LOC120556031 (LOC103372833)


Basic Information

Item Value
gene id LOC120556031
gene name LOC103372833
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 46336294 ~ 46342517 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039795353.1
GAGCCATGGCCTTCCTTTGGATCCTCTCTTGCCTCGCCTTCGCCGGTACCGCCTATGGTTGCGGCACTCCCGCCATCCCTCCCGTCATCACTGGATACTCTCGTATCGTCAACGGTGAGGAGGCCGTGCCCCACTCCTGGCCCTGGCAGGTGTCCctgcagGACTACACCGGCTTCCACTTCTGCGGCGGCTCTCTGGTCAACGAGAACTGGGTGGTGACGGCCGCTCACTGCAACGTCAAGACGTCCCACCGTGTGATCCTCGGAGAACACGACCGCTCCTCCAACACCGAGAACATCCAGGTCATGACGGTCGCCCAGGTGTTCAAGCACCCGCGTTACAACGGCTTCACCATCAACAACGACATCCTGCTGGTGAAGCTGGCCAGCCCCGCCCAGATGAACATGCGTGTGTCTCCCGTGTGCGTGGCCGAGACCGGAGACAACTTCCCCGGAGGCATGAAGTGCGTGACCAGCGGCTGGGGCCTGACCCGCTACAACGcccCCGACACCCCCGCCCTTCTGCAGCAGGCCTCCCTCCCCCTGCTGACCAATGAGCAGTGCCGCGGTTACTGGGGCAACAAGATCACCGATCTGATGATCTGCGCTGGAGCGTCTGGAGCTTCTTCCTGCATGGGCGACTCTGGCGGCCCTCTGGTCTGCCAGAAGGCCGGCGCCTGGACTCTGGTCGGCATCGTGTCCTGGGGCAGCGGTACCTGCACTCCCACAATGCCCGGCGTGTACGCCCGCGTCACCGAGCTCCGCGCCTGGATGGACCAGACCATCGCCGCCAACTGAGCACCGATGGACCAGACCATCGCTGCCAACTGAGCGTCAATGGACTAGACCATCGCTGCCAACTGAGCGTCGATGGACCAGACCATCGCCGCCAACTGAGCGTCTCTTTGAACCTGATCATCAATAAAAGTCTGGAACTCAGAAA

Function

NR:

description
PREDICTED: chymotrypsin A-like

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0004252 serine-type endopeptidase activity molecular_function

KEGG:

id description
K01310 CTRB; chymotrypsin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039795353.1 True 942 mRNA 0.63 7 46336294 46342517

Neighbor

gene id symbol gene type direction distance location
LOC120556278 NA coding downstream 6718 46324410 ~ 46329576 (-)
LOC120555950 NA coding downstream 193030 46128800 ~ 46143264 (-)
LOC120556539 NA coding downstream 210598 46117224 ~ 46125696 (-)
LOC120555463 NA coding downstream 531663 45803287 ~ 45804631 (-)
LOC120555462 NA coding downstream 547591 45786996 ~ 45788703 (-)
LOC120555469 NA coding upstream 85596 46428113 ~ 46469487 (-)
tppp3 tppp3,LOC102289613,LOC100709027 coding upstream 237132 46579649 ~ 46586118 (-)
hsd11b2 NA coding upstream 303816 46646333 ~ 46692686 (-)
G34705 NA non-coding downstream 13717 46322304 ~ 46322577 (-)
G34694 NA non-coding downstream 86720 46249236 ~ 46249574 (-)
G34691 NA non-coding downstream 231830 46104070 ~ 46104464 (-)
LOC120556329 NA non-coding downstream 305197 46028585 ~ 46031097 (-)
G34677 NA non-coding downstream 320232 46014934 ~ 46016062 (-)
G34716 NA non-coding upstream 5356 46347873 ~ 46348282 (-)
G34717 NA non-coding upstream 6373 46348890 ~ 46349257 (-)
G34725 NA non-coding upstream 25876 46368393 ~ 46451340 (-)
G34792 NA non-coding upstream 164755 46507272 ~ 46530575 (-)
G34793 NA non-coding upstream 167734 46510251 ~ 46564157 (-)
vps13c vps13c other downstream 19270 46199704 ~ 46317024 (-)
LOC120555951 LOC104934393,LOC103372831 other downstream 151992 46144984 ~ 46184302 (-)
G34594 NA other downstream 478816 45854640 ~ 45857478 (-)
G34584 LOC108242767,LOC105923784,LOC108242778 other downstream 566506 45759488 ~ 45769788 (-)
G34617 NA other downstream 752627 45582497 ~ 45583667 (-)
G34718 NA other upstream 13002 46355519 ~ 46356020 (-)
G34812 NA other upstream 244538 46587055 ~ 46588046 (-)
zdhhc1 zdhhc1,LOC106532171,LOC107755028 other upstream 252455 46594972 ~ 46618637 (-)
LOC120556544 LOC106905454,LOC104943346,LOC107096264,LOC106938658 other upstream 472778 46815295 ~ 46823733 (-)

Expression


Co-expression Network