LOC120555909


Basic Information

Item Value
gene id LOC120555909
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 3421203 ~ 3422406 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039795099.1
AAAGCATGGATGCTCGGCTGCGAGAATTTTTGAAGGAGCGCCAAATTGAAGAGGATGTGATTCAGAAACTTCAAGATGAAAATATTGATGAAACTGTCATTCCACTAATGACAGACAGTGACCTGGCCAAGTACATCCCTAAAGCTGGGGATAGAGTCTCCACTGTGGCCTTTTGCAGACAAGCAGCACTAACACAACAAGCACCATCCAGGAAAGAAACCATCCTATCAAGGCTACGTCAAAGACTCTCCGGAACTGAGGGGACACCTAGAGCTCCACAAAACAAATCATCTAAGTGGGCAGGAAATGCAAATGCCAAACGGAAAGTGAGGCGGGTTGAGGTTGGCTGGATGGATTTCGATGTGAAAGAGCAAAGGTACAAACAGGTGAAGTCTGTAAGCGGTGGAGGAACCAGGCATCTCTCTGTTGACAAAGATGAAACAGTAGCAGATATCAAAGTTATGGCTGAAAATCTTTTCTTCCCCAATGgcctttccaaaaaaaaaaaagatctttccCACTATTCAACTCATATTGAGAGCTCCCAGACACATGTTAAGATGTCCAATAGAGTAGAAGAGTTGTATAACCAAAGCAAGGTCAAAATTCTCAGACTTTATTTGTGCAccaaaaagaaaacaggacCGCAGCCCGcagtaggagaggaggatgaTCTCTCAGTAACCCAGCCCCCATTGATAGATCTCACTGAACATGAACAGAAACAGGCTGTTGAAAATCTGTTGGTGGAAAACAGAAATTCAGAGTCCCCAAATGTCGATGAAACTAATTATGGAGCTTCCTCAAGTGAAGACTTGGAACTGAATGACACATTACAGTGGGATGGTCTGCTAACTCTGGGTtctgtagaaatatattgggtttag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039795099.1 True 887 mRNA 0.43 2 3421203 3422406

Neighbor

gene id symbol gene type direction distance location
slc7a6 slc7a6,LOC104919890,LOC103355407,LOC102782072 coding upstream 115715 3280076 ~ 3305488 (+)
adgrg1 NA coding upstream 148025 3250608 ~ 3273178 (+)
LOC120555875 LOC103368003,LOC100711702 coding upstream 185184 3223869 ~ 3236019 (+)
phkb phkb coding upstream 1238449 2039463 ~ 2182754 (+)
slc7a10a LOC104919817,LOC103369274 coding upstream 1603209 1789953 ~ 1817994 (+)
mtss1lb LOC102779958,LOC108237900,LOC103462242,LOC103355402 coding downstream 201228 3623634 ~ 3724143 (+)
LOC120556182 LOC101467318,LOC102294465,LOC102206054,LOC108237897 coding downstream 450626 3873032 ~ 4152064 (+)
LOC120555911 LOC102783822,LOC103462246,LOC106925612,LOC102294465 coding downstream 741270 4163676 ~ 4254074 (+)
LOC120555425 NA coding downstream 910659 4333065 ~ 4341288 (+)
zgc:162297 LOC103355515 coding downstream 2219877 5642283 ~ 5654255 (+)
LOC120555487 NA non-coding upstream 6668 3413012 ~ 3414535 (+)
LOC120555486 NA non-coding upstream 31478 3388522 ~ 3389725 (+)
LOC120555485 NA non-coding upstream 32690 3382656 ~ 3388513 (+)
LOC120555484 slc7a6os,LOC102781591 non-coding upstream 41288 3309375 ~ 3379915 (+)
G25288 NA non-coding upstream 280816 3139689 ~ 3140387 (+)
G25380 NA non-coding downstream 40651 3463057 ~ 3463523 (+)
G25418 NA non-coding downstream 191840 3614246 ~ 3614516 (+)
G25436 NA non-coding downstream 393431 3815837 ~ 3816148 (+)
G25486 NA non-coding downstream 923232 4345638 ~ 4348769 (+)
G25498 NA non-coding downstream 1024189 4446595 ~ 4446914 (+)
adamts18 adamts18 other upstream 1109046 2240414 ~ 2312157 (+)
G25204 NA other upstream 1337884 2081958 ~ 2083319 (+)
G25173 dnaja2,LOC106524269 other upstream 1578392 1839333 ~ 1842811 (+)
mapk8ip1b mapk8ip1,LOC102793463 other upstream 3336777 11843 ~ 84426 (+)
mmp15b mmp15,LOC104948393 other downstream 58891 3481297 ~ 3518086 (+)
G25431 NA other downstream 362527 3784933 ~ 3785542 (+)
G25512 NA other downstream 1147967 4570373 ~ 4575645 (+)
tshz3b tshz3 other downstream 1371409 4793815 ~ 4837285 (+)
G25708 NA other downstream 2611803 6034209 ~ 6035193 (+)

Expression


Co-expression Network