mex3b (mex3b)


Basic Information

Item Value
gene id mex3b
gene name mex3b
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 8140884 ~ 8146927 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039794990.1
CTCAGACAGAAGCAACAGAGGACTTGAGGGAAGCCAGCCGGGGAGGGGCCCTTTGTCAGGAAGGAATATTATTACTATCTTCACTGCCGGCTCTGGAATAAATACGCTTATttgtccctgttttttttttcgtgcAACAGCACAGCCCGGGTCGGCTAGGACCAGGacttccaattttttttttatcgggAAAACAAAGGGTGTGGATGTTTTTTTGTAGCTCCTTGcactgtttttctttcctcccgcAGCCGCACTGATTTCCACTGACCAGTTGTCTTTGAGAACCGGGTCCGgttcctctcccctcctcctcccctctcctgtcGTTCTCCCCCGTTCACTCCTTCTTTACCCTCCTTCCGTTTGCCTTTTATCCGATCCCGCAACGCTGCAAAGTCGCAAAGATGCCCAGCTCGCTCTTCGCCGACAGCAGCGTCCAGGGAGATGGACTGGACGACCAGAGAGCCCTGCAGATCGCCCTGGACCAGCTCTCCTTGCTCGGCTTGGACAACGACGAGAACTCCCTGTACGACAACCAGGAGCCCCGGAAAAAGAGCGTCAACATGACCGAATGCGTACCGGTTCCCAGCTCCGAGCATGTGGCTGAGATTGTAGGCAGACaggGTTGCAAGATCAAAGCGCTGAGAGCGAAGACCAACACCTACATCAAGACGCCGGTTCGAGGCGAGGAGCCGGTGTTTGTGGTGACGGGCCGGAGGGAAGACGTGGCCATGGCCAGGAGGGAGATCATCTCTGCCGCCGAGCACTTCTCCATGATCCGGGCCTCCAGGAACAAAAACACCAGCCTGAATGGGAGCGGCACCCCGGTCCCTGGACCCCCGAACCTGCCCGGACAGACCACCATCCAGGTGAGGGTGCCGTACCGCGTGGTGGGGCTGGTTGTAGGCCCCAAGGGCGCCACCATCAAGCGCATCCAGCAGCAGACCCATACCTACATCGTGACGCCCAGCCGAGACAAGGAGCCGGTGTTCGAGGTGACGGGGATGCCGGAGAACGTGGACCGGGCACGCGAAGAGATCGAGGCCCACATTGCCATGAGGACGGGGGGCCTCATCGAGCTTCAGGACGAGAACGACTTCCACGCCAACGGGACGGACGTGGGTTTAGATCTGCATGGCCATGCCATCCTGTGGTCCAAACCCGGCGCCGGGATGACCCCCAGCTCGGCGCGCAAGCCCTTCTCCAACTACCGCAACGACTCGTCCTCGTCCCTGGGAAGCGCCTCCACGGACTCCTACTTCGGCAACAACGGCTCGCGAATGGCCGACTACAGCCCCCCCAGCCCGGCGCTCAGCTACACCGccgccaacaacaacaacaacggcaacaacaataacaacaacatcaaCGGCTTTGTGTACGGGAGTGAGACCATATCGCCCGACTGCGCTGATCTGACTTTTGACTCCTCGCCGGGGTTCAACCCCACGCCGCCGCCACCGCCAGGCCTCCTGTGGTCCCAGTACGACAGTCGCATGACACCCTCCTCCACCGGAGGCAGCTCCCCCACCCCCAGCTCCACCTCAGCCATATTCCCCACCAACGCCAACGGGATAGCGGCTAGTCACAGGCGGGGTAACGGTTGCACCCCGCAGCCCAGGCTCTCGCCACCGCTCCACGGCCACAGCGCCGGTCACGGCGAGCACCCGTTGGCCCGGAGGGTGCGCAGCGACCCGGGCGGCGGCCCGCTCAGTTTCCCCGGCTACTCTTCTCTGCCGGGGCCCCACCTCCCCGGGGTTCCGTGCGACTCCTCGGcctcgtcgtcgtcgtcgtcctcctcctcctccacctcctccggCACCAGCCGCAAGGGCAGCCGCGACTGCTCGGTGTGCTTCGAGAGCGAGGTCATCGCTGCGCTGGTCCCCTGCGGGCACAACCTCTTCTGCATGGAGTGTGCCAACCGCATCTGCGAGAGGAGCGAACCCAAATGCCCCGTCTGCCACGCCGGCGTCACTCAGGCTATACGTATATTTTCATAAGAAGCGTGACTCTTTTGACTATGTCTCGTCACCGGCGAGAACAAACAAAAGACTCTTCGTACTGCTTTAATGGGATCAGCCAAACATCCGTTTTTTTGGAAAAGTGTACATAGGTatatatgcatatgtatgtCAGAGGCTGCAGTATCCAGATGAAGGGACAGAGACACCCCCCGTTTTTGTAGTTGTTAATAATATACTGTAGCGTGGGGAAATATTTTCAACATCTTAAGTGCATGTTTTAAATATTACAGCATAGTAATCAGTAGTTCTAGTACATTGTACCCTATATTTATGAAGTGGAGAGACACAGTGGGGTCAGGACGGAGGTACTTGAGTCAAACCGTAGACTGTTAGCTGGCGGAGCCCTCCCAGTTTTGCCGATTTGAATGTAGTGAGGGGGGGGGCCATGGCATGGCTGGGGAACACGGAGGGCTCCAGCCCCAACAGGACGGCTGACTTCCAGAGATACTGCAGCTTGAGCGACAGGGTACATATCCTACATGTATAGAATCAATTTCCACACGTTGGTTAAATGACATTAATACAGATCGaagtattttattctttttttgacTTGAAAGATTATATTTCTTATCGCCAAGATGTTTacagatattttaatttaagttcAGTGAACTTTTTGTAGCTGGGTTGAaatcttgtttattttttaagtatggCCTTATGGCATTGATcactgtattattttaatatcGCACGACTGTGGGATGGGAAATCCGAGTCCACAAAATTGTGTATTGCATTTGACAGTATTCTGTTGggatggagtttttttttttttttataggttCAGCAAAAAACATAACAAGAAAGTCTTTTAAAATCTGCTTCACCCAGCATATTTTTTATTCAGTAATATAAAGCATATTTTATTCTATATTATTATGAAACATTGAAATGTACAAAACTTAGTAAGTTGAACACAAAGAAACCGTTTATGCTTTCTAAAAATTTGTATGAATTAGATTCCAGTGGGAATTACAGGCTTCTGTTGCACCACTATAGTTTtagtatttctattttaatacatttgtttACCACTTGTTTATGTATATGTAGGTGAAGTTACTTGAGCGTAAATGTACTTTATTGAGCAAAGTTTAAGAACaaagtatattttattttatgataaAGGGCCTTTAACCTCATGGTCAAATACTAATATTATATTTGCTGAGACAAGATTTGAAAAATGTATCaagagttttatttttgtgacaTTTGAAGTTATACATGATAAAAAGTAAGACTTAAGTAATGGTGCtacttcatgttttttttaagtatttctaTATAAGTCCAATAAAAACTGGTACATTGACTAGG

