slc7a10a (LOC104919817,LOC103369274)


Basic Information

Item Value
gene id slc7a10a
gene name LOC104919817,LOC103369274
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 1789953 ~ 1817994 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039795363.1
TAAGATATTAAGGGCAGCCCGGGGAGTGGAGCTTGGTTCAGTCTACAGTATCTGGACCGGACCGAGGCGGGCAGAACGTATATATCTGTAAGGCGGAGGAGATGGAGgacaaagagaagaagaagaaggataaGAACTCCTCCAAGAACGACAGAGTCACTCTGAAAAAAGAAATTGGACTTTTGAGCGCTTGCGCTATTATCATCGGAAACATCATTGGCTCTGGAATATTCATCTCACCTAAAGGAGTGTTGGAGCATGCAGGCTCTGTGGGGCTGTCCCTTATCGTCTGGGTTTGTGGAGGGGGGATCTGTGCCCTTGGGTCCCTGTGCTACGCTGAACTGGGTGTCACCATCCCAAAGTCTGGAGGAGACTATTCATACGTGACAGAAATCTTTGGAGGGCTAGTGGGCTTCCTGTTGTTATGGAGTGCCGTCCTCATCATGTATCCGACCACGCTTGCTGTCATCGCGCTCACCTTTTCCAATTACGTCTTGCAGCCTGCCTTCCAGAACTGCCTGCCTCCGTTCATCGCCACCAGACTCCTCGCCACCATCTGTATCTTATTCCTGACCTGGGTGAACTGCTCAAGTGTGCGCTGGGCGACAAGGATCCAGGATGTTTTCACTGTAGGAAAACTGCTCGCTCTAGTACTCATCATAGTGGTAGGACTCGTCCAAATCTGTagagGTCACTACGATGCCCTACGGCCCAGTGTGGCGTTTGAATTCAGTCAGGATCCCTCTGTGGGACAGATAGCGCTGGCCTTCCTTCAGGCCTCCTTTGCCTACAGCGGATGGAATTTCCTCAACTATGTTACAGAGGAGATTGTGGAGCCACGCAAgaACCTCCCCCGTGCCATCTACATTTCCATCCCACTGGTGACCCTTGTCTACACTATGACCAACATTGCCTACTTTTCCTCCATGACCCCTGAGGAGCTGCTGGCCTCCAACGCTGTGGCAGTGACATTCGGCGAAAAGCTGCTGGGGATGTTTTCCTGGGTGATGCCGATCTCTGTAGCGCTGTCCACCTTTGGAGGAATCAACGGATATCTGTTCACCTCCTCCAGATTGTGTTTCTCTGGAGCCAGAGAGGGTCACCTGCCCTATCTGCTGGCTATGATCCACTTAAAGAACTGCACTCCAATCCCTGCCCTGCTGGTCTGCTGCATGGCCACCATAGTCATCCTGTGCATTGGAGAGACACACAACCTGATCAACTATGTGTCCTTTATCAACTATCTGTCCTATGGGGTAACCATTGCTGGCCTTCTCTACCTCCGCAAGAAGAGACCAAACCTGGTCAGACCCATCAAGGTAAGCATGTTGATCCCCATCACCTACTTGATATTCTGGGCTGTGCTGCTGGGCTTCAGTCTGTATTCTGAACCAGTGGTTTGTGGCCTGGGAATGGTCATCATGCTGACTGGAGTCCCTGTATACTTTGTGGGTGTTCAGTGGAAGAACAAACCCAAATGTGTAGACATGCTAGTCGAAAGAGTCACGTACATGGGCCAGAAGGTGTGTTATGTGGTGTTTCCTCAGGAAGACCCTTCAGAGACTGAACCCCTCACTGCCTCCAAAGCCATTGACTGAGCAGGGCAGTCAACCAGGAATTCCCTTTTTACATCAACACCTGCACTTCCAGTTTTTGCGCTACAATTTGTCACATCGGTCAGTTTGTTGATGGTGAAGAGATGGTTTCGTCCATGTTCTTGAACAGGTGCAGCCTGATTGGGGCTGCGATGAAGCTCCAGTATAAAATAATTGGGTGGTTAGGGCATTAGCTTGTTAAACCCTAAAGCTgcagaatgtttttattttttggacgGTACTGTTCCTCCATTCTCTTTACCAGTATGCCAAGTTTCCTCATTCATACATATCTTTATCTCATCTTCTCCCTTCTACTCACTCAAAGAACCTCCATCTGTCATCTTATGCTTCACTTCCAGGATATTCTTCTTTTACGACTTTAACAAAATCCTTGAGCTAATGTGCCTTAtgaaatgtatatatatttgtttagtGTATTGGTTTGTGCGGGTATTTTGATTGTGTAATAACTTTTTTGAGGTAAATATGCAAGCAGTTTCTGCACTTAGCAATATATCTTTATTACTGCTGCTACCTTCAGCTGTCTTTCACTAATTATTGTCGTGATGTTCACCGTTTGTCAACTGTGGATGAGGATTtttctgtctgtatctctgcCTGGCTACAGTATCTGGCCATTCTTTTTACTTTGCAATTCTTTATTATATCACTACCTTTTCCTGAAAGAGACTGTAGGTACcttcatattattattagagaGATTATCTACCCCACACCCATCGTTTCTAGCCACATTTATGGCACAGGAGAGACAAGAGGATGGCGGGAAGTTTGTGGCTGTCAGCTGGATGAAGGGCTGCATCATTACAACACGTCGACAGGCTGTTCTGCTTCCAAAAAATAATCTCATTTTTGGGAATGCCACTGTGAACTCTTTCAAAGTGCCTGACCTGCCAAGACAGTTGTTAGATTCCAGATGTTTTGACCTGATGTTATGATACAGAATCTGAAAAGGTTTATATTTAGGTTTATACAGTGCTTACCATTAACATATTGTCGAATAACATAACCAGAATCCATATTGACAGATAGATGGGTGGCTGGCAGTGGATGTTTACTTGTGCATTGGCCTGCTTCCACTTCCCCAAAAGCACATCATTACTGCAATTAGCCCTTGGCCCACTGACTTACTTTGGTACTATTGACATAATATAGTTGAATTGATTATTGTCCCATTGGCTTACTATGACCTTATGGACTTATTACAGCCCCACTAAAACTTGCCTCCAAATGATTATGGTCAGATTGATGTCCGTACTAGACTTGTGGTACCATTACACAGTATGTTAACTTACTGTGCTCCAGGTGATATGGGTGTTTACAAGTATTTAAGTAATCTCTGATAGCACTTGTCTATCAGCTGTTTATGTTGTACATAAAACGGAACAAGTGAAGGTTTGTGCCAGTGGACTTTTTAACATGATGTAAGCCAGCAGGTTGGAACTTTAATTGAATATACAGTCCTTTTCCAGGCCAGCAGATGCTAGGGATTTTCCCCTGCATCAAATCCACTAAAGAGACTCACACTTTTGAACAACAACAATGTCTGAGTGCCATGTCCAGGCGCTGTTAGCTCAGTTGAGATCTGTATATACtttgtaaagaagaagaaaaaactgttACAAATGCGCCAGGGACTCCTACAAAGATCACATTCCTCAGACATGTTGTGACACGCTTTGTGCACCTCTGTGTTTTGTAAAAGAGTGTGAAGTTGTACAagaataacaatgtaattactTATTAAATGTAGTTATATCTAA

