rras2 (rras2)


Basic Information

Item Value
gene id rras2
gene name rras2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 24702857 ~ 24737053 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039794996.1
CTGTAGAAGGGCCCCTAGCGCCAGACATTAGTACTGGTCTGCCTGATTACACCTACTATCGGATCCACAGCTCGAACATCACAGTGTTGTCGAGGCAGAAACACGGTCAGGCGTATGGACAGGCAACCGTAGCTCCGCAGATCCCTCCCTATGTATCCGTGCACCAAACGGACTACACCGACGAGTCATTTTCGGCACATATCTGGACTCTTCTGTACGCTCTGGTCTCTCACACCGCAGGGCCTCTTCAGTTAACAGAAAAAAGTGGGTGTTTGGTGGTGTTCcggcagcagcaggagcagcagcagcagcagcggcggcggcggcggcggcggcgagCGCAGCGAAGTGTCCTCGATGGCAGGCTGGAAGGACGGCTCGGTGCAGGAGAAGTATCGGCTGGTTGTGGTCGGCGGCGGCGGAGTCGGGAAATCAGCCCTGACTATCCAGTTTATTCAGTCGTACTTTGTCACCGACTATGACCCCACGATTGAAGACTCTTATACCAAGCAGTGTGTGATTGACGAAAGGGCGGCCAGACTTGACATCCTCGACACGGCTGGACAGGAAGAGTTTGGAGCCATGAGAGAACAATACATGAGGACAGGGGAGGGCTTCCTGCTTGTCTTCTCAGTCACTGACAGAGGAAGCTTTGAAGAAATCTACAAATTCCAAAGACAAATTCTCCGAGTGAAAGACAGAGATGAATTCCCTATGATCCTTGTAGGAAATAAAGCAGATCTGGAACTACAGAGACAAGTAACCCAGGAAGAGGGCCAGCAGCTGGCCAGACAACTGAAGGTCACGTATATGGAGGCTTCAGCCAAAATCCGTATGAATGTAGACCAGGCTTTCCACGAGCTGGTTAGAGTAATCAGGAAATTCCAAGAACAGGAATGTCCACCGTCGCCAGAACCtacaagaaaagagaaagacaagAGTGGCTGCCATTGTGTGATCGTCTGAGTCGGCCTTATCACTGTAACTCATGCAGCTACTCTCTACCACCCCACCCACTCTGCCTGACATCACATCCTAAGTGGATGACTGACCGCTGCCTTCTCCACGTGCATGACTTCAGACAGCCTTTTCTGAAATACTTTGATCAGGAACTGCTGTCCCCAGGACATCACTATGGACAACTGACAATGCCAAATTTTAACACCACTCTACCTTCAGCCCTAATCTAATTCACATGAGAGAGTCCCAACACTAAACATTGCCTTCTAAATCAGCCTGACAAATTAATGTTTTGTACTCTGAAGGACTTCTCTTGCCTTGATGTGACATTTGTACTTGCTACCGAGATTGAATGAAAACTATATATCCAGAATGTTAATGAGTTTCTTCAGTTTTCCGTGTCTGACCAGAGCAGAGATTATCTTATGAAGCTTTGTGTATGTTGTGCCATATCCACCTTTGCTCCCATGTGCTAATCTGCTACTGTACATATGTGACATTTGTTGTGATTTTCAAAGTGTACTTTTAATGATCTATTAAATCACCACAGTGCAGTGTGTGAGGTTGAGTTTGGTTTTACGTATATGAAAATGAATATATAagtatgtatataaatataaagcCTAGACAGCCCTTAAAGCTACAATGATAGAACTTTCTGGCATTCTGCAGTGGATTTTTCTTCTTTGCCTGTGGTTTCTGCTTTCATCTCAATTTCCAAATATGGAGTGTCTActgtatttgatttttttatttaaagtcttATAGATTGAACCATTCTTATCATATGCCATCTTCTCAATGTACCGAAAGTAGCAAATTTGTCTGAAATCTTTTCCTCGAAGGTGGCGGTTCAGTCAAAATTGGACATCATACATTGTTTCAGATTTCTAAGAAGCAGTAGATGATTTTATTGGTAGCACATTGTGTATCTTTGACAACTAACATGATTTCAGATCAAAGCACTGAACACTGTATGTTCTATATTCAACTTCTGACAAGTAATGTTATCAAATCCATTTGTTGCAAATCAAGAAGCTTTCAGAGCCCCGTTCAGTTCAGATCATTCCAATGTAATGCATCTTTTCTGTCAAACATTTAGTCTACGATATAGATCAAATCAAAAACTGTTATATCATTCCAATAACACAGTggcattgtatttgttttgtgtccTTGAATTATTCTCatagattacttttttttttaattttttttttttaccccccaATGATTTGTCAGTTGGAAAACCAGGACAAGTGGAAGCATTGAGCCGCACATCGTAAAATAGCCGTTTTCCAACGGGACGTGAACTCACCGGACCTGCCACCTGTGGAGCTATCATCACCACAGGCACAAAATACTGTTCTGCCTCCCCTTTCCACTTCTGTACTTCTGTTCGGGCATATAAATGAAGTActgcagtttgtttttcatgtcaTCATCTTGTAATATAAACAACAAGAAAATCAGATGATGGAGCTAATGGACTTGATTAAATGTTTCTACTCTACTTTTATACATTATTTTCTTATCAAACTAGTTGACAAGtatttttatatgtttataaGTGAATACACATTCACAGCatagctgtgtatatatgtaaagaggaatatttaattatattgaTTATTTTAAACTGAAGATAACTGTTGGCCCAAATTTACAAAATTGGACTCTTCACCCAGATGTGACCAGAATGTTATTTCTTATTGTGGCTTCGTAATGGAGAATATATTTATCTTTGAGGCGTTCACCACCAGCTCAGAGCGTAAAATTCCAGGTCAGGTGGGAGAGGGTCTTAGAAATTATTCTGGTCTTTAGGAGCTTAAAACTACATGAAGGAATTATTATAATCAGTGAGTTTTGAAATACCCACTTCCCATCTTATTGGAAATCCTAGTGTACATCCAAATCAtactgtttctttctttttcttccataTCGGTGTCTTTTGCCCTGTGTCTAGCTTTTGGtgcaaaaataaaatctgtcatTGAGCCA

