LOC120556010 (tollip)


Basic Information

Item Value
gene id LOC120556010
gene name tollip
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 11245752 ~ 11291530 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039795299.1
TGCCggaaacaagaagaagaagaagaagaagaacatccCTTCCGGGTCAGATCCAAGGAAACTAAATTTAGAGGTTCCTTGGTcaagttgttttttattataaatgaatggGTCAAGTCTAATCCGAGCAGCGGTCTAactaaacattttatttgttaagAACGCGTTTTTGATTAAAGAGGACTTGTGATAATCAACGCAAAGACACAACATGGCGACCACTATTAGCACTCAGCGGGGACAGGTGTATATTGGGGAGCTTCCCCAGGACTTCCTGAGGATCACTCcaactcagcagcagcagcaggtccaGCTGGACGCCCAGGCAGCCAGGCAGCTGCAGTTTGGAGGCTCAATAGGCACCGTAGGGCGACTCAGCATTACTGTTGTCCAGGCCAAGCTGGCTAAAAACTATGGTATGACTCGAATGGATCCGTACTGTAGGGTCCGACTGGGCTACGCAGTTTACGAAACACCAACTGCTCACAATGGAGCCAAGAACCCGCGCTGGAACAAGGTGATCCAGTGCACAGTGCCTCCTGGGGTGGACTCCTTCTACCTGGAGATCTTTGACGAGAGAGCGTTCTCCATGGACGACAGGATAGCATGGACTCATGTCACCATCCCTGAAGGCCTGAGGGAGGGCAGTGTGGTGGATGAGTGGTTCAGCCTAAGTGGCAGGCAGGGCGACGACAAGGAGGGCATGATCAACCTGGTGATGTCTTTTGCTTCCTTACCAGCAGGGATGATGACTCAGCCTGTGGTCCTAATGCCCTCTGTGTATCAGCAAGGAGTAGGATATGTGCCCATtgcagGAGTGCCTGCAGTCTACAACCAGGGCATGGTCCCCATGGCAATGCCAGCAGCCGTGCCAGCTGTTGGGGGCCAGGGGCCAGTGTGCAGTGAGGAGGACCTGAAGGCTCTGCAGGACATGTTCCCCAACCTGGATAAAGAGGTGGTTCGCACTGTGCTGGACGCACAGCAAGGCAACAAAGACGCTGCTATCAACTCTCTGCTGCAGATGGCTGAAGAGCTCTAACTCCAGAACACAAGCTTACAgcggggacacacacacacacacactgcagccaTACCTGAGCTCCCAGGCTCCCTGGTAGCCACATATATCTGTTTCCTCTCCCTTTATTGAATCCTGGTTGGCAGATGTATTTGGTAAAATCATGTCAGACTGATTTAGGTTTGTATCACTGTCTGTATTCCCAGGGTTTGATTTGCACTGTTTGAGTTATAGTGAGTCAAGTTCAGAGTCCATCTTCTGTTTATGTTAATACTGTTGTTACTAGTATGTGTACTTCTGCTGTTTCATATGTAGCTGGAAAAAGGAAAATGCATTCAGAATCTGATAAATTATTATGGCtatattaaattatatagaaTTGTATATGGTGATGGGAGAATTGTGAATTAACAAATGACCTGAGGGATTGAGGTGAGAACTGCCACGTCACACCACACTGAGTGAACTGATTCATGAAACCCATTTTTAATCACTGTAGTAAGAATGTCCAGGTTGTTTTAAAGTAATATCCTGTGGAGTATTTTTTGCAGAGAGATGCTTGAGAATGAAGATGTCCCTGTTATGATAAAATCTGGATGTTTTGAAGTTTGGCATGATGTTGTCTGTAGAGCTTTTGAGACCAAAACACTTTTATCCAAGTTGTCTACACACTTAGTGAAGACCTAAACAAAGTAATTCAGTCCACTTTTAATGAGCTTAATATCCACATATGTATTTATACATAATTTCTGCCCCCTGAGCAGTGAGGCCTAAGACAGTGATCTGATTTCCATATAATGTGCTCTGGATgttcatggtccccagaagCTGACtcataatgtttttgtttccttAACTTTACTATAGTGCCACCTTGAAGTAAAAGCTTGTGCATGAGGAAAATAAACTGATTTGTGGAGCTCTTTCATGCTTCATAGTTTGACTGCAGCTTCTAACACAGCAAGCAGAGCTTTACATGTTTAGTCTTCTTGTTTTTCAGCCacagtgtttgtatgtgttgtagTTCCTTTAGCTTTACATTGACACTTAGAGTTTACAAGGTCTTGATTCTAATGTGCTTTCTGCCAAAGGTTTCTTTTAAGAGTGTGATAGTTCTAACTTTTTACTTGTGATTCCAAAACTATCACTGTTGAAATTCTTAAAATGTCAGTCATTTTA

