LOC120555999


Basic Information

Item Value
gene id LOC120555999
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 5816034 ~ 5854489 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039795269.1
GCTGACCGGTCTCCATTTCGCAGCGGACACTCAGACAACGCAGAGCCGCTCTCCGGACGAGCCGCGCCCGCTGTAGGACCCTCCTGTTCCCCGcaacttttctctctctttgtgcctGGTTCAGGCTGTTTATCCCCGCTGTAAGTATGAGTGTAGCGGTGGCAGAGGGCTGCTTTCTGTCCGCTCTGCAGCCCAACTCGTCCTGCACCGCCTATGGGCTTCCCTCGGACGGTATGTCTCCAGCCAGGAGGGTCCGAGAGCAAGTCCGGATGCGACTGGCTGAGAAGAAGTCCTCCTCCCTGCCCAGGCTGGACGACTCTCTGTTTGGATCAACAGACTACAGCTTTCCTGAGGCAAAGAGCTTTTCCCACAGCCACGGTTTCAGTTCCAGATCCATGATACACACACCCAGCCGCGTCATGGCTATGCCCACAGCACCCCTTCGCTCCGGTTTCTCCTCTCGCTCTGCTGTGGACAGCAGCTCCAAGGTGAGCCATAAAGCCTCCAGCACGGCCCAGAGCAGCTTTCGCTCCTTCCAGTCACAAAGCAGAAGCAGACGCTCCAAGTCACTGTGCCAAGCAGACCAGGAGGCCCTTCCTCTCACTGTGCTGCCTCCTCCAGAGAACGGCTCCTACATGATCACGGTGCCTCCCCCTGGCACCCTAAGGCGCAGCCTCAGCGGGACACTGGCCCAGGACAGAGGCTGCTGGCAGGCCGAGGAGCTGCCGTGTCAGTACACCTACAAAGGCCCGTCCCACCGCACCATCAGCAGAATCACCAaccgacagcagcagcagcagagctctgCCTTTGGCCAGGAGGGCTGGGTGGGGACTGGCAGGGGCGTCCCCATGGCAGGGGACGGCTGGGGGACACAGTGGCAGCAGCATGTGTCCAGGGCCAACCATGCCATGGGGACGGGCCAGTACCAAGCCCCTCTCCACCGGGCCGCCTCGCTCCGCAGTGTGAGGAGTGTCGGGAAAGGTGTGGATATCTTGGATGGAGCATCGATACACAGCAACGACCCACTGGAAGAtatgcaGAGTCTGGACATGGCTACAGCTGTCAGATATCTGTCTGAGTCCGATGATGCCTTGCAAGTTCTGGGAGCTGCATACATACAACACCAGTGTTACCATAGCAATGATGCCAAAAACCAGgtccgTGCTCTGCATGGCGTCCCAGCTCTTGTTCAGCTTTTCTCCAGTGACAGCCTAGAAGTGCAGCGCTTTGCCACCGGCGCCACGAGGAACCTCATCTACGAGAATGCTCAGAACAAGGCGGCACTCATCGACGCCGGCGGAGTGATGCGTCTGGTCAGCATCCTGAGCAAACCCGACGAGGAGCTTCGAAAGACCATCACAGGTGTCCTGTGGAATCTGTCCTCCAGAGACAACCTGAAGGAGAAGCTGTCCAAAGAAGCTTTATCAGAGCTGACAGAGAACGTACTCATCCCTCTGTGCAGCAGCATGCCACTCAGCCCGTCTGAGAAAGACATCTTCTACAACACCAGCGGCTGCCTCAGGAACTTGAGCTCAGTCAATGAGAGGACGAGACAGAAGATGAGAGACACGCGAGGCCTGGTGGACTCTCTGGTGTCCTACATTCAGCAAGCGGACAGGGCAGATGACAAGGGTTTGGAGAATTCATTGTGTGTGATGAGGAATCTGTCCTACCAGCTGTACACGGagcttcctccctctgtccgaCACCGTCTGGAGGGCCCAACGAGAGCCTCCGCCTCCAGGGACAGTGAGGCCATCGGCTGCTTTACTCTGTATAACAAAAAGCACACTGAGCGTAACCAGAATCTGTCCATATTGTCTGAGGTGTCCCGACAACCTAAGGGCTCCGAGTGGCTGTGGCACCCTAATGTGGTGGCGCTCTACAAGCTCGTTCTGCAGAACAGCGACAGCAGCTCCACCAGCCGCGAGGCTGCCATAGGTGCCCTACAAAATATCACTGCAGGGGAGGCCAGGTGGTCATCGGTACTGAGTGGTGTGGTGGTGGAGCAGGAGAGGATGCTGCCCATCCTGCTGGATCTGTTAGACACCAACAGTGACATGGAGCTGAGGTCTCTGACCGGCCTGCTGAGAAATCTGGCCAGGCACTCCACCAACAAAGACCACATGGCTAAGAGCATGGTGAACATTCTGGTGTCCAAGCTGCCCAGTGATGGCCTGCAGAAAACACCATCCAGCGAGGTGGTGGTCAACATCTGTGGAGCCCTCAATCACCTGGTCACCGGCAGTTCCTTGGCAGCCCGTGACATCTCATATTTCAACGGCTTGCCCAAACTGTTGGGCATCAAGACATCCCATGATAACAGCTCTGGGAGTCTAAAAGCTGCCAGAGCAGCCTCCACTGTCCTCTGCAACATGTTCCATTACAACAAACTGCACAAGGACTACAAACTGAAAGGATTTGCCAGACGAGACTTCACAGATGCCGCCATCTAGGCTGCAGCACATTACGTGATTCACCCTGAGCTTTCGACCTCAGGATCAAGGTTGCTGTGAGGAAAAAGACGAGGAACGACAGTTGAATTCACTGAGCAGATTATCTTACTGTGACGGACTTACAGGAAGAGAAAAATGGACTGGAGCCAATGGACTTAAACCGTGTCCTCTTTCAGGTGGCTGGCTGTGTGTTTAACTTGGCTTAGCTTGCACTAGATAGCCTGTGATGATGGGAATTTAACGGTTTCAACACACACAGTGGACTTCACCCCCAAATATACCGTTATGCTCTTTGACTGATATACTGATATGTTGTTTTGACACTGATTCCAATTTATTTTaaactaatgtttttttatagcTGATATATGATGCCCacactagagagagagagagagagagagagagagagagagagagagagagagagagagagagaggcttaaAGACATAGcaatgttggtcagtctgtccaCCCGTAGGTCCagactagggtgaccagacttCCCCGTTTTCCGGGGACAGTCCCCAGTTTTGGTGGCGTGTCCCCAGTTGGAGTTGTTTCCTTGGAAACATCCCCGTTTTAAACGACTGTGTGTTATAAACAGGCCGAAAAGTGAAATGATATCTTATGTGGCAAGACTGGGCAGCAGAGCCTACCAGTTGacatcttaaaggggtgatagaatgattatatagggtatttcacactgttccttatggtctcctaatggggtatgtaacactggttgggctgaaaatggcctggttgatattt

Function

GO: NA

KEGG:

id description
ko04610 Complement and coagulation cascades
ko04979 Cholesterol metabolism
ko05150 Staphylococcus aureus infection

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039795269.1 True 3237 mRNA 0.54 13 5816034 5854489

Neighbor

gene id symbol gene type direction distance location
LOC120556427 cd81,LOC103358449,LOC103379030 coding upstream 11212 5764543 ~ 5804822 (+)
LOC120556426 LOC102314239,LOC100696141,LOC102210596,LOC101484460,LOC106959120,LOC106925763,LOC103462259 coding upstream 57785 5733290 ~ 5758249 (+)
LOC120555666 LOC104921432,LOC104957830,LOC107086796,LOC103149206,LOC102794467,LOC102201791,LOC101480916,LOC102288651 coding upstream 144011 5659480 ~ 5672023 (+)
zgc:162297 LOC103355515 coding upstream 161779 5642283 ~ 5654255 (+)
LOC120555425 NA coding upstream 1474746 4333065 ~ 4341288 (+)
zgc:153993 NA coding downstream 14566 5869055 ~ 5884023 (+)
ano1a ano1 coding downstream 63067 5917556 ~ 6021420 (+)
fadd NA coding downstream 171946 6026435 ~ 6032154 (+)
trnal-uaa NA coding downstream 197398 6051887 ~ 6051969 (+)
trnal-uaa_1 NA coding downstream 198326 6052815 ~ 6052897 (+)
G25611 NA non-coding upstream 140046 5674366 ~ 5675988 (+)
G25593 NA non-coding upstream 183004 5630664 ~ 5633030 (+)
G25567 NA non-coding upstream 925038 4890727 ~ 4890996 (+)
G25541 NA non-coding upstream 1133564 4682124 ~ 4682470 (+)
G25498 NA non-coding upstream 1369120 4446595 ~ 4446914 (+)
G25663 NA non-coding downstream 8170 5862659 ~ 5862867 (+)
G25673 NA non-coding downstream 38232 5892721 ~ 5893025 (+)
G25675 NA non-coding downstream 56740 5911229 ~ 5912453 (+)
G25709 NA non-coding downstream 180967 6035456 ~ 6035789 (+)
G25710 NA non-coding downstream 182370 6036859 ~ 6037969 (+)
tshz3b tshz3 other upstream 978749 4793815 ~ 4837285 (+)
G25512 NA other upstream 1240389 4570373 ~ 4575645 (+)
G25431 NA other upstream 2030492 3784933 ~ 3785542 (+)
mmp15b mmp15,LOC104948393 other upstream 2297948 3481297 ~ 3518086 (+)
adamts18 adamts18 other upstream 3503877 2240414 ~ 2312157 (+)
G25708 NA other downstream 179720 6034209 ~ 6035193 (+)
LOC120555541 NA other downstream 407921 6262410 ~ 6289776 (+)
G25743 NA other downstream 432559 6287048 ~ 6288077 (+)
rwdd3 rwdd3 other downstream 528081 6382570 ~ 6395706 (+)
LOC120556365 LOC102793592,LOC103366350,LOC101487888,LOC102307622,LOC100694289 other downstream 1139467 6993956 ~ 7005678 (+)

Expression


Co-expression Network