pdcd7


Basic Information

Item Value
gene id pdcd7
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 13240686 ~ 13248416 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039795200.1
atgtcaatggatcATACTATGTGATCATGCTGTctatcatggatgtattaagctGTCTTTGGATCATAATCATAGACCGTGATGGGAGCGGGAGGAAGGTGGGTTTTAAACGTAGGGAAGAAAATATCACCACTTCTCTCCGAATCGGTCATATTCTCAATTATTCATGATATAAATGAGGCAAACACCCAACTGGAAAATGCACACAATGTAACCAGACGGAAACATTTGAACACATAATACCAAACCCAGAGAAAGAAAGCACCTTACAGACACTAAAGAGAGAAAGCCTCCACAACAGCAGCCAAGGCATGTCAAACATTATTACGTTTTAAAGAGAAATGTAATAGTAAAGAGAATCccgttttttttattagttttctgtttgttttttctgcatttctctctcgttcacactccagtccagttggtggcggtaatgcgCCTGTAATTGGTTTGCCAACCGCCAATAAaccatgaagaagaagaaacggCAGAGACGACGGCAGCTTAATAATGCTCCTGTGAAGAGTTAAGAGAAAGAGTAAACTGTTTAGTATTGTACATAACGTAGATTCGGTGTATTCTTTTACGCGCCATGAACAACATGTATCAGCCCGCCTCGTCAGACACCCAGCCGCCTCCTGTCTATAGTGGCGGCTACAGCGCGAACAGAGCCCCGCCGAGCAGCACTCAGCCGGGCCACACTGCTCCACCGTGGACTCCTTCCCAGGGGTATGACGCTCACCCGTATGGGTTTAGGTGCGATTTTCCAGCACAGTCTCCCGGAGGAGGAAGTTTCGGAGGGCCCGGCTTAGCCCTTCCGTATGGATTTGACCCCTCCGTCCCCCCGCCTCCTTTCGGCTGTCCGCCGCCCGGACACTTCCCTAACATGGTTCCCAGCGCACCGGTAAACATATACAGCAGCAGGGGAGCGTTTCCCCAGCAGCTTAGACCCTGTCCTCAGTCTACAGGCTATGCCCCGGACTGTAGTCAGAAACAACAGCACCAGTATGAGGATTTCTCTGCGAGTGGAGCTCGGTTTCCTCCGCAGGGTAAAGATGACCGGATTCCTGAGGATGAAACGGTCCTTCAGAGGAGGCAGGATCAACAGTGGCTCGGACGCTTTCTACAAGATAGAGAACAAAACTCCAAGAGCCTACAGGCCCGGCACAAGACGCCACACAGCTCTGCCCCGGAGCTGAGAGCGGCTCCGTGCAGCTCTGCCCCGGAGCAGAGAGCGACCCCGTGCAGCTCTGCCCCGGAGCAGAGAGCGACCCCGTGCAGCTCTGCCCCGGAGCTGAGAGCGGCTCCGTGCAGCTCTGCCCCGGAGCAGAGAGCGGCTCCGTGCAGCTCTGCCCCGGAGCTGAGAGCGGCTCTGTACGGGGCAGCTCACATTGTCTCCCAGCTGGCAGAGTCCTGTGAAATTCTGAGGAACAACGTGGAGAATGAGTGTGTTTGGGCCAACTCTTATTTAAAGGCTTTACAGGTGAAGAGAGAGCTACAGGACAGACTGGCAGTCCTCGGTGCCAGTGAGTGTTTAGAGAGTTGGAAAACTAAAGTATGCCGTGTTGCTAAGAGGAGGGCCCGGCTCCGGAGAGCCAGGAGGGAGCTCCAGCTGGAGCAGACCCAGAGAGAGGAGCGCATCGCGGACAAAGAGGCTGCCATAAACACATGGAGGATGCAGCAGATCCGCCTAGTggaggaaaggaagaaggagcTGGAGCTGAAGCTGGCTGCAGACTCTGTTCTCTGCGAGGTGAGGAAGAAGCAGGCAGACGTGAAGAGGATGCAGGAAGTCCTGAGGTCTCTGGAGAAACTGCGCAAACTGAGGAAAGAGGCAGCGTCAAGAAAAGgtATCGTGACGGAGCGTTCCTGTGACGAGGCGTTCAGCAGCCGCCTGCAGCAGCTGAGCGctgtgatgaagaggaggacggCGGTGTACTCGGCCGAGGAGAAGGCTCTGATGGTGATGctggagggagagcaggaggaggagaggaggagagagcaggAGAAACGAGGGAAGAAGGAGCGGGAGAGACAGCTGCAGAGGAAACGCAGAGCGGACGCCATGATGTTTGGAGATGAGCTTCCTGCCGACTCTGTGCTGCAGCCCTTCAGACAGTATTACACCGAGGCCGAGCGCTCTCTGCACGCTCTGCTACATGTCAGgCGACAGTGGGATGCTTTTGTGGTTCCTGCGGATCATCCAGATGGTTCTCCGGTTCCTCAGGGTTGGGTTCTGCCTGAGGACCCATCAGACCAGGCCTGGGCCTCTGCTCTGCACACGGCCCACTCCGAGTGACACGGCCCACTTTGATCCAAGTGGCACGGCCCGCTCTGCGCTGAGTGGCACGGCCCACTCTGAGTGACTGTGATAACAGCCAGCAGCTGGCACACAGCTGGGAGGAGAAAGCCAGCTGAAGAAGACATGGAAATAAGACTTTAATGAGCAGAGAAGTTGATATTAGTTTTAATTGTTCCAAACCCTCTGTTGAACTTGAATAAGAAAATGAGATAATAAACAAGTGATGTGTTATTGTC