Function

NR:

description
PREDICTED: asc-type amino acid transporter 1

GO:

id name namespace
GO:0003333 amino acid transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0015171 amino acid transmembrane transporter activity molecular_function

KEGG:

id description
K13782 SLC7A10, ASC1; solute carrier family 7 (D/L-type amino acid transporter), member 10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039795363.1 True 3382 mRNA 0.45 11 1789953 1817994

Neighbor

gene id symbol gene type direction distance location
zgc:165481 LOC103369239,LOC108241605,LOC103379234 coding upstream 91594 1674741 ~ 1698359 (+)
LOC120556440 LOC104962514,LOC103369193,LOC107381980,LOC106931206 coding upstream 404878 1378010 ~ 1385075 (+)
LOC120556244 LOC103369184,LOC102786692,LOC100700148,LOC101476567,LOC102297530 coding upstream 425227 1312448 ~ 1364726 (+)
LOC120555491 NA coding upstream 478193 1308822 ~ 1311760 (+)
LOC120555381 LOC102205592,LOC102787001,LOC102297232,LOC101476278,LOC100534518 coding upstream 520950 1262950 ~ 1269003 (+)
phkb phkb coding downstream 221469 2039463 ~ 2182754 (+)
LOC120555875 LOC103368003,LOC100711702 coding downstream 1405875 3223869 ~ 3236019 (+)
adgrg1 NA coding downstream 1432614 3250608 ~ 3273178 (+)
slc7a6 slc7a6,LOC104919890,LOC103355407,LOC102782072 coding downstream 1462082 3280076 ~ 3305488 (+)
LOC120555909 NA coding downstream 1603209 3421203 ~ 3422406 (+)
G25144 NA non-coding upstream 15513 1769282 ~ 1774440 (+)
G25008 NA non-coding upstream 374206 1413095 ~ 1415747 (+)
G25011 NA non-coding upstream 403689 1386048 ~ 1386264 (+)
G24991 NA non-coding upstream 487001 1302719 ~ 1302952 (+)
G24984 NA non-coding upstream 531137 1258519 ~ 1258816 (+)
G25203 NA non-coding downstream 364812 2182806 ~ 2183770 (+)
G25220 NA non-coding downstream 397253 2215247 ~ 2215548 (+)
G25237 NA non-coding downstream 496815 2314809 ~ 2316135 (+)
G25248 NA non-coding downstream 769878 2587872 ~ 2588152 (+)
G25249 NA non-coding downstream 770687 2588681 ~ 2611537 (+)
mapk8ip1b mapk8ip1,LOC102793463 other upstream 1705527 11843 ~ 84426 (+)
G25173 dnaja2,LOC106524269 other downstream 21339 1839333 ~ 1842811 (+)
G25204 NA other downstream 263964 2081958 ~ 2083319 (+)
adamts18 adamts18 other downstream 422420 2240414 ~ 2312157 (+)
mmp15b mmp15,LOC104948393 other downstream 1663303 3481297 ~ 3518086 (+)
G25431 NA other downstream 1966939 3784933 ~ 3785542 (+)

Expression


Co-expression Network