Function

symbol description
tollip Predicted to enable ubiquitin binding activity and ubiquitin conjugating enzyme binding activity. Acts upstream of or within negative regulation of Wnt signaling pathway. Predicted to be active in cytoplasm. Orthologous to human TOLLIP (toll interacting protein).

NR:

description
PREDICTED: toll-interacting protein

GO: NA

KEGG:

id description
K05402 TOLLIP; toll-interacting protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039795299.1 True 2197 mRNA 0.44 6 11245752 11291530

Neighbor

gene id symbol gene type direction distance location
LOC120555500 LOC107373152,LOC106943100,LOC106904307 coding downstream 24810 11207540 ~ 11220942 (-)
tssc4 NA coding downstream 455982 10766173 ~ 10789770 (-)
LOC120555515 NA coding downstream 495586 10745861 ~ 10750166 (-)
ano9b ano9,LOC103369658,LOC100691858,LOC102197938 coding downstream 513851 10640938 ~ 10731901 (-)
snrpa1 snrpa1 coding downstream 952828 10259231 ~ 10292924 (-)
LOC120555675 NA coding upstream 91970 11383500 ~ 11384371 (-)
celf1 celf1,LOC106561939,LOC106531342,LOC106587097 coding upstream 96147 11387677 ~ 11463360 (-)
c3h16orf87 LOC104939617,LOC103369653,LOC101078579,LOC101483362,LOC100690510 coding upstream 282503 11574033 ~ 11599622 (-)
vps35 vps35 coding upstream 315510 11607040 ~ 11636133 (-)
fgf19 fgf19 coding upstream 441911 11733441 ~ 11740920 (-)
G26737 NA non-coding downstream 19340 11225218 ~ 11226412 (-)
LOC120555566 NA non-coding downstream 61928 11183133 ~ 11183824 (-)
LOC120556158 NA non-coding downstream 78448 11165880 ~ 11167304 (-)
G26693 NA non-coding downstream 106427 11138734 ~ 11139325 (-)
G26675 NA non-coding downstream 239157 11006173 ~ 11006595 (-)
G26750 NA non-coding upstream 54098 11345628 ~ 11345871 (-)
G26785 NA non-coding upstream 179250 11470780 ~ 11471227 (-)
G26802 NA non-coding upstream 268038 11559568 ~ 11559895 (-)
G26804 NA non-coding upstream 272692 11564222 ~ 11564551 (-)
G26805 NA non-coding upstream 273154 11564684 ~ 11565380 (-)
G26298 NA other downstream 1949006 9295068 ~ 9296746 (-)
LOC120555589 cemip other downstream 2266608 8759601 ~ 8979144 (-)
tlnrd1 mesdc1 other downstream 2486944 8733419 ~ 8758808 (-)
il16 LOC102796330 other downstream 2548130 8630608 ~ 8697622 (-)
LOC120555934 NA other downstream 2749117 8494353 ~ 8496635 (-)
mtfmt mtfmt,LOC102776665,LOC102776373 other upstream 184976 11476506 ~ 11510300 (-)
LOC120555651 NA other upstream 351701 11643231 ~ 11669269 (-)
G26891 NA other upstream 669171 11960701 ~ 11961772 (-)
G26924 LOC108281047 other upstream 1013009 12304539 ~ 12304824 (-)
G27075 LOC104939823,LOC100707594 other upstream 1778466 13069996 ~ 13095766 (-)

Expression


Co-expression Network