LOC120555949


Basic Information

Item Value
gene id LOC120555949
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 10741710 ~ 10745326 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039795169.1
tggtgttattgcgagaactatgactgaatgctttctatccacTATATACATGTGATATTTACTAAACAAACTGATGccagtgacaaagttccatttaaaaaactgTTTTGGACAACACGTGCTACCAGTTACACCATAAGAGCTATAAACTTTGCCgattgtgcagttcagcaggaacGCTGACTTCTCCCACTTTCACGTACGACTTTGAATGTAGCACCACAGTATTCACTCGGCAGTCAGCATGGCATCCGCTCCGCCAAGGCAACCCGATAGCGCCAGCACACAGGAGCAAATAAAAAGAGACCTTCTTCAGAGACTTCTAACTAAAATTTCCCAGGCCACACAGAGACTCCCGCTGGATGTGGACTATTTGAAGTTTGTGGTCAACCAGGAGATGGTCCTTTTTAGGGCATTGTCAGGCCAGGTTGAGATGCCACAAGAGGTTGTAAACGCATTGACAGAGCAGTCCATACTTGTCAATGCAGATGACAGCTCTAATATGAGCCGGTGCCAGGTGCCAGTGATGCAAGCAGAAATGGGACAGCCAAAATATGTTGTGTCTCCTCAGCAACTACAAAGCCTGGTAGAAATGTCTCTACCAGTGTATCATGTATTGCGAAACATCTGGGTGTATCTGTGAGGACAGTGAAACGGCGCATGCATGAATATGGACTTTCCATAATGCAGTGCTACAGTAACCTAACCGATGAACAACTAGATAATTTGCTGAGGTCGGTGAAGGCTAGGACACCACATGTAGGATGCAGAATGATGAAAGGAATCCTGCAGGCCATGGGTCACCGTGTCCAGTGGAACAGAGTGTATTCCTCCATGCAACGTGTAGACTCTGTTGGTGTACTCTCAAGAATGAAGGATGGGGTGTGTTgcaagaaggaaatattctgtcCAGGGTCCTCTGCACTTGGTGCATATCGACACAAACCATAAGCTCATCAGATATGGCCTTGTTATTTTTGGAGGGATTGATGGCTTCTCACGAAagATCATGTACCTTGGTGCTGCAACCAATAATAAAGCATCTACTGCACAGAAGTATGGCTTCCCATTAAGGGTGAGAGGTGACCAAGGAGTGGAAAACGTTGGCATAGCGCGATGCATGTTCACCATTAGGGGTTGTGGAAGGGGGAGTTTCCTATCAGGAAAGAGTGTACACAACCAAAGAATAGAACGTTTGTGGCGAGATGTTTGGATGACTGTTTCAAATGTGTACTACGAGATACTTCACAGCCTTGAGGATGAAGGTGTTCTAGACCCTTCTGATAGCATCCACCTCTTCTGTGCCCAGCATGTGTTTCTTACACGTCTGCAGAGGGATCTTGATGTCTTCAGGGTGGGGTGGGATAATCACCCTCTAAGAACAGAGCAGAATCTCTCCCCACAACAACTGTGGATGATGGGGCTTCTCCGGTATCCTGTTGATGCTCCAGACTTGGCAGAGGACATTGAGGATGCAGATCTTCATTTCAACACTGTCAGTGAGCAAGACGTGACCAGTCCTGGAGTGATTCTCCCACTCCATTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039795169.1 True 1546 mRNA 0.46 7 10741710 10745326

Neighbor

gene id symbol gene type direction distance location
LOC120555948 LOC103462314 coding upstream 132629 10527838 ~ 10609081 (+)
LOC120555947 hnrnpab,LOC100707314,LOC102779500,LOC101480042 coding upstream 256399 10484463 ~ 10485311 (+)
LOC120555943 LOC103372586 coding upstream 276156 10425163 ~ 10465554 (+)
lrrk1 lrrk1 coding upstream 645071 9861152 ~ 10096639 (+)
lins1 NA coding upstream 1098752 9632007 ~ 9642958 (+)
shcbp1 shcbp1,LOC104947898,LOC104967817 coding downstream 44519 10789845 ~ 10840149 (+)
minar1 kiaa1024,LOC107562943,LOC102799073 coding downstream 189307 10934633 ~ 11138398 (+)
LOC120555826 NA coding downstream 384595 11129921 ~ 11131472 (+)
LOC120556595 NA coding downstream 1286295 12031621 ~ 12031728 (+)
LOC120555527 NA coding downstream 1810721 12556047 ~ 12562553 (+)
LOC120556100 NA non-coding upstream 81135 10659569 ~ 10660575 (+)
G26530 NA non-coding upstream 262349 10479022 ~ 10479361 (+)
G26526 NA non-coding upstream 286098 10455401 ~ 10455612 (+)
G26512 NA non-coding upstream 356069 10385230 ~ 10385641 (+)
G26508 NA non-coding upstream 405328 10330691 ~ 10336382 (+)
G26605 NA non-coding downstream 25633 10770959 ~ 10771999 (+)
G26634 NA non-coding downstream 133616 10878942 ~ 10879304 (+)
G26636 NA non-coding downstream 155302 10900628 ~ 10900858 (+)
G26639 NA non-coding downstream 170386 10915712 ~ 10916142 (+)
G26711 NA non-coding downstream 431548 11176874 ~ 11177288 (+)
aldh1a3 aldh1a3,LOC106562593,LOC103357544,LOC104941118 other upstream 881710 9814697 ~ 9860000 (+)
asb7 asb7,LOC102792420 other upstream 1064683 9653578 ~ 9677027 (+)
adamts17 adamts17 other upstream 1137248 9391108 ~ 9604462 (+)
cers3a cers3,LOC102798777 other upstream 1363099 9333229 ~ 9378611 (+)
G26236 NA other upstream 1586367 9068729 ~ 9155343 (+)
lto1 oraov1 other downstream 1157946 11903272 ~ 11912722 (+)
G27086 NA other downstream 2364431 13109757 ~ 13110339 (+)
LOC120556202 NA other downstream 2489909 13235235 ~ 13237819 (+)
slc35c1 slc35c1 other downstream 2926151 13671477 ~ 13676613 (+)
lrrc4cb LOC104946080,LOC107396660,LOC103367510,LOC108234802,LOC101071141 other downstream 3064609 13809935 ~ 13856423 (+)

Expression


Co-expression Network