LOC120556047 (abcc12,LOC102304683,LOC101479372,LOC102203605)


Basic Information

Item Value
gene id LOC120556047
gene name abcc12,LOC102304683,LOC101479372,LOC102203605
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 1587544 ~ 1642348 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039795401.1
CCCCTCTTACGCCCTGTAGAGCCACCCTTGTGGTGTCGAAATTGTAgaaatttgtatttaaattttttttaaatacaaaaagagaaaggaaaaaaacatacaaaaatggTGTAGGTGTCATTTAATTTGctatgttttatattatatggGGGGGAGAGATGTTATGATATTTATATTAGTGTTCAGGTAGTGGACAGGGTCAGACTGAAGGGTCAGGGGGGAGTGGTTGTGTGCTGATTTAACCGGGACAGTCACAGGTGTGTGGGAGGATTGCGATTTTGGAGAAGGTTACCTCCAGCTGGGTAGCTGAGGTCGCTAGCTGAAGAACACTACTGAAGACAAAGGATTGGACGACCTGCTTGTTTCCCCCACCACAAACTTTTGTACACCATTTAAAAATCGGAACTGAGACAACAAAGGAGGAGCGGGGCTGGAACGCCGAAAGAACCAAGCCTATTAGGCAATGGAGTGGTTCCAGAGGCAGTCGTCTTCTCCTGAAACGCTAAACTATGCAGAGTCTGAGGACAAAATGATGAAAGGCTATTCTTTGGAGAAGATGGATACTCGAGGAGTCTCTTTTAACGAAGATAGTTTCCGACGGAGAACTGGATCTGTGGCCTCCAGTCCAGAACATACTGATTTGGACAACGGTGAAATAGCCTCCCCTACCCTATTCGGAAAATACCACCAGAGCCTTCAGACCCTCAAACCCTTCCGCTGgtcctcatcccaGTCCCACCCTTTGGACAATGCAGGTTTCCTGTCATTCACAACCTTTGCCTGGATGACCCCCATGATGTGGGCCTTGTTCAGGAATAAGCTGGACATGAGCTCTCTCAACCTGTCTACTTTGGATGTAGCCGAAACCAGCGGAGAAAGGCTCCACAGACTCTGGGAGGAAGAAGTGGCAAAGGTGGGCCTGGACAAGGCCTCTGTGTTTCGAGTGATCCTTCGCTTTCAAAGAACAAGGCTGATTCTGTCTGTCATTGTTGCTGTCCTTGCCATGATGGCATCTTTTCTGGGGCCGgCGGTTCTGGTCCATGAGATCCTAAAATATGTTGACGGCCCGGAGAAGTCCACAGTATTCCATGGTGTTGGTCTGTGCTTCGCTTTGTTCACATCAGATTTCTTCAAAGCCTTCTTCATATCCTTGATGTGGGCCTTGAACCTGCGCACTGCTGTCAGACTGAAGGGTGCCTACTCTACATTGGCCTTTCAGAAAGTCATCTCTCTGCGGATGCACAGCGGCATTTCAATGGGAGAGATTATTAGTGTTTTGACCAGCGATGGCCACAAATTATTTGAGGCAGTACTGTATGCAAGCTTCCTAATTGCCACCCCAGTGCTCTTTATTGTGTGTACCATCTATGCCTGCTACATTCTGGGCTATACCGCACTGACTGGAGTCTGCATCTACCTCATCTTCCTCCCTGTACAGATTGGCTTGGCCAAGCTCATTAACATATTCAGATGGAAAAGCATATCTATAACAGACAGCCGTGTTCGTACAGTGAATGAGATTCTCAGCAGCATCAAACTCATCAAGATGTACGCCTGGGAAGATTCCTTTGAGAAGAAGATCGCAGGCTTAAGGAAAAATGAGAAGAAGGAACTGCAGAGGACCAGTTACGTCCAGAATGCCAATAACAGCATCACCAGCATTGTCCCCGCCCTTGCCTGTATTCCCACCTTCATTGTACACACTATGTTGGGCTTGAAGCTCGACACGTCTGATGTCTTTACCACCATCGCTGTCTTCAACGCTATGAGGTTCTCCCTAGCTCTACTGCCCCTAATTGTAAAGTCCTTGGCTGATGCTGCTGTATCACTAGCAAGACTCAAGAAAATATTGGTGATCCAGAATCCAGAGAGCTACCTGATCCAGAAAAAAGACAGTGACTCAGCCATAGTGATGAAAAATGCTACGTTTTCCTGGAGCCAGCCAGAGTCCCCACCTAGCACAGCCAATGGGGTGAAGGGACACAAAGTGGAGGACTTGTCCCAGAATGGGAAGACTGAAACCTTGTCAACCCTGAGAAACATCTCCTTCACGCTGCCTAAGGGCAACCTGCTTGGTGTCTGTGGGAACGTGGGGAGTGGAAAGACGTCGCTGATTTCCAGCATTTTGGAACAGATGCACCTCCTGCGGGGCTCCCTCACAGCTGATGGGACATTTGCCTACGTTTCCCAGCAGGCTTGGATATTCCATGGAACTGTTCAAGAAAACATCCTGATGGAGGAACCCTTTGACCAGTCCAAATACAGCAGAGTTGTGGATGTCTGTAGCCTCAGAGCTGACCTGAACATCCTCCCATATGGTGATCAAACTGAGATTGGAGAGCGAGGGCTGAATCTGTCAGGGGGGCAGAAGCAGAGGATCAGCCTGGCCAGAGCGGTCTACTCCAAGAAGGACATCTTCCTTTTTGACGATCCACTATCTGCTGTCGATGCCCATGTGGGGAAACACATTTTTGAAGAATGCATTAAGAAGGAGCTCCAGGGAAAATCTGTCATACTGATTACACACCAGCTCCAGTATCTGGAGTACTGTGATGACATTTTAGTTCTGGAGGATGGCGAGGTGCTGGAGGCTGGGAACCACCGGGCCCTGATGAAAGCCAACGGACGCTACGCTCAGCTCATCAGCAACTACCAGATGGAACAGTCCCAAACTcagaatgaggaggaggaggaggaagtgtcACCCAAACACACTGCCCAGCTGAAGGATGTTGGGCTAAGAGAAAGCACAGACGGCGGTTTAGTGAACCCAGCATTTGACATGTCAGATGAACAGGATGATGGGACAACAGCTGACCAAAAATCTGCTGTCAGTGATCAGCTGGTCAGTCAGGAGTCTACCACAGAAGGTTCCATCTCCTGGAGAGTCTACCATCAATACTGCAAAGCAGCTGGAGGCTACATCGTCTGCTTCCTCGCCATCCTGAACATCTTCCTGATGATTGGCTCCACAGCCTTCAGCAACTGGTGGCTCAGCTTCTGGCTGGGGCAGGGTGATGGGTCATCCAATGGGACAACTTCAAACCAGGGCGACATCTCAGAAAACCCAGACCTGCACTTCTACCAACTTATTTATGGCGTGATGGGTGTTGTCACAGTTACACTTGCCATCATCACATGCTTCTTCTTCACTTGGGTCACCATGAAAGCATCCTGTAAACTCCACGACACAATGTTCACGAAGattttctcCAGTCCCATGAGTTTCTTTGACACAACGCCAACAGGCCGCATTCTCAACCGCTTCTCCAAAGATCAAGAGGAGGTGGACATCGCGCTTCCCCAAAACATGGACCCTTTCTTTCAGTTTAGCCTGCTGGTCACCTTCACCATTATCATCATCTCGGCTGTCTTCCCCGCCATGCTGGTAGCTGTGGTTGTTATGGGAGCTTTGTTCACCCTCATCCTCTTTATATTCCAGAGGAGTATCCGTCAGATGAAGAAGATGGAGAACATCAGTCGCTCTCCCTGCATCTCTCTCACCACCTCTACCCTGCAGGGCCTTAGCACCATCCATGCCTACAACTTAGAAGATAGCCACATTAAACTGTTCAAGTCACTGAATGACATCAACTCCAACTACTTTTTACTGTTTAACTCTGGAACACGTTGGCTCTCCTTCTGGCTGGACTTCATGGCTGCGACCATGTCCTTGTTGGTGTCTCTGTTCGTAGTGCTCAGCAGTAATGACTTCATCAATCCGGCTTTGAAAGGCTTGGCCATATCCTACACCACACAGCTGACAGGCATGCTTCAGTACGTAGTGAGGCAGTCGACGGAGGTGGAGGCCAGATTCAACTCGGTGGAGCGGCTGCAGGAATACATCACGGATTGTAAGCCTGAGGCTCCCAGACACATAAAGGAGGCTCAGGTCCCAAAGGACTGGCCAAAGAGTGGAACCATCACCTTCCAGGACTATAAGATGAGGTACAGAGAGAATACACCCATTGTCCTGAATGGGCTCAATTTTCTCATCAAAGCTGGAGAGAAGCTGGGCATTGTGGGAAGGACAGGCTCTGGGAAGTCCTCTTTAGGCGTGGCTCTGTTCAGGCTGGTGGAGCCAGCAGCAGGAACCATCCTGATAGATGGTGTGGACATTATGGACATTGGTCTGCAGGATCTGCGCAGCAAATTGTCTATCATCCCCCAGGATCCCGTTCTATTTATTGGAACAGTCCGATACAACTTAGACCCCTTCAATAGCTACAATGATGAGGAGATCTGGAAGGCACTGGAGAAGACCTACATGAAGGACTCAATCTCCAGACTGGAGGGGAAACTACAAGCACCGGTGCTGGAGAATGGGGAGAACTTCTCCGTAGGAGAAAGACAACTAATGTGTATGGCTAGAGCACTACTCCGCAACTCCAAGATCATTATATTGGATGAGGCAACGGCATCCATCGACTCAGAGACAGACGCCTTGATCCAGAACACCATCAAAGAAGCTTTCCAGGACTGCACCATGCTCACCATCGCCCATCGTATCAACACTGTGCTGCACGCAGATCGTATTCTGGTTATGGACAACGGAGAGGTGGCAGAGTTAGACCATCCAGATGTGCTGAAGCAAAGACCAGACTCTCTGTTCTCCTCACTGCTCACTGCTGCTAACACTGTGAACACCTGAACTAAAGAGGCCCCGTGGCAACACAGCACAACTACACACTAATAACTGTAACATAAGAATGCTTTCTATTATAATCTGGACTTGTGTGCTTATATCAGGTGTAGCTGAGCAGCAGAGATGGGGTTTAACATTCATGcagaaaaagacaacatttctatttttattttgtttttgggttgtctgtctgtcccattcttgtgaatGCGATATCTCAGGAACGCCTGAACAGAATTTCATTACATTTGGCCCAAACTGGCCATTTTGACTCAACGATGAACTGATTAAAATTTGGTGGTCAAAGGTCACTGTGActtaacataaaacatttttgccCATAACTCAAGAATTGCTACACTAATAATgacaacatttcacacaaatgtctaCTAGGATAAAGTGATGACATTTTGTACCCAAAAGGGCAAAGGTCAACTTCACAGTGACATCATAGTGTTctgcaaaaacacttttttggCCATTATTTAACAccataactcaggaacagaaggCGAGACATTTGGTCGgatactgaattggtgacactTAGGGCCCTATGTTGCACTCAgcacaattgcctttgtacaccgacgcatgtatcattcctattttgcacccgacgcacagcggacttttccc
>XR_005638786.1
ggTCACCCACCCCTCTTACGCCCTGTAGAGCCACCCTTGTGGTGTCGAAATTGTAgaaatttgtatttaaattttttttaaatacaaaaagagaaaggaaaaaaacatacaaaaatggTGTAGGTGTCATTTAATTTGctatgttttatattatatggGGGGGAGAGATGTTATGATATTTATATTAGTGTTCAGGTAGTGGACAGGGTCAGACTGAAGGGTCAGGGGGGAGTGGTTGTGTGCTGATTTAACCGGGACAGTCACAGGTGTGTGGGAGGATTGCGATTTTGGAGAAGGTTACCTCCAGCTGGGTAGCTGAGGTCGCTAGCTGAAGAACACTACTGAAGACAAAGGATTGGACGACCTGCTTGTTTCCCCCACCACAAACTTTTGTACACCATTTAAAAATCGGAACTGAGACAACAAAGGAGGAGCGGGGCTGGAACGCCGAAAGAACCAAGCCTATTAGGCAATGGAGTGGTTCCAGAGGCAGTCGTCTTCTCCTGAAACGCTAAACTATGCAGAGTCTGAGGACAAAATGATGAAAGGCTATTCTTTGGAGAAGATGGATACTCGAGGAGTCTCTTTTAACGAAGATAGTTTCCGACGGAGAACTGGATCTGTGGCCTCCAGTCCAGAACATACTGATTTGGACAACGGTGAAATAGCCTCCCCTACCCTATTCGGAAAATACCACCAGAGCCTTCAGACCCTCAAACCCTTCCGCTGgtcctcatcccaGTCCCACCCTTTGGACAATGCAGGTTTCCTGTCATTCACAACCTTTGCCTGGATGACCCCCATGATGTGGGCCTTGTTCAGGAATAAGCTGGACATGAGCTCTCTCAACCTGTCTACTTTGGATGTAGCCGAAACCAGCGGAGAAAGGCTCCACAGACTCTGGGAGGAAGAAGTGGCAAAGGTGGGCCTGGACAAGGCCTCTGTGTTTCGAGTGATCCTTCGCTTTCAAAGAACAAGGCTGATTCTGTCTGTCATTGTTGCTGTCCTTGCCATGATGGCATCTTTTCTGGGGCCGgCGGTTCTGGTCCATGAGATCCTAAAATATGTTGACGGCCCGGAGAAGTCCACAGTATTCCATGGTGTTGGTCTGTGCTTCGCTTTGTTCACATCAGATTTCTTCAAAGCCTTCTTCATATCCTTGATGTGGGCCTTGAACCTGCGCACTGCTGTCAGACTGAAGGGTGCCTACTCTACATTGGCCTTTCAGAAAGTCATCTCTCTGCGGATGCACAGCGGCATTTCAATGGGAGAGATTATTAGTGTTTTGACCAGCGATGGCCACAAATTATTTGAGGCAGTACTGTATGCAAGCTTCCTAATTGCCACCCCAGTGCTCTTTATTGTGTGTACCATCTATGCCTGCTACATTCTGGGCTATACCGCACTGACTGGAGTCTGCATCTACCTCATCTTCCTCCCTGTACAGATTGGCTTGGCCAAGCTCATTAACATATTCAGATGGAAAAGCATATCTATAACAGACAGCCGTGTTCGTACAGTGAATGAGATTCTCAGCAGCATCAAACTCATCAAGATGTACGCCTGGGAAGATTCCTTTGAGAAGAAGATCGCAGGCTTAAGGAAAAATGAGAAGAAGGAACTGCAGAGGACCAGTTACGTCCAGAATGCCAATAACAGCATCACCAGCATTGTCCCCGCCCTTGCCTGTATTCCCACCTTCATTGTACACACTATGTTGGGCTTGAAGCTCGACACGTCTGATGTCTTTACCACCATCGCTGTCTTCAACGCTATGAGGTTCTCCCTAGCTCTACTGCCCCTAATTGTAAAGTCCTTGGCTGATGCTGCTGTATCACTAGCAAGACTCAAGAAAATATTGGTGATCCAGAATCCAGAGAGCTACCTGATCCAGAAAAAAGACAGTGACTCAGCCATAGTGATGAAAAATGCTACGTTTTCCTGGAGCCAGCCAGAGTCCCCACCTAGCACAGCCAATGGGGTGAAGGGACACAAAGTGGAGGACTTGTCCCAGAATGGGAAGACTGAAACCTTGTCAACCCTGAGAAACATCTCCTTCACGCTGCCTAAGGGCAACCTGCTTGGTGTCTGTGGGAACGTGGGGAGTGGAAAGACGTCGCTGATTTCCAGCATTTTGGAACAGATGCACCTCCTGCGGGGCTCCCTCACAGCTGATGGGACATTTGCCTACGTTTCCCAGCAGGCTTGGATATTCCATGGAACTGTTCAAGAAAACATCCTGATGGAGGAACCCTTTGACCAGTCCAAATACAGCAGAGTTGTGGATGTCTGTAGCCTCAGAGCTGACCTGAACATCCTCCCATATGGTGATCAAACTGAGATTGGAGAGCGAGGGCTGAATCTGTCAGGGGGGCAGAAGCAGAGGATCAGCCTGGCCAGAGCGGTCTACTCCAAGAAGGACATCTTCCTTTTTGACGATCCACTATCTGCTGTCGATGCCCATGTGGGGAAACACATTTTTGAAGAATGCATTAAGAAGGAGCTCCAGGGAAAATCTGTCATACTGATTACACACCAGCTCCAGTATCTGGAGTACTGTGATGACATTTTAGTTCTGGAGGATGGCGAGGTGCTGGAGGCTGGGAACCACCGGGCCCTGATGAAAGCCAACGGACGCTACGCTCAGCTCATCAGCAACTACCAGATGGAACAGTCCCAAACTcagaatgaggaggaggaggaggaagtgtcACCCAAACACACTGCCCAGCTGAAGGATGTTGGGCTAAGAGAAAGCACAGACGGCGGTTTAGTGAACCCAGCATTTGACATGTCAGATGAACAGGATGATGGGACAACAGCTGACCAAAAATCTGCTGTCAGTGATCAGCTGGTCAGTCAGGAGTCTACCACAGAAGGTTCCATCTCCTGGAGAGTCTACCATCAATACTGCAAAGCAGCTGGAGGCTACATCGTCTGCTTCCTCGCCATCCTGAACATCTTCCTGATGATTGGCTCCACAGCCTTCAGCAACTGGTGGCTCAGCTTCTGGCTGGGGCAGGGTGATGGGTCATCCAATGGGACAACTTCAAACCAGGGCGACATCTCAGAAAACCCAGACCTGCACTTCTACCAACTTATTTATGGCGTGATGGGTGTTGTCACAGTTACACTTGCCATCATCACATGCTTCTTCTTCACTTGGGTCACCATGAAAGCATCCTGTAAACTCCACGACACAATGTTCACGAAGattttctcCAGTCCCATGAGTTTCTTTGACACAACGCCAACAGGCCGCATTCTCAACCGCTTCTCCAAAGATCAAGAGGAGGTGGACATCGCGCTTCCCCAAAACATGGACCCTTTCTTTCAGTTTAGCCTGCTGGTCACCTTCACCATTATCATCATCTCGGCTGTCTTCCCCGCCATGCTGGTAGCTGTGGTTGTTATGGGAGCTTTGTTCACCCTCATCCTCTTTATATTCCAGAGGAGTATCCGTCAGATGAAGAAGATGGAGAACATCAGTCGCTCTCCCTGCATCTCTCTCACCACCTCTACCCTGCAGGGCCTTAGCACCATCCATGCCTACAACTTAGAAGATAGCCACATTAAACTGTTCAAGTCACTGAATGACATCAACTCCAACTACTTTTTACTGTTTAACTCTGGAACACGTTGGCTCTCCTTCTGGCTGGACTTCATGGCTGCGACCATGTCCTTGTTGGTGTCTCTGTTCGTAGTGCTCAGCAGTAATGACTTCATCAATCCGGCTTTGAAAGGCTTGGCCATATCCTACACCACACAGCTGACAGGCATGCTTCAGTACGTAGTGAGGCAGTCGACGGAGGTGGAGGCCAGATTCAACTCGGTGGAGCGGCTGCAGGAATACATCACGGATTGTAAGCCTGAGGCTCCCAGACACATAAAGGAGGCTCAGGTCCCAAAGGACTGGCCAAAGAGTGGAACCATCACCTTCCAGGACTATAAGATGAGGGAAGTCCTCTTTAGGCGTGGCTCTGTTCAGGCTGGTGGAGCCAGCAGCAGGAACCATCCTGATAGATGGTGTGGACATTATGGACATTGGTCTGCAGGATCTGCGCAGCAAATTGTCTATCATCCCCCAGGATCCCGTTCTATTTATTGGAACAGTCCGATACAACTTAGACCCCTTCAATAGCTACAATGATGAGGAGATCTGGAAGGCACTGGAGAAGACCTACATGAAGGACTCAATCTCCAGACTGGAGGGGAAACTACAAGCACCGGTGCTGGAGAATGGGGAGAACTTCTCCGTAGGAGAAAGACAACTAATGTGTATGGCTAGAGCACTACTCCGCAACTCCAAG

