fibinb (fibin,LOC103373419,LOC106523552)


Basic Information

Item Value
gene id fibinb
gene name fibin,LOC103373419,LOC106523552
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 14702979 ~ 14706234 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039795301.1
AGAGTAGCAGAGAGGTATTATTAGCCAAAAACCGAAGCGCGGCACTTGAGACATCCAGATGTTGCGTTTGAGGCACCAAGTGAAGTCGGGAGTACAACTTTTTCCACGCTGAAACCAACTTTAATACATCGCTTTTCCTGTTTACCAGCAGTAATGGAAACTGACAGGCTCGATTAAAGGAAGAGAAGTGAGGCTGTTAGAACACTTTCACGCCCTTTTTACCTGTTTGGACAAAAGGACAACAACAAAGCCTGAATTTAACTGCGCAGCTTTGACGTTTAAATCTGAttgaaatgtttgtgtttctaCGCCGGGTCGGAGTTAAATAGTCCACCAGGCTGACGCTGTCGCTAAAATAAACGTTTCAAACTTTAACATTTAATATCTGTCAGCGTGTTTGGGACAAGTGGGCATCATGGCTTTTCTTCACTTGCTCCTGTGTGCCGGGGTGTTATCACTGCCTATGTGTGGAGCCTTTTTCCGCGGACCCTTACAACCGGAGATGTCTAACGGCACTTTTCATCATTATTTCGTGCCGGACGGAGACTACGAGGACAACGACGACCCGGAGAAATGTCAGATGCTTTTCAAAATGACCGACGAGCGAAAGTGCGGTCTCGACGAGGACCAGGACGCCGTCATACGGGATGATTTCACTATCATCAAGAGGCAGATAGAGGACTCGGCCAGGGTGCTAGAGGGGATCGGGAAAAGCATCTCGTACGACCTGGACGGAGAGGACAGCTACGGGAAATACCTGCGGAGGGAGACGGCTCAGATAAGCGAGGCGTTTACAAACTCGGAGAAATCTCTGCTGGAGCTGGAGGTGAAATTCAAGCAGAGCCAGGAGAGCGAGCTAAAGGAGGAGCACCGGCTCAACGAAGACTTTCTGAACATGATTGTGCACACACGGGACGTCCTGAAGGACACGGTGGACATTTCTCTGGGACTGAAGGACAAGCACGAGCTCCTGTCTCTGATCATCCGCAGCCACGGCACGAGGCTGAGCAGACTGAAGAACGAATACATGAAGTTCTGAGAGAAAGTAGTTCCTACACGTCTCATTACagtacttttattattattattattattattattattattttcgtTATGGTGGAGTGTGTGACCATGAGGCAGAGGCAGGAGTTAAGCAATCTGAGCAGTCATATCAGGGATACAAACTACACTTAAAGGGCCAGTTCATCTAAATTAaatttataatattaaaatataaattcaaatataatacattttcgTGTTTAGCTCTAGAGCAGTGTTTTCCAACTTGGGTTTTCTTCCAAAGGGTCAAAAAGAAACCGTCTGAGGTCACAAGATGGTTAAGGGTTAGCTTGGTAAAAACTATTCTCTCATCTTTGCCgtttctttttgtaaaatactcaACAGTTCACCTTTTGATTGATGCTCAAAAGTATTCAAACTAAACGATCTGATCAGTTTTTTTAAGGGAAGTTGCTCACTGCTCACAGCTCATCAGTCCTACGTGATCCGTGAGGAGGTTGCAGGTAGCCTACAGTACACTTTGTTTCACTTTAAAGGGTCAGAGACAAAAACGTTTGGGATCCACTGCTCTAGAGGTATGTAGCCATGCACCTAGTTTGGGTTGAAATTGTCCAGGTTATGTGATAAATATCCAAAGCTGGATTACCAAACGGGCAAAGAAGGCAACTGCCCCAATGCCTGAGACTCCCTGAGAAACAAACAGTGGTCAATTCGTGGCAGAAATCTCTGAGGGATGAcataataattaattattattataattatttggcatataaaaccaaaactatcttTGTTGCTAGGAACTGCTGGTGGTAAAGTAAGAAAACGTgttgttttaaactttaaaaaaaaaaagtctgttggACTGTATCTGAcaccaacaattttttttaaatttataagACAATAAGGAGTGGGCAATATGGATAATATCCTCTTTCAGAGTAAATGCAATTTTATATGACGATATTGTCAAGCCAATTAAGAAATAGTTAAGGAATAAAATAACCAGAAagaaatgtctgtttttggCCGACCCAGCAAACTATATACCGAACAAATCAAAGTCCTTTATCATATTGATGCAAATAAAAATCCAATATTGCCATACAGTGGTCCTGCTCAGTGATTTGCCATGCACCCAGAGATATTAAAGAGCTACCGAGCTATAAACAGTATGGCATAATCTTTACACAAATATCACCTGACTGTGTGAATTGTCATATTGACCACTCCTAGAGACCCATGGTAATGGTCATTACAcaccatacaaacacacaacaaagtaaaaaatgtaTGGCAATAACGTTAGTTAACATCTGTCCGCCAATCAATGTGCCTCTTATGGCCATTTTTGGTAAGTGCATTGAATTTGACTGTACACAGTCacaggtttgtgtgtgcgtgttagtGTGGGTGTGCGTATGTGTAAAAACAACGGCTTCAAACATGAGTCGGCcaattaaaaaagtgaaaacagaAACTATCAGTTTTCATAACACTAGTACTGTAGTCAGTTTAAGGGTTTTCCAAAACCCATTCTGTCCTCTGTGACCAAAACAAACGGAGTGAGTAttggtataaaatatataaaaaaataattaaggaTTAAGTAGAATTTTGGACACATTGGACAGCTTATGTTTTAGTATCCATATTCACTGTAGTGAATGCTATGTGTTTGGTTTGATTTTTGACCCAAAAGTTGGATAAATGAGTTTTGGATAACTCTTCacatagggttagggttggggggTGGACCTTTTGTTGTCCAGATGAATGTTtttaagaatataaaaaaaatgtttacatattgacaCCTATGTTGTAATTTTTGCTTTATAGGCTTTGCACACTTCTTTTACTGTTCTGGTGCTAAAGTTTGTACCATGGTTTAAAAAGCAAGGCCTTTACTGTGCTGTTATGCACAGGCAGTATAATCTTGGAAAATGTACAGCGTATTGTTAGAAGTAAGTAAATACTGTGAGTGCCAATATCTTTATTACAAAATACCTTAATATGTATTCATTGTTTATATAAAGTTTTGAAATAGAGCTGCATATGTATCTAttcttgtttacctttttaAGATATGTGGTGAGATGTAATACATTGACAGATAAGACTGCAGGCAGCACTCATGGACTTCAATGTCAAAGACTAATCTGTGTGACAATATTCTTAACagattgtgtgttgtgtcttaAATAAAGCGTTTGTGTTTAAAGTAAAA

