ipo7 (ipo7)


Basic Information

Item Value
gene id ipo7
gene name ipo7
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 25184680 ~ 25200964 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039795114.1
TTATTCACTGCTTCCTTTCGCGCCGGGTAACCGGAGAGCCGTGCGTCCATGTGCGCAGTGACTGGGAATTGAGATAGACGTCTGAAATATTAAAATCCGAGCCGTAAACAGAGTTTTAGTTATGGATCCTGAGTCTTTGGTCGAGGCCCTTCGGGGGACGATGGACCCCAATCTTCGTGAGGCCGCGGAGAGACAGTTGAACGAGGGTCACACCCAGGTAAACTTTGTGTCCACTCTGCTGCGTGTCACCATGTCTGATCAGCTGGATTTGCCTGTCAGGCAAGCAGGTGTGATTTACCTTAAGAACATGATAACCCAGCATTGGAGTGATGGCGACGGTTCAGGCACAGAGACTCCTGTCAATAACATCCCTGACGAGGACAGGCAGTTCATTCGAGACAACATAGTGGAGGCCATCATCCACTCCCCCGAGCGCATCAGGGTCCAGTTGACAACATGTATCCACCACATGATTAAGCATGACTACCCCGCCAAGTGGACGACCATCGTGGACAAAATTGGCTTCTACCTGCAGTCAGACAACAGCGCAGGATGGCTTGGCATCTTGCTCTGTCTTTACCAGCTTGTCAAAAACTACGAATACAAAAAACCAGAAGAGCGTCAACCTCTGGTGGCTGCCATGCACATCTTCATGCCCATGCTGAAAGAACGCTTTATCCAGCTGCTTCCTGACCACTCCAGTGACTCTGTCCTCATACAGAAACAGATCTTCAAAATCCTCTATGCCCTCTTTCAGTACAACCTGCCCCTGGAACTCATCAACAGACAGAACCTGACAGAGTGGATGGAGATCCTGAAGACGGTAGTGGATAGAGATGTGCCTCCGGAGACGATGCAGATAGATGAAGATGAGCGTCCTGAGCTGCCGTGGTGGAAGTGTAAGAAGTGGGCCCTTCACATCTTGGCTCGACTGTTTGAGAGGTATGGAAGCCCAGGCAACACAACCAAAGAGTATGCAGAGTTTGCTGAACTTTTCCTCAAAGAATATGCAGTTCCTGCTCAGCAGGTGCTGTTGAAAGTCTTATACCAGTACAAGGAAAAGCAATATGTGGCTCCCAGAGTACTCCAACAGACACTGAACTACATCAACCAGGGCATAGCACATGCTCTGACGTGGAGAAACCTCAAGCCCCACATCCAGGGCATTATTCAGGATGTGGTCTTCCCCCTCATGTGTTACACAGACAGTGATGAGGAGCTGTGGCAGGAGGATCCATACGAGTACATCCGAATGAAGTTTGATGTGTTTGAGGACTTTATCTCTCCAACAACAGCAGCCCAGACGCTCCTCTTCACTGCTTGTAACAAGAGGAAAGAGGTGCTGCAAAAGACTATGGGCTTCTGCTACCAGATTCTCACTGATCCCGCCTCTGACCCCAGGAAAAAGGATGGTGCCCTTCACATGATTGGCTCTTTGGCTGAAATCCTGCTGAAGAAAAAGATTTATAAGGACCAGATGGAGTTCATGCTGCAGAATCACGTCTTCCCCCTGTTCCGCAGTGAACTGGGCTACATGAGAGCCAGGGCCTGCTGGGTGCTGCATTACTTTTGTGAAGTGAAGTTCAAAAGTGACCAGAACCTGCAGACGGCTCTTGAGCTCACCCGCCTTTGTCTAATCAATGACAACGAGATGCCAGTTAAGGTGGAGGCTGCTATTGCCCTGCAGGTTCTCATCAGCAACCAGGAGAAAGCCAAAGAATACATCACCTCCTTCATCCGGCCAGTGATGCAGGCACTCCTGCACATTGTCAGGGAGACGGAGAATGATGACCTCACCAACGTCATACAGAAGATGATCTGTGAATACAGTGAGGAGGTGACTCCAATTGCTGTGGAGATGACACAGCATTTGgCTATGACGTTCAACCAGGTGATTCAGACGGGCCCTGACGAGGAGGGCGGAGATGACAAGGCAGTGACGGCCATGGGCATCCTCAACACCATTGACACATTGCTAAGTGTGGTGGAGGACCACAAAGAGATCACCCAGCAGCTGGAGGGCATCTGTCTGCAGGTGATCGGCACTGTGCTGCAGCAACATGTACTGGAGTTCTACGAGGAGATCCTGTCCTTGGCTCACAGCCTGACCTGCCAACAGGTGTCACCACAGATGTGGCAGCTCCTTCCACTGGTGTATGAAGTCTTCCAGCAAGATGGATTTGATTACTTCACAGatatGATGCCTCTTCTTCACAACTATGTCACAGTTGACACAGATACTCTCCTATCTGACACCAAATACCTGGAGATGATTTATAGCATGTGCAAGAAGGTCCTGACAGGTGATCCAGGCGAGGACCCGGAGTGCCATGCAGTCAAGCTGCTGGAGGTGATCATCCTGCAGTGCAAAGGCCGTGGCATTGACCAGGTTGTGCCCTTGTTTGTGGCTGCTGCATTGGAGCGTTTGACACGGGAGGTGAAGACCAGCGAGCTAAGGACTATGTGCCTGCAGGTGGCTATCGCTGCACTTTACTACAGCCCCCCTCTTCTCCTCAACACTTTGGAGAACCTACGCTTTCCAAACAACACTGAGCCTATTACTAACCACTTCATCACCCAGTGGCTCAAAGATGTCGACTGCTTCCTTGGCCTCCACGACAGGAAGATGTGCATTCTCGGAATTTGTGCACTCATTGACCTCGAGCACAGGCCTCAAGTTGTCAACCAGGTAGCCGTCCAGCTTCTTCCAGCAGCCATCCTACTGTTCAATGGCCTCAAGAGGGCGTACGCCTGTCGAGCAGAGCATGAGAATGACGAcgacgatgatgatgaagatgggGAAGAGGATGACGACAATGCTGAGCTGGGCAGTGATGAGGATGACATTGATGAGGAAGGCCAGGAATACCTGGAGATGCTGGCGAAGCAGGCAGGAGAGGACGGAGACGATGAAGACTGGGAGGAGGACGATGCTGAGGAGACGGCACTTGAGGGCTACACTACagctgtagatgatgaagacaaCTTAGTGGACGAGTATCAGATCTTCAAAGCCATACTACAGAATATCCAGAGCCGTGACCCAGCATGGTACCAGGCACTAACGCAGGCCCTTGATGAAGATCAGGGCAAACACCTTCAGGACATTGGCACACTTGCAGACCAGAGACGGGCAGCACATGAATCCAAGATGATCGAGAAACACGGCGGGTACAAGTTCACAGCGCCAGTGGTGCCATCTACTTTCAACTTTGGAGGCACTGCTCCAGGAATGAATTGAGTCAtccgttcttctttttattACTCTGTGACTGATTGTAGTGAAGTGAAAAAAAGCTTGTGTTGTTCCCTTAAGTAGTGGTTCCCGAACTGGTTCTTCTCAGTCATTCTTCAATCTGTCAAATGGGAAATAAGCACCAGAAGATGTGGGAAAGCAACCAAAATGCAACCAATGGCTGGGGAAAACAAACCAAGAACTTGAGCACGATGCAAGAGAAGAAGCTCTGAACAACGTTGTCTTCTGGAGCCCAGTGTGGAGGGGATACCATGACGGCaactcttttgttttttttcccacttaaACAAATTTGGGGGATTAACAGTTAGAAATCGATAATGGgactaaatatttcattatcatTGTTGTGGCCTAATGGCCGTAATAAGATTATACCTCTGGTAGTGGTGATATCTACGTTATTTTCTGCATAAACAACACTCATGTTTATGAACATACAAGCCAAGGTTATTGATTTTTCAAGTAGCCTTGAAAAACAACCAGAGGCATTTCTAAGGTGTTAACAGCTGTATTCATATGTAGCATATTGGATACAACATAGCACTATGTGATGCCTGATCTCTGTAAATTAATGACTAGCACTTTCATATTGTTCAGGTCTTCTAGCCTTCTGTATCAGACtgcaaatttttttaaattgaagactatttaaaatgaaaacggCTGTAACTTTGTTACTTTGCAAGCGACTTCTGTAATTGCTGGTTGTCACCCATCTGGTTACAGAGTGGATCAGTGGGCAACTTGGAAACTATTGATTTCAGGAAAAAGAGAATGCTCTTGGTGTTCAGTATGGCTACAGGACATGTTTGTGAGCACTGAAAGTACAATTGAATACATCATTGAAGCATGTACAATTGGACTTATCGTGATGGTCTCAAGCTTTTGGTTGGTGTATGGATGAACCATCTATATATACAacaacatattaaaaaaaacaaaaactaaggGAA