Function

symbol description
abcc12 Predicted to enable ATPase-coupled transmembrane transporter activity. Predicted to be involved in transmembrane transport. Predicted to be integral component of membrane. Predicted to be active in membrane. Orthologous to several human genes including ABCC12 (ATP binding cassette subfamily C member 12).

NR:

description
PREDICTED: multidrug resistance-associated protein 9-like, partial

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0006200 obsolete ATP catabolic process biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005524 ATP binding molecular_function
GO:0042626 ATPase-coupled transmembrane transporter activity molecular_function

KEGG:

id description
K05672 ABCC12; ATP-binding cassette, subfamily C (CFTR/MRP), member 12

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039795401.1 True 5287 mRNA 0.48 31 1587544 1642339
XR_005638786.1 False 4310 transcript 0.49 29 1588886 1642348

Neighbor

gene id symbol gene type direction distance location
LOC120555617 NA coding downstream 79636 1459164 ~ 1507908 (-)
tdp1 tdp1 coding downstream 384462 1193040 ~ 1203082 (-)
LOC120556384 LOC104919714 coding downstream 396658 1176462 ~ 1190886 (-)
pdpr pdpr coding downstream 531250 1037755 ~ 1056294 (-)
mrpl46 mrpl46 coding downstream 557489 1021963 ~ 1030055 (-)
rhpn2 rhpn2 coding upstream 101844 1744192 ~ 1774421 (-)
lrp3 lrp3 coding upstream 176083 1818431 ~ 1831946 (-)
trnat-agu_3 NA coding upstream 190973 1833321 ~ 1833394 (-)
dnaja2a dnaja2 coding upstream 192740 1835088 ~ 1846922 (-)
LOC120556324 neto2 coding upstream 206506 1848854 ~ 1871276 (-)
G25039 NA non-coding downstream 129002 1458037 ~ 1458542 (-)
G24988 NA non-coding downstream 308727 1278569 ~ 1278817 (-)
G24987 LOC102205592,LOC101476278,LOC102787001,LOC102297232,LOC100534518,LOC101075605 non-coding downstream 320584 1266686 ~ 1266960 (-)
G24978 NA non-coding downstream 332920 1252718 ~ 1254624 (-)
G24974 NA non-coding downstream 344841 1240767 ~ 1242703 (-)
G25110 NA non-coding upstream 18146 1660494 ~ 1660735 (-)
G25111 NA non-coding upstream 18484 1660832 ~ 1661353 (-)
G25112 NA non-coding upstream 19011 1661359 ~ 1661697 (-)
G25113 NA non-coding upstream 19380 1661728 ~ 1662486 (-)
G25246 NA non-coding upstream 806079 2448427 ~ 2449619 (-)
LOC120556048 abcc12,LOC101479372,LOC101076737,LOC102203605,LOC100701509,LOC102304683 other downstream 31898 1510165 ~ 1555646 (-)
LOC120555898 mctp2 other downstream 130436 1410674 ~ 1457108 (-)
pnoca NA other downstream 482377 1061104 ~ 1105167 (-)
ntrk3b NA other downstream 665995 706157 ~ 921549 (-)
cep89 NA other upstream 22422 1664770 ~ 1740839 (-)
G25228 NA other upstream 633127 2275475 ~ 2277091 (-)
LOC120556425 ap2a2,LOC104921433,LOC104965011 other upstream 4037694 5680042 ~ 5717433 (-)
LOC120555534 LOC103369663 other upstream 4513874 6156222 ~ 6167529 (-)
ankdd1a ankdd1a other upstream 4680929 6323277 ~ 6346561 (-)

Expression


Co-expression Network