Function

symbol description
fibin Predicted to enable protein homodimerization activity. Predicted to act upstream of or within protein kinase C signaling; response to dexamethasone; and response to manganese ion. Predicted to be located in Golgi apparatus; endoplasmic reticulum; and extracellular region.

NR:

description
PREDICTED: fin bud initiation factor-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039795301.1 True 3256 mRNA 0.40 1 14702979 14706234

Neighbor

gene id symbol gene type direction distance location
luzp2 luzp2 coding upstream 239686 14283159 ~ 14463293 (+)
cdkn1ca NA coding upstream 608658 14092864 ~ 14094321 (+)
traf6 LOC103361723 coding upstream 647485 14048291 ~ 14055494 (+)
LOC120556255 apip,LOC102794906 coding upstream 937352 13750416 ~ 13765627 (+)
slc1a2a LOC104925837,LOC100698156,LOC102211357,LOC103366006,LOC104946114,LOC101471102 coding upstream 979914 13697646 ~ 13723065 (+)
LOC120555721 arl14ep,LOC102778030,LOC103375558 coding downstream 146051 14852285 ~ 14864789 (+)
ddb1 ddb1 coding downstream 373560 15079794 ~ 15154115 (+)
taldo1 taldo1,LOC102780893 coding downstream 655965 15362199 ~ 15374072 (+)
LOC120556051 NA coding downstream 667954 15374188 ~ 15392333 (+)
LOC120555952 LOC103368873 coding downstream 687550 15393784 ~ 15418775 (+)
G27356 NA non-coding upstream 18863 14683833 ~ 14684116 (+)
LOC120556358 NA non-coding upstream 125276 14574197 ~ 14577703 (+)
G27320 NA non-coding upstream 236299 14466478 ~ 14466680 (+)
G27306 NA non-coding upstream 478745 14223309 ~ 14224234 (+)
LOC120555409 NA non-coding upstream 701332 13997113 ~ 14001647 (+)
G27358 NA non-coding downstream 24583 14730817 ~ 14731646 (+)
G27432 NA non-coding downstream 251266 14957500 ~ 14957867 (+)
LOC120556117 NA non-coding downstream 293470 14999704 ~ 15000287 (+)
G27449 NA non-coding downstream 310350 15016584 ~ 15017505 (+)
G27459 NA non-coding downstream 355985 15062219 ~ 15065509 (+)
lrrc4cb LOC104946080,LOC107396660,LOC103367510,LOC108234802,LOC101071141 other upstream 846556 13809935 ~ 13856423 (+)
slc35c1 slc35c1 other upstream 1026366 13671477 ~ 13676613 (+)
LOC120556202 NA other upstream 1465160 13235235 ~ 13237819 (+)
G27086 NA other upstream 1592640 13109757 ~ 13110339 (+)
lto1 oraov1 other upstream 2790257 11903272 ~ 11912722 (+)
bbox1 bbox1,LOC102798250 other downstream 2328 14708562 ~ 14735176 (+)
kcna4 kcna4 other downstream 183156 14889390 ~ 14965062 (+)
LOC120556271 tmem138,LOC104922799,LOC102296598,LOC102204478,LOC104956289,LOC103368539,LOC102790175,LOC102222702 other downstream 341643 15047877 ~ 15053622 (+)
LOC120556433 psma4,psa4,LOC106562664 other downstream 735221 15441455 ~ 15446492 (+)
LOC120556001 rbpms2,LOC107381790,LOC103368877,LOC104957780 other downstream 768913 15475147 ~ 15486451 (+)

Expression


Co-expression Network