCCCCTAGTTTTGtagtctgtgtctatgtcttaGTCTGACGGCACTATAACTATCTGAACTAGTTGTGGACCCTGCCTACAGAAGTGTCTAGCTagcccaccaccaccaccatcatggCCTCTGCCACCTCGACCCCCGCTGCCGCCGCCGCCTCCAGCGGCCGCTCCAGCCGCTCCGTGAGCCGCTCCGCCGGCCGCAGCGTAGCCTCCCCCGGCCTGGCCACATCCAGCACCAGCCCGACCCGCCTGTCCCGCCTCCAGGAGAAAGATAACCTCCGGCACCTCAACGACCGCCTCGCCAACTACATTCAGCGGGTCCAAGAGTTGGAGAGTGAACGGTCTTCCATATTGTTTCAGCTGGAAGAGAAGGATGACTCGAAAAGCCGGGAGATGGGCAACGTGCGGCGGCTGTACGAGGAGGAGTTGGCCGATGTCAGGAAGTCCCTGGACGGCCTGGCCGGAGAGAGGGCCCGCTTGCAGATCGACTGTGGAAATCTCTGCGAGGAGAACAGGAAACTTCAAGCCAGGAACCAGAAGAAGGAGAGCGAGTTGGCGAACGCGCTGGCCCAGTGGAGGAAAGTGGAGGCGATGCTGAGCTCCAAGGATGCGGAGTACACCAAGCTGTTGTCTGAGAACCGGAGACTTGCTGAAGAAGTGGCCGACCTGCAGGAGCATCTGGAATATGCAGAGGGCGTACTGAGCGATACAAAGAACCAGCTGAACTGTGAGATCCTGAGGAAGGTGGACATGGAGAACCAGGTGCAAACGCTCAAAGAGCAGCTGGAACTCCAGAGGAACATCAGTGAGCAGgaggTCTTGGAGATCCGAAGCCGACAGGACAGTCGTCTGGTGGAGGTGGACTCGGTACAGCGGAGAGAGTTTGAGAGTAAACTGTCGGAGACGATTCAGCAACTCCGCCACGACCATgagtctcagctgcagcagtaCAGAGAGGAGCTCGACAGGACGTTCAGTTCAAAGTTGCAGAATGCCCAGCAGGCTGCATTGGAGAAGAACCAGGTTGCTTCAGCCACCAGAGACGAACTGGAAACCACCAAGCTCCGAGTGGAGAGCCTCAGCTCCCAGCTCCAGCAGTACCAGAAAGATAAAGCGGCGCTGGAGGGCCACTGCCAGGATCTGGAGCGGACACTGGACCGGGAACGGGAGGTCTGGCAGCACCGGCTGGATCAGAAGGAGCAGGAGCAGCTGAGCATGAGGAGCCAGATGTTTGCCCAGCTGGAAGACTACGAAAACCTGCTGGACGTCAAGCTGGCCCTAGACATGGAGATCAACGCCTACAGGAAGATGCTGGAGGTGGAGGAGCAGAGGTTGCATCTGTCACCCAGCCCCTCGCAGCACGCAGCCATACCTCGGACACATGAACACAGCAGCCGCAAGCTCCGAGGGAAGAAACGCAAGCACGAGGGAGCCTCTGGCAGCTCGCCAGCCTACAAGATGTCCAGTCGCTCCACGGAGAGCGGAGCTGTGAGCGTGGCAGAGGTCGACTCCGACGGAAAATATGTCCGACTGAAGAACAACTCTGAGACGGAGCAGCCACTGGGTGGTTGGGTGGTCCGGAGGTTGTACCCCGGCTCTGGGGACCTCTCCTTCTACATCCCCCCCTCCTACATCCTGGCTGCTGGGCAGACTCTCACAatctggGCAGCAGGTGCCGAGGCGGAGGCTGATCCTGGGGACCTGATTCTGCAGGGCCACACGAGCTGGGGCCCCGTCACTGAGATCAGGGTGATTCTTCTGAACCCCAACCAAGAGgaaGTAGCAGAGCGCAGGGTGTGTATGCAGCACAGGGGTGATGAGGACACTGAATTGGAGTTTGATGAGGAATTTGTGGCGGGCAGTGACATCCAGCACTTTCGGAGACAGccaaagaggaagaagaagaagtgctGTTCTGTCTCTTGAGTGCAGACAGACAGCGTGCTGTACAGTAGgatCTATCTGGATCTAAGGAGGCGAGCTGTGCGGTCATGTGATTTCTGCTGTGCGTCTAGGAAACATGGAGCGCCTCTGGAGGACAAAACATCTGCTGCTGTCTGGTTCCGCTGTTGTCTCGTACAACAAACTGGACTCTGACAAACTGCAGTACATGCATACAGGACATTGAGCTGTTAGTGTGACTGTGACCAGCTTCGAGGCCTTAGAGCAACAGTACCCACCTCAGTTTTCCTCACGTTTCATCGCTCTAACTGCACAAGATATGAACTTTGCCttgatttaatttcattttaaatgtgtgtgtctcgAATAAAACTTGTTTAGCATAATagttataaataaattaataaagttataaatGCAGTTTGGTCA
