mespaa (LOC101162828)


Basic Information

Item Value
gene id mespaa
gene name LOC101162828
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 289261 ~ 290375 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039795072.1
CTAGGTGTCAGCCCTGCTCCCAGAGCTTCTCAGGACCAGAGGTGGCTGCTGGAGGTGCAACCTCGCACCTCCCACCTCATATATGGAGCAGCCTCCCTGGTCTTCCTCACTATCCTCTGCCTGCCTCACCAGCAAGACACTGACCACTCACTGCTCAGGGAAGAGCTTCCAACCACAGCACCGACTACAACAGCTGCAGCTATGGAGGTGTCCTACTGCTCTCCTCTCCAGCTCCAGGACAACTCTTTCCTGTTTGACTGCGAGTCCCTGCTGGACAAATCCTATGATCCTCTTGCCCATGATCCAGCCTTGGACCCTGGTTACTTCAGCGCTGGCAGCAGCCTGTCTCCCACCTCTTCTGTGGACTCATTCTGCTTCTCCCCTACCTCCCTCCAGGCTGCCGGAAATGAACAAAACATTTTGGACAGTTTTATCTTTCAAAGCCCTGAAGTGCCTCATCTTACCCACGAGACACAGACTCTGCCCTGCTCAACATCCTCCAATCCAATCACCTCCACCATAAAGAAATCCAGATCCAGGTATCCGGGGAAGAAGCGCCAGACagccagtgagagagagaagctgAGGATGAGGGATCTGACCAAGGCCCTGCAACACCTCAGGACGTACTTGCCGCCCTCAGTGGCACCAGCCGGACAGACCCTGACCAAGATCGATACGCTGCGCCTCACCATCCGCTACATCTCCTACCTGTCGGCTCAGCTGGGCCTCAGCAAGGAGGTGCTGGAACAGAGGTCCTCAGGTTTTGTGGAGCAGCCCCAAAACCTCAGCCAGTTCCTGGGTCAGCCAACAGCCAGCTACAGCCCACAAGAATCAGACTGCAACTCCATGAGCACAGCCCAGCTGTTCTCTCTGCAGCACTCATATCAGGTTTCAAATGGAGTTTGCTTCACCAGCGAGCAGTACTGGatgccacagcagcagcagcagcagcttcaaaATGCAGCCTTCTCTGGACAGTGCTGA

Function

NR:

description
mesoderm posterior protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039795072.1 True 987 mRNA 0.56 2 289261 290375

Neighbor

gene id symbol gene type direction distance location
igf1rb LOC103359504,LOC104920736 coding downstream 55667 173297 ~ 233594 (-)
lrrc28 lrrc28 coding downstream 121746 160255 ~ 167515 (-)
LOC120555880 LOC104920738,LOC101079833,LOC103149866,LOC103379309,LOC103462608,LOC100696143,LOC107382039,LOC101468238 coding downstream 135870 100108 ~ 153391 (-)
mespba LOC103359507 coding upstream 3309 293684 ~ 296287 (-)
sv2ba LOC103359500,LOC101162590,LOC101062552 coding upstream 11543 301918 ~ 326728 (-)
mrpl46 mrpl46 coding upstream 731588 1021963 ~ 1030055 (-)
pdpr pdpr coding upstream 747380 1037755 ~ 1056294 (-)
LOC120556384 LOC104919714 coding upstream 886087 1176462 ~ 1190886 (-)
G24785 NA non-coding downstream 109051 179310 ~ 180210 (-)
G24782 NA non-coding downstream 194609 93035 ~ 94652 (-)
LOC120555933 NA non-coding downstream 202561 85698 ~ 86700 (-)
G24818 NA non-coding upstream 39403 329778 ~ 330358 (-)
G24819 NA non-coding upstream 40020 330395 ~ 333131 (-)
G24833 NA non-coding upstream 137327 427702 ~ 470734 (-)
G24862 NA non-coding upstream 295657 586032 ~ 586344 (-)
G24864 NA non-coding upstream 300636 591011 ~ 591350 (-)
ntrk3b NA other upstream 415782 706157 ~ 921549 (-)
pnoca NA other upstream 770729 1061104 ~ 1105167 (-)
LOC120555898 mctp2 other upstream 1120299 1410674 ~ 1457108 (-)
LOC120556048 abcc12,LOC101479372,LOC101076737,LOC102203605,LOC100701509,LOC102304683 other upstream 1219790 1510165 ~ 1555646 (-)
LOC120556047 abcc12,LOC102304683,LOC101479372,LOC102203605 other upstream 1297169 1587544 ~ 1642348 (-)

Expression


Co-expression Network