Function

NR:

description
PREDICTED: programmed cell death protein 7

GO: NA

KEGG:

id description
ko03040 Spliceosome

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039795200.1 True 2547 mRNA 0.54 5 13240686 13248416

Neighbor

gene id symbol gene type direction distance location
ubap1lb ubap1l,LOC107685210,LOC106932412,LOC103156499,LOC105938593 coding downstream 2434 13208329 ~ 13238252 (-)
rasl12 NA coding downstream 42050 13188414 ~ 13198636 (-)
vstm2b vstm2b coding downstream 747515 12489220 ~ 12493171 (-)
LOC120555959 NA coding downstream 1062015 12157744 ~ 12178671 (-)
ccnd1 ccnd1 coding downstream 1253759 11980178 ~ 11986927 (-)
LOC120555522 NA coding upstream 36825 13285241 ~ 13294261 (-)
LOC120556590 NA coding upstream 40794 13289210 ~ 13289264 (-)
chst1 chst1 coding upstream 153908 13402324 ~ 13406615 (-)
LOC120555520 NA coding upstream 475177 13723593 ~ 13727470 (-)
hsd17b12b hsd17b12,LOC103367509,LOC108234813,LOC106951467,LOC102212771 coding upstream 719298 13967714 ~ 13995315 (-)
G27108 NA non-coding downstream 69256 13170457 ~ 13171430 (-)
G27063 NA non-coding downstream 216601 13023855 ~ 13024085 (-)
G27062 NA non-coding downstream 217061 13023199 ~ 13023625 (-)
LOC120556265 LOC108249937,LOC106912228 non-coding downstream 254268 12984309 ~ 12986418 (-)
G27026 NA non-coding downstream 349393 12885852 ~ 12891293 (-)
G27133 NA non-coding upstream 328 13248744 ~ 13249163 (-)
G27135 NA non-coding upstream 1488 13249904 ~ 13250140 (-)
LOC120555270 NA non-coding upstream 130614 13379030 ~ 13391141 (-)
G27178 NA non-coding upstream 150587 13399003 ~ 13399374 (-)
G27189 NA non-coding upstream 372147 13620563 ~ 13620851 (-)
G27075 LOC104939823,LOC100707594 other downstream 144920 13069996 ~ 13095766 (-)
G26924 LOC108281047 other downstream 935862 12304539 ~ 12304824 (-)
G26891 NA other downstream 1278914 11960701 ~ 11961772 (-)
LOC120555651 NA other downstream 1571417 11643231 ~ 11669269 (-)
mtfmt mtfmt,LOC102776665,LOC102776373 other downstream 1730386 11476506 ~ 11510300 (-)
G27321 NA other upstream 1221342 14469758 ~ 14470345 (-)
LOC120556476 NA other upstream 1329611 14578027 ~ 14580011 (-)
G27420 NA other upstream 1594297 14842713 ~ 14843905 (-)
cfap70 LOC103368539,LOC102222702,LOC102790175,LOC102296598,LOC102204478,LOC104922799 other upstream 1802246 15050662 ~ 15078830 (-)
LOC120556162 znf609 other upstream 2823153 16071569 ~ 16159882 (-)

Expression


Co-expression Network