>XR_005638761.1
GCGGAGCTCTTGACAGTGCGTCTACTCGTCAAATGTGATTAATTTCAGCTGTGGACACCTTTAATGCAGGAAAAACGGGCCGCTTGACAAGTACGGAGGACCACAGCCGGGATTTCCATGTGCTGCGTTGATTCATGAACTTTGCGGAGTGGTTCAATGCGACTTTTATCCTTTCTAGAGACCACCGCATCCGTTGCTTGTTTTAACGTTAACGTCACGTCACGTTACTTTACTGTGGCCCCTAGTTTTGtagtctgtgtctatgtcttaGTCTGACGGCACTATAACTATCTGAACTAGTTGTGGACCCTGCCTACAGAAGTGTCTAGCTagcccaccaccaccaccatcatggCCTCTGCCACCTCGACCCCCGCTGCCGCCGCCGCCTCCAGCGGCCGCTCCAGCCGCTCCGTGAGCCGCTCCGCCGGCCGCAGCGTAGCCTCCCCCGGCCTGGCCACATCCAGCACCAGCCCGACCCGCCTGTCCCGCCTCCAGGAGAAAGATAACCTCCGGCACCTCAACGACCGCCTCGCCAACTACATTCAGCGGGTCCAAGAGTTGGAGAGTGAACGGTCTTCCATATTGTTTCAGCTGGAAGAGAAGGATGACTCGAAAAGCCGGGAGATGGGCAACGTGCGGCGGCTGTACGAGGAGGAGTTGGCCGATGTCAGGAAGTCCCTGGACGGCCTGGCCGGAGAGAGGGCCCGCTTGCAGATCGACTGTGGAAATCTCTGCGAGGAGAACAGGAAACTTCAAGCCAGGAACCAGAAGAAGGAGAGCGAGTTGGCGAACGCGCTGGCCCAGTGGAGGAAAGTGGAGGCGATGCTGAGCTCCAAGGATGCGGAGTACACCAAGCTGTTGTCTGAGAACCGGAGACTTGCTGAAGAAGTGGCCGACCTGCAGGAGCATCTGGAATATGCAGAGGGCGTACTGAGCGATACAAAGAACCAGCTGAACTGTGAGATCCTGAGGAAGGTGGACATGGAGAACCAGGTGCAAACGCTCAAAGAGCAGCTGGAACTCCAGAGGAACATCAGTGAGCAGgaggTCTTGGAGATCCGAAGCCGACAGGACAGTCGTCTGGTGGAGGTGGACTCGGTACAGCGGAGAGAGTTTGAGAGTAAACTGTCGGAGACGATTCAGCAACTCCGCCACGACCATgagtctcagctgcagcagtaCAGAGAGGAGCTCGACAGGACGTTCAGTTCAAAGTTGCAGAATGCCCAGCAGGCTGCATTGGAGAAGAACCAGGTTGCTTCAGCCACCAGAGACGAACTGGAAACCACCAAGCTCCGAGTGGAGAGCCTCAGCTCCCAGCTCCAGCAGTACCAGAAAGATAAAGCGGCGCTGGAGGGCCACTGCCAGGATCTGGAGCGGACACTGGACCGGGAACGGGAGGTCTGGCAGCACCGGCTGGATCAGAAGGAGCAGGAGCAGCTGAGCATGAGGAGCCAGATGTTTGCCCAGCTGGAAGACTACGAAAACCTGCTGGACGTCAAGCTGGCCCTAGACATGGAGATCAACGCCTACAGGAAGATGCTGGAGGTGGAGGAGCAGAGGTTGCATCTGTCACCCAGCCCCTCGCAGCACGCAGCCATACCTCGGACACATGAACACAGCAGCCGCAAGCTCCGAGGGAAGAAACGCAAGCACGAGGGAGCCTCTGGCAGCTCGCCAGCCTACAAGATGTCCAGTCGCTCCACGGAGAGCGGAGCTGTGAGCGTGGCAGAGGTCGACTCCGACGGAAAATATGTCCGACTGAAGAACAACTCTGAGACGGAGCAGCCACTGGGTGGTTGGGTGGTCCGGAGGTTGTACCCCGGCTCTGGGGACCTCTCCTTCTACATCCCCCCCTCCTACATCCTGGCTGCTGGGCAGACTCTCACAtgctctgtcaaaggtgtgtgtgtgtgtgtgtgtgtggtcagatctggGCAGCAGGTGCCGAGGCGGAGGCTGATCCTGGGGACCTGATTCTGCAGGGCCACACGAGCTGGGGCCCCGTCACTGAGATCAGGGTGATTCTTCTGAACCCCAACCAAGAGgaaGTAGCAGAGCGCAGGGTGTGTATGCAGCACAGGGGTGATGAGGACACTGAATTGGAGTTTGATGAGGAATTTGTGGCGGGCAGTGACATCCAGCACTTTCGGAGACAG

