mespba (LOC103359507)


Basic Information

Item Value
gene id mespba
gene name LOC103359507
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 293684 ~ 296287 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039795073.1
ATGGATATCTCCCCGGTCCCTCTGCTCAACTACGGCCTGCAGTACCAGTGGTGCTACGACTCAGACCTGTCTAGCATTTCCTCTTCAGAAACCCTCTCCCCGGTCACCTCTATGGACTCCAGCCTCTCTCCGTCCTACCAGCAGCTGCCACAGTCCACTCCTAAGACAGCTAAGACTGGATATTCCCAGAGCCTCAAATCGTCCCTGTCTGGACGTGGCAGAAAAAGGGGCCTAGCCACCCGGATGCGCAGCAAGCAGAGAGAGAGCGCCAGCGAGAAGGAAAAGCTGAGGATGAGGGATCTGACCAAGGCGATGCATCATCTCAGATCCTACCTCCCGCCCTCAATGGCCCCCGCCGGACAGACCCTGACGAAGATAGAGACTCTCCGCCTCACCATCCGCTACATCTCATACCTGTCGGCCCAGCTGGGCCTCAGCGAGGAGGTGCTGTTTCAGAGGAGGGAACAAGGAGATACCTCGGCCAGCGGCACCTCCTCACCTGACATCCTCAGCTACTTCCAGCACGCTGCCATGGGAGGACAGGAGGAGGCCCAGCTGCAGAACCAGAGCCTGTACCCAGCCCAGTGTTACAGCCAGAACACCATGCTGCATTCTGGGAGCTGTAGTTTTGGAGTGGATCAGTACAGTACACAGTACATTGAAGCTCCTCAGGGAGACATGAGCATGGATGCCATCCTGCAGTCATCTCCAGCAACACAGCCCTGCTGTCAGCATCGTCGCTGTTAA

Function

NR:

description
PREDICTED: mesoderm posterior protein 1-like

GO:

id name namespace
GO:0046983 protein dimerization activity molecular_function

KEGG:

id description
K09076 MESP; mesoderm posterior

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039795073.1 True 747 mRNA 0.57 2 293684 296287

Neighbor

gene id symbol gene type direction distance location
mespaa LOC101162828 coding downstream 3309 289261 ~ 290375 (-)
igf1rb LOC103359504,LOC104920736 coding downstream 60090 173297 ~ 233594 (-)
lrrc28 lrrc28 coding downstream 126169 160255 ~ 167515 (-)
LOC120555880 LOC104920738,LOC101079833,LOC103149866,LOC103379309,LOC103462608,LOC100696143,LOC107382039,LOC101468238 coding downstream 140293 100108 ~ 153391 (-)
sv2ba LOC103359500,LOC101162590,LOC101062552 coding upstream 5631 301918 ~ 326728 (-)
mrpl46 mrpl46 coding upstream 725676 1021963 ~ 1030055 (-)
pdpr pdpr coding upstream 741468 1037755 ~ 1056294 (-)
LOC120556384 LOC104919714 coding upstream 880175 1176462 ~ 1190886 (-)
tdp1 tdp1 coding upstream 896753 1193040 ~ 1203082 (-)
G24785 NA non-coding downstream 113474 179310 ~ 180210 (-)
G24782 NA non-coding downstream 199032 93035 ~ 94652 (-)
LOC120555933 NA non-coding downstream 206984 85698 ~ 86700 (-)
G24818 NA non-coding upstream 33491 329778 ~ 330358 (-)
G24819 NA non-coding upstream 34108 330395 ~ 333131 (-)
G24833 NA non-coding upstream 131415 427702 ~ 470734 (-)
G24862 NA non-coding upstream 289745 586032 ~ 586344 (-)
G24864 NA non-coding upstream 294724 591011 ~ 591350 (-)
ntrk3b NA other upstream 409870 706157 ~ 921549 (-)
pnoca NA other upstream 764817 1061104 ~ 1105167 (-)
LOC120555898 mctp2 other upstream 1114387 1410674 ~ 1457108 (-)
LOC120556048 abcc12,LOC101479372,LOC101076737,LOC102203605,LOC100701509,LOC102304683 other upstream 1213878 1510165 ~ 1555646 (-)
LOC120556047 abcc12,LOC102304683,LOC101479372,LOC102203605 other upstream 1291257 1587544 ~ 1642348 (-)

Expression


Co-expression Network