cnep1r1 (cnep1r1,tm188,LOC106587574)


Basic Information

Item Value
gene id cnep1r1
gene name cnep1r1,tm188,LOC106587574
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 37136132 ~ 37141242 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039795280.1
GCTGAGCATGCAGCCAATGCGGATTGGCCTGTCGTTGAGCTGAGGGGAAGCAGTGGCACAGCCAACAGCACTGCAGGCTGGTGTGTGACCACCAGGCTCAGATATGAACTCCTTGGAACAGGCCGAAGACCTGAAGGCCTTTGAGAGAAGATTGACAGAGTATGTCTCCTGTTTGCAACCTGCAACAGGCAGGTGGAGAATGATTCTGATAGTTGTGTCTGTTTGTACGGCTACTGGAGCTTGGAACTGGTTAATAGACCCGGACACACAGAAGGTCTCTTTCTTTTCATCACTGTGGAATCATCCCTTCTTCACCATCAGCTGCATCACTCTTATAGCTCTCTTCTTTGCTGGGATACACAAACGAGTTGTGGCACCATCAATTATCGCTGCCCGCTGTCGGACAGTTTTAGCAGAATACAACATGTCCTGTGACGACACGGGGAAACTTATTCTCAAGCCACGACCGAACATCCAGTAACCACAAGCTTGAGTTTGAGCTTGAGCTTGAGTCAGCTGTACCTGGTCTTTGTTTATATAGCCACCAATCACTCAGTGTCTTGAGTCCTTTGGGTGGTCTGAACAGCACCAAGGGGAACAGCACTGAGACAGACATTGTCATCATGATGGAAATGCATTtggaagaaagaagaaatgaCCTGATAGGGCCTTTTAACAGTGTCACTGTTCTGATGTCAGGATTGAAGACAAGAGTTCAGTTGTGTTTATTTCTAATGTTGAGCATGTATTTTaactgtttctattttttaaaataatttacctAATAAATACTTCAGGTGTGAAACTGTC

Function

symbol description
cnep1r1 Predicted to be involved in positive regulation of protein dephosphorylation and positive regulation of triglyceride biosynthetic process. Predicted to act upstream of or within lipid metabolic process. Predicted to be located in nuclear membrane. Predicted to be part of Nem1-Spo7 phosphatase complex. Predicted to be active in cytoplasm. Orthologous to human CNEP1R1 (CTD nuclear envelope phosphatase 1 regulatory subunit 1).

NR:

description
PREDICTED: nuclear envelope phosphatase-regulatory subunit 1

GO:

id name namespace
GO:0035307 positive regulation of protein dephosphorylation biological_process
GO:0010867 positive regulation of triglyceride biosynthetic process biological_process
GO:0071595 Nem1-Spo7 phosphatase complex cellular_component
GO:0031965 nuclear membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005737 cytoplasm cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039795280.1 True 810 mRNA 0.45 6 37136132 37141242

Neighbor

gene id symbol gene type direction distance location
heatr3 heatr3,LOC103374091 coding downstream 138 37118149 ~ 37135994 (-)
tent4b papd5 coding downstream 19386 37083570 ~ 37116746 (-)
adcy7 NA coding downstream 52680 37011725 ~ 37083452 (-)
nkd1 nkd1 coding downstream 191290 36907900 ~ 36944842 (-)
fto fto,LOC102782469 coding downstream 989714 36026163 ~ 36146418 (-)
LOC120555740 NA coding upstream 4222 37145464 ~ 37148026 (-)
gpib gpi coding upstream 61759 37203001 ~ 37212398 (-)
lsm14ab lsm14a coding upstream 113348 37254590 ~ 37266353 (-)
LOC120556282 kctd15,LOC107099506 coding upstream 217368 37358610 ~ 37388820 (-)
LOC120556420 LOC104947065 coding upstream 269382 37410624 ~ 37584552 (-)
G32346 NA non-coding downstream 229991 36905700 ~ 36906141 (-)
G32345 NA non-coding downstream 230473 36904817 ~ 36905659 (-)
G32306 NA non-coding downstream 415585 36720332 ~ 36720547 (-)
G32273 NA non-coding downstream 824204 36311672 ~ 36311928 (-)
G32270 NA non-coding downstream 829868 36302485 ~ 36306264 (-)
G32404 NA non-coding upstream 44837 37186079 ~ 37188724 (-)
G32434 kiaa0355 non-coding upstream 102853 37244095 ~ 37282022 (-)
G32463 NA non-coding upstream 466399 37607641 ~ 37608413 (-)
LOC120555521 NA non-coding upstream 500401 37641643 ~ 37645301 (-)
G32469 NA non-coding upstream 559999 37701241 ~ 37701528 (-)
nod2 nod2 other downstream 244828 36883651 ~ 36891304 (-)
cylda cyld other downstream 253337 36859547 ~ 36882795 (-)
G31955 NA other downstream 2536591 34490660 ~ 34599541 (-)
LOC120555494 arpp19,LOC101481874,LOC103358163 other downstream 3319744 33806918 ~ 33816388 (-)
serf2 NA other downstream 3566753 33566371 ~ 33569379 (-)
ss18l2 ss18l2 other upstream 89899 37231141 ~ 37253426 (-)
LOC120556344 lrrc49,LOC102795887 other upstream 647483 37788725 ~ 37827271 (-)
slc6a5 slc6a5 other upstream 2064033 39205275 ~ 39235746 (-)
LOC120556511 LOC102208128,LOC101468289 other upstream 2908382 40049624 ~ 40142048 (-)
LOC120556146 NA other upstream 3422999 40564241 ~ 40589664 (-)

Expression


Co-expression Network