Function

NR:

description
PREDICTED: lamin-L(III)-like, partial

GO:

id name namespace
GO:0005882 intermediate filament cellular_component
GO:0005198 structural molecule activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039794988.1 False 2496 mRNA 0.55 11 7330708 7344755
XM_039794989.1 True 2565 mRNA 0.55 12 7330708 7344756
XR_005638761.1 False 2162 transcript 0.58 10 7332784 7344756

Neighbor

gene id symbol gene type direction distance location
LOC120555843 LOC104937892 coding downstream 24378 7304084 ~ 7306330 (-)
LOC120555919 NA coding downstream 278231 7045853 ~ 7052477 (-)
hdgfl3 LOC103366351,LOC102309090,LOC101465811,LOC100694012,LOC106907470 coding downstream 288567 7028566 ~ 7042141 (-)
LOC120556367 LOC104932139,LOC100695351,LOC108237907,LOC102197162,LOC103129685,LOC106520888,LOC101465514,LOC103366349,LOC102224277 coding downstream 307536 7005842 ~ 7023172 (-)
LOC120556364 NA coding downstream 348347 6970278 ~ 6982361 (-)
arnt2 arnt2 coding upstream 1808486 9153242 ~ 9229577 (-)
fah fah coding upstream 1963841 9308597 ~ 9325288 (-)
chsy1 chsy1 coding upstream 2783222 10127978 ~ 10231722 (-)
selenos NA coding upstream 2888708 10233464 ~ 10241227 (-)
zgc:113274 NA coding upstream 2899368 10244124 ~ 10245386 (-)
G25955 NA non-coding downstream 1051 7328707 ~ 7329657 (-)
G25934 NA non-coding downstream 36554 7225284 ~ 7294154 (-)
G25933 NA non-coding downstream 45926 7281854 ~ 7284782 (-)
G25924 NA non-coding downstream 194482 7135909 ~ 7136226 (-)
G25922 NA non-coding downstream 252275 7078207 ~ 7078433 (-)
G26005 NA non-coding upstream 394283 7739039 ~ 7739388 (-)
G26008 NA non-coding upstream 427610 7772366 ~ 7772846 (-)
LOC120555853 NA non-coding upstream 447054 7791810 ~ 7793958 (-)
LOC120555851 NA non-coding upstream 450026 7794782 ~ 7831623 (-)
G26026 NA non-coding upstream 491142 7835898 ~ 7836325 (-)
dok4 dok4,LOC102198948,LOC100694825,LOC102775855 other downstream 637377 6642164 ~ 6693331 (-)
tpcn2 tpcn2 other downstream 740069 6534042 ~ 6590639 (-)
pop4 pop4,LOC105418436,LOC104960843 other downstream 806353 6509259 ~ 6524355 (-)
ankdd1a ankdd1a other downstream 984147 6323277 ~ 6346561 (-)
LOC120555534 LOC103369663 other downstream 1163179 6156222 ~ 6167529 (-)
G26071 mex3b other upstream 799451 8144207 ~ 8146901 (-)
LOC120555934 NA other upstream 1149597 8494353 ~ 8496635 (-)
il16 LOC102796330 other upstream 1285852 8630608 ~ 8697622 (-)
tlnrd1 mesdc1 other upstream 1388663 8733419 ~ 8758808 (-)
LOC120555589 cemip other upstream 1414845 8759601 ~ 8979144 (-)

Expression


Co-expression Network