Function

symbol description
ipo7 Predicted to be involved in protein import into nucleus. Predicted to act upstream of or within intracellular protein transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in cytosol and nuclear envelope. Orthologous to human IPO7 (importin 7).

NR:

description
importin-7-like

GO:

id name namespace
GO:0006886 intracellular protein transport biological_process
GO:0005634 nucleus cellular_component

KEGG:

id description
K20223 IPO7, RANBP7; importin-7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039795114.1 True 4212 mRNA 0.48 25 25184680 25200964

Neighbor

gene id symbol gene type direction distance location
tub tub,LOC102789439 coding upstream 396912 24738628 ~ 24787768 (+)
rras2 rras2 coding upstream 447627 24702857 ~ 24737053 (+)
copb1 copb1 coding upstream 484510 24688026 ~ 24700170 (+)
LOC120556334 LOC104919371,LOC103363468,LOC104965174,LOC102308327 coding upstream 562797 24617556 ~ 24621883 (+)
caprin1a LOC103356992,LOC104943339 coding upstream 962234 24206711 ~ 24222446 (+)
swap70a swap70,LOC104918979 coding downstream 1061 25202025 ~ 25215060 (+)
ampd3a LOC104930104 coding downstream 125282 25326246 ~ 25355853 (+)
adma NA coding downstream 132020 25332984 ~ 25335479 (+)
ctr9 ctr9 coding downstream 206637 25407601 ~ 25416786 (+)
btbd10b btbd10,LOC103362377 coding downstream 438565 25639529 ~ 25650613 (+)
G29685 NA non-coding upstream 85087 25098170 ~ 25099593 (+)
G29579 NA non-coding upstream 579482 24602982 ~ 24605198 (+)
G29535 nucb2,LOC103363466,LOC101472988,LOC102310665,LOC105916282,LOC101163155,LOC107085590 non-coding upstream 956764 24226851 ~ 24227916 (+)
G29477 NA non-coding upstream 1033925 24150510 ~ 24150755 (+)
G29460 NA non-coding upstream 1222348 23960107 ~ 23962332 (+)
G29747 NA non-coding downstream 20082 25221046 ~ 25221437 (+)
G29786 eif4g2,LOC102309340 non-coding downstream 216843 25417807 ~ 25420506 (+)
G29787 NA non-coding downstream 223945 25424909 ~ 25426358 (+)
G29790 NA non-coding downstream 236686 25437650 ~ 25437859 (+)
LOC120555818 NA non-coding downstream 241337 25442301 ~ 25446052 (+)
sox6 sox6,LOC103363464 other upstream 728992 24320064 ~ 24455688 (+)
plekha7b NA other upstream 870035 24235723 ~ 24314645 (+)
G29433 NA other upstream 1452209 23727012 ~ 23732471 (+)
igdcc3 igdcc3 other upstream 1667417 23443149 ~ 23517263 (+)
G29292 NA other upstream 2047653 23136732 ~ 23137027 (+)
pkd1l2a vat1l,pkd1l2,LOC102776808 other downstream 654875 25855839 ~ 25883360 (+)
nfat5b nfat5 other downstream 682490 25883454 ~ 25927726 (+)
LOC120556198 LOC103371916,LOC104965843 other downstream 2094793 27295757 ~ 27316181 (+)
nedd4a nedd4,LOC103371920,LOC102785817 other downstream 2117406 27318370 ~ 27351837 (+)
LOC120555577 NA other downstream 2208076 27409040 ~ 27410250 (+)

Expression


Co-expression Network