Function

symbol description
mex3b Predicted to enable RNA binding activity and metal ion binding activity. Is expressed in ciliary marginal zone; deep blastomere; and superficial blastomere. Orthologous to human MEX3B (mex-3 RNA binding family member B).

NR:

description
PREDICTED: RNA-binding protein MEX3B

GO:

id name namespace
GO:0003723 RNA binding molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K15686 MEX3, RKHD; RNA-binding protein MEX3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039794990.1 True 3356 mRNA 0.51 2 8140884 8146927

Neighbor

gene id symbol gene type direction distance location
efl1 efl1 coding upstream 71217 7939212 ~ 8069667 (+)
LOC120555922 NA coding upstream 357385 7775633 ~ 7783499 (+)
adamtsl3 LOC101469981 coding upstream 470083 7354877 ~ 7670801 (+)
LOC120555848 LOC107591295,LOC105891088 coding upstream 810182 7317909 ~ 7330702 (+)
sh3gl3a LOC100692766,LOC101467334,LOC103355412,LOC102293456 coding upstream 850014 7232548 ~ 7290870 (+)
LOC120556467 tmc3 coding downstream 398334 8545261 ~ 8601678 (+)
stard5 stard5 coding downstream 457349 8604276 ~ 8621712 (+)
mesd mesdc2 coding downstream 598235 8745162 ~ 8750880 (+)
abhd17c abhd17c,LOC102793890,LOC100694079 coding downstream 909406 9056333 ~ 9091510 (+)
LOC120556464 NA coding downstream 1114284 9261211 ~ 9296717 (+)
G26063 NA non-coding upstream 27493 8113186 ~ 8113391 (+)
G26028 NA non-coding upstream 294145 7846501 ~ 7846739 (+)
G26025 NA non-coding upstream 305703 7834903 ~ 7835181 (+)
LOC120555855 NA non-coding upstream 424726 7713299 ~ 7716158 (+)
G25959 NA non-coding upstream 466943 7665796 ~ 7673941 (+)
G26075 NA non-coding downstream 70059 8216986 ~ 8217378 (+)
G26089 NA non-coding downstream 103132 8250059 ~ 8250273 (+)
LOC120556411 NA non-coding downstream 107819 8254746 ~ 8256037 (+)
G26093 NA non-coding downstream 116774 8263701 ~ 8263943 (+)
G26095 NA non-coding downstream 118005 8264932 ~ 8265165 (+)
LOC120556365 LOC102793592,LOC103366350,LOC101487888,LOC102307622,LOC100694289 other upstream 1135206 6993956 ~ 7005678 (+)
rwdd3 rwdd3 other upstream 1745178 6382570 ~ 6395706 (+)
LOC120555541 NA other upstream 1851108 6262410 ~ 6289776 (+)
G25743 NA other upstream 1852807 6287048 ~ 6288077 (+)
G25708 NA other upstream 2105691 6034209 ~ 6035193 (+)
G26205 NA other downstream 606774 8753701 ~ 8760301 (+)
G26236 NA other downstream 921802 9068729 ~ 9155343 (+)
cers3a cers3,LOC102798777 other downstream 1186302 9333229 ~ 9378611 (+)
adamts17 adamts17 other downstream 1244181 9391108 ~ 9604462 (+)
asb7 asb7,LOC102792420 other downstream 1506651 9653578 ~ 9677027 (+)

Expression


Co-expression Network