Function

symbol description
rras2 Predicted to enable GDP binding activity; GTP binding activity; and GTPase activity. Predicted to be involved in Ras protein signal transduction. Predicted to act upstream of or within signal transduction. Predicted to be located in membrane. Predicted to be active in plasma membrane. Is expressed in several structures, including adaxial cell; head mesenchyme; hindbrain neural plate; musculature system; and notochord. Human ortholog(s) of this gene implicated in Noonan syndrome 12. Orthologous to human RRAS2 (RAS related 2).

NR:

description
PREDICTED: ras-related protein R-Ras2 isoform X2

GO:

id name namespace
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0006184 obsolete GTP catabolic process biological_process
GO:0016020 membrane cellular_component
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function

KEGG:

id description
K07830 RRAS2, TC21; Ras-related protein R-Ras2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039794996.1 True 2967 mRNA 0.42 6 24702857 24737053

Neighbor

gene id symbol gene type direction distance location
copb1 copb1 coding upstream 2687 24688026 ~ 24700170 (+)
LOC120556334 LOC104919371,LOC103363468,LOC104965174,LOC102308327 coding upstream 80974 24617556 ~ 24621883 (+)
caprin1a LOC103356992,LOC104943339 coding upstream 480411 24206711 ~ 24222446 (+)
ext2 ext2 coding upstream 552952 24127460 ~ 24149905 (+)
dagla dagla coding upstream 577037 24093243 ~ 24125820 (+)
tub tub,LOC102789439 coding downstream 1575 24738628 ~ 24787768 (+)
ipo7 ipo7 coding downstream 447627 25184680 ~ 25200964 (+)
swap70a swap70,LOC104918979 coding downstream 464972 25202025 ~ 25215060 (+)
ampd3a LOC104930104 coding downstream 589193 25326246 ~ 25355853 (+)
adma NA coding downstream 595931 25332984 ~ 25335479 (+)
G29579 NA non-coding upstream 97659 24602982 ~ 24605198 (+)
G29535 nucb2,LOC103363466,LOC101472988,LOC102310665,LOC105916282,LOC101163155,LOC107085590 non-coding upstream 474941 24226851 ~ 24227916 (+)
G29477 NA non-coding upstream 552102 24150510 ~ 24150755 (+)
G29460 NA non-coding upstream 740525 23960107 ~ 23962332 (+)
G29441 NA non-coding upstream 823415 23816706 ~ 23879442 (+)
G29685 NA non-coding downstream 361117 25098170 ~ 25099593 (+)
G29747 NA non-coding downstream 483993 25221046 ~ 25221437 (+)
G29786 eif4g2,LOC102309340 non-coding downstream 680754 25417807 ~ 25420506 (+)
G29787 NA non-coding downstream 687856 25424909 ~ 25426358 (+)
G29790 NA non-coding downstream 700597 25437650 ~ 25437859 (+)
sox6 sox6,LOC103363464 other upstream 247169 24320064 ~ 24455688 (+)
plekha7b NA other upstream 388212 24235723 ~ 24314645 (+)
G29433 NA other upstream 970386 23727012 ~ 23732471 (+)
igdcc3 igdcc3 other upstream 1185594 23443149 ~ 23517263 (+)
G29292 NA other upstream 1565830 23136732 ~ 23137027 (+)
pkd1l2a vat1l,pkd1l2,LOC102776808 other downstream 1118786 25855839 ~ 25883360 (+)
nfat5b nfat5 other downstream 1146401 25883454 ~ 25927726 (+)
LOC120556198 LOC103371916,LOC104965843 other downstream 2558704 27295757 ~ 27316181 (+)
nedd4a nedd4,LOC103371920,LOC102785817 other downstream 2581317 27318370 ~ 27351837 (+)
LOC120555577 NA other downstream 2671987 27409040 ~ 27410250 (+)

Expression


Co-expression Network