zgc:165481 (LOC103369239,LOC108241605,LOC103379234)


Basic Information

Item Value
gene id zgc:165481
gene name LOC103369239,LOC108241605,LOC103379234
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 1674741 ~ 1698359 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039795404.1
GAATCTCCCTCTGGTAAGAAGCTGTCCTCCCCTCTGCTGCCTCCTCCAACACTGCCAGTCTGGTTGACGCCTGCTTTCGGTACACctgacatacacatacacacagaggaaTGAGATGTGGACTGTTGCTATGAAGGAGGCAGATTTACATGAAGGACAGCGCAGCAGAGACAACTGGAGTGGAGGAGGGGGAGTCACACACATGGGGACGAGACCATGACTTGAAGATGAGCGGTTCTCAGGCTGAGTTAGAGGAGAAGGACTGTCCTCCACCAGAGGAATTAGAGTGTAAAATCTGTTACCAACGCTACAATGCCCACAAACGCAAGCCTAAGATCCTGGACTGCCTTCACCGGGTCTGTGCCCGCTGCCTCATTAAGATCCTGGACATTGCTGACGGGGCAGGCTTCGTGTCCTGCCCCTTTTGCCGACACCAAACCGAGATCACAGAGTACGAGGTGTCAGCCCTCCCTGATGATGCGATCATCATGTCCCACTTGGCAATGCGGGACAAATCCTGGAGCTCAGACCACAACAGGGAGGTGGTTTTGACTCCAACGGGTTTCTGCTCCTCCAGCCCATCTCAAGATTCCTCCAACTGCCTGGTCATCACTATAATGGAAGTGCAGAGGGACTCACAGCACTCCCCAAGCCGAAACGGCAGCTCTGACATCTATGCTGAGCAGAGCCTGGACTCAGTATCGATGGACTCCAATGGACAGGCTGATCAGGACGCTCTGTCCAAGTTCTGTAATCACGTCCCACGCATCCTGGTCTGGTTGCTGGGTTTCTTGTACTTTGGCTCACTGCCTCTAGGAATCTACTTGTTGGTGATCCAGAGAGTGACACTGGGTATTGTATGTGTTAGCTTGGTGCCATCAAGCCTGACAGTTTGCCTTGTCTATGGGTTCTGCCAGTGTCTGTGCCAGGGCATGTGTGACTGCTACTCCAGGGGCTGATAGGATGCTACATCAAAACTGGTGGTCCTAGGATGGGATAAAGTCAGCTGCAGTAAACAGGTTTTTGATGTