depdc7a (depdc7)


Basic Information

Item Value
gene id depdc7a
gene name depdc7
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 29284306 ~ 29294681 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039795045.1
GGAGTTAGTTGCGTGCGTCACGTTGTGAATTGAAGACCAAGAACATGGTCTGAATGGCTGTCTTTACAGTCACTGGAAGACGTTTTCATGCACCGAACACCAGaAGGCATGGCTGGGAAGCCTTTCCGGGCCACCTATATCTGGGGCAGCATCATCTCCAATCTCCACACTCGTGTGGCGGTTAAGCGCCGGCGCCACAACCTCAAATCCTACCATGACTGCTTCCTGGGCTCAGAGGCTGTGGACGTGGTGCTGGGACACATCACCCTGAACCGTTTTTTTGGTGATGAGGCGGTGCCCCGCTACAAGGCCGTCCGTCTCTGTCAGGCACTGATGGACTCCAGGGTGTTTGAGCCGGTGGGCGTCAAAGTTTTTGGGAAGGAAAAGAAGCGAGCCACATTTGAGGACAGTAGTTTCAGTTTGTACAGGTTCCTGAGCCCGACGACTGGCTCCTCATCATCGCTGACCAACACCAACTCTCTCTCCACTACCACCATCGAGAGCGGCTATGACTCACCGAGAATGAACAGGAACGAGAACGGCTACAGTCCGTCACATGAAAGACAAGGCATGCCAAGCTACTCCACCCACTCCCCTGTCAAAGCAAACAAATCACTGGAGGACGTGCTGGGAAACCTCAACCTAAGCTCCACCATCACTCCTCAGATGATCAACCTCGGCCTCTCACAAGAGCTTGTGGATGAGGTGTGGCACCAGCAGGCGGTGTTCAGGCTCTTGCAGCTGATAGAGCTCCCCCTGTTGGAGAAGCTGTTAGAGGGTAAAGACACATCGCGGCCCCCCCTGCATGGCATGGACAGCGACCCGGACCTGTTGTATACATCAAGCTACCTAGACAGAGAGGTCCTCAAGGCCTTCAGTGAAGCACAGGCTGATGAGTGGATGTCGGGGGCAGTGGACTGTCTGGAGTTTCTTCCTGATGAACTGGTGGTGGAGGTCAGTCGAGGTTTGGCCGGTTGTGCTGACGACATGCTCCGGTGTAAGAGTCTGCTCTACGAGGTCCTGGCTCAGCATTacggacacacacaacagccaCCTCTGCTCAGCAACCACGTGTTCGACATCCACTCTGGCATCTCCGAGCTACTTGTGAACGGCAAGCAAGAGCAAGCTCTAGAGGCTCTGCAGCTGAGCCTAAAGCTGCAGGACTCTCGCAGCAGGGAGGAGCTCCGCAGGCTCCTGAGATTCATGGCTGTCGCGGCCAAACCACAGGAGGTCAAACTGCACAAAGAGATCGAGAACAGAATGGCAGTGAAAAGGTCTTTCTCAAGTGCCATCGTCTACAGCAGAAGACTCTCCAAAGGAAAGGTGGACTTGATGGTTCTGTTCATGATGGATAACCACTACGATCTGTTCAAAATTCCCGTTTCATTGCACAAGATGGTCAGTGACAGAATAATGAATATTGTGAAAGGGAAGGATCCAGATGTGACAACAGGACCAACGTACTGCACAAGAGTGAGTGCTAAGGCCTACTcagaaaatacacaaaaaaacactaaagaGGAACTTTGGTCCTTGCTCCAGACCATCCATGAGAACCCTAAACTCTCCACTAAAGAGAAGAGACGGCTGCTGGGACAGTTTTATAAAGGCCATCCAGAGATTTTTGTTCAGTACTTTGGAAATAAGATTGTCTAGTGTCAACATGTTGCTACAGTGATATTTATTATCATGATCATGTATTATAAAAGAGGCAGATGTAAGAACAAAAGCTAATGTGATGTAAATTCTAAGATGTGCACAGTAGAATGTGGATTTTATTTACTTGTATGTAAATAGTTTAGACTACTGAACAAGAATGTGAATTTTAACTGTGGAACTTGTAATGAGCTGCGATATTTAAGGGCAAATTTCATTTCTTAGATATTTTCTTTGGTGCAGGCCACTAACATGAAATGTCCTTGTCAGTTATATGTGAGACTGTAACTTACCCAGAATGACAAAATGAACCAAGTGTTCttgagagtaaaaaaaaaaaagtttttacacTGCAACGCGTCTTGATGGCATTCGGACTGTCTGCATATATCGCTTTTCAATGGATGTATTCTTTGTGCTTGTGCAATAGGAACAGTGTTAGcaataaaaatgtgtctgttcatGTGGTTTCTCGTATACAATGTGATGCACAGTAGAGCTATGTCTTGAGGAACCCTCAAACGGAAATTTGAACCTGGAAATTTAAAGTCCAATGTTGTGCTGTAGTAAACAGTCAGAGGCATTCATGAGAATCAGCCCTCTGGGTTTTTGTGTTTGCTGGAACATATCAGCAAAACAGATGTTTGtacgttgttgtttttttaacttaaaaccTTAGCCGCGTTTTAGTGGTATCTTCAGGGTTCTGTTTTGAATAAGGTTTATGTATTCATTCGAATCAGCTGAGGAAATCGCTTCCACATTTCCAGGTGACATAAGCATTCCCAGACTAAGTTTAAACCACTCACATCTTCTTTGTATTTTGGCAAATCTTAATAAAATTCAACTGGAATTGTGTAACATTCATACATGTACATTGCCCCTTTTCATCGCAGACACAAAATGTGTGTATTCTGATAAGAAAAAGAGAACAAATGGAATCTGGTTTGTCAAGTTATTTATCCAGTTTGCAGTATGTTGTGTCCATTCTTACTTGACCCCTACACAGGCCTTGCACAGACTTACAGTCCCCTCCTTTTTAATAATGAGGCCCAATTGTGAAATCTAAGGCTGTTTTTTTGCTATTGAGATTCCCAGTCAACTAACGAACTTGTGAAATTGTTTGCTActgtttttctgcaaaataGAAGAAGTAGTTTGGAACTACTGTAATGTTGAGTTTATGTTTCATAAAAGGCCAGTACTGTT

Function

symbol description
depdc7 Predicted to be involved in intracellular signal transduction.

NR:

description
PREDICTED: DEP domain-containing protein 7

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039795045.1 True 2868 mRNA 0.45 9 29284306 29294681

Neighbor

gene id symbol gene type direction distance location
kiaa1549lb kiaa1549l coding downstream 67574 29154972 ~ 29216732 (-)
LOC120555430 galnt8,LOC103358106 coding downstream 148245 29126788 ~ 29136061 (-)
spon1a spon1 coding downstream 219749 28985561 ~ 29064557 (-)
syt9a LOC103368648,LOC102215875,LOC102789824,LOC101479370,LOC100702345 coding downstream 320633 28941368 ~ 28963673 (-)
ppfibp2a ppfibp2,LOC102297953,LOC101477983 coding downstream 346363 28916661 ~ 28937943 (-)
qser1 qser1 coding upstream 4674 29299355 ~ 29309999 (-)
eif3m eif3m coding upstream 23408 29318089 ~ 29326464 (-)
rcn1 rcn1,LOC102786392 coding upstream 57567 29352248 ~ 29375600 (-)
LOC120555582 LOC106964557,LOC103462855,LOC102220269,LOC103136529 coding upstream 228077 29522758 ~ 29538735 (-)
rnaset2 rnaset2,LOC103368766,LOC104927783 coding upstream 246926 29541607 ~ 29552473 (-)
G30759 NA non-coding downstream 143668 29140354 ~ 29140638 (-)
G30691 NA non-coding downstream 615342 28668598 ~ 28668964 (-)
G30644 NA non-coding downstream 891788 28342700 ~ 28392518 (-)
G30634 NA non-coding downstream 1058859 28225093 ~ 28225447 (-)
G30586 NA non-coding downstream 1246099 28037134 ~ 28038207 (-)
G30852 pax6 non-coding upstream 92076 29386757 ~ 29396683 (-)
G30898 NA non-coding upstream 320759 29615440 ~ 29616375 (-)
G30905 NA non-coding upstream 366987 29661668 ~ 29662088 (-)
G30969 NA non-coding upstream 867799 30162480 ~ 30288433 (-)
G31013 hk1,LOC101156878,LOC107381906,LOC106513162,LOC102780719 non-coding upstream 1048735 30343416 ~ 30343902 (-)
LOC120555471 hipk3 other downstream 15123 29217853 ~ 29269183 (-)
mafa maf,LOC101477682,LOC100702616,LOC102790406,LOC102298902,LOC104927625,LOC102192535,LOC105919746 other downstream 437341 28770001 ~ 28846965 (-)
G30693 NA other downstream 614438 28669191 ~ 28669868 (-)
LOC120555801 LOC103366895,LOC102194278,LOC102079963,LOC102301182,LOC101475385,LOC102792507 other downstream 734306 28447956 ~ 28550000 (-)
dbndd1 dbndd1,LOC103136566 other downstream 1210827 28046759 ~ 28073479 (-)
prrg4 NA other upstream 15869 29310550 ~ 29314709 (-)
elp4 elp4,LOC103373817 other upstream 107354 29402035 ~ 29461236 (-)
LOC120556497 csmd1,LOC102783723 other upstream 322639 29617320 ~ 29965747 (-)
fam120b fam120b,LOC104944276 other upstream 1220574 30515255 ~ 30532142 (-)
cdc42se2 cdc42se2,LOC103398548 other upstream 2813891 32108572 ~ 32117250 (-)

Expression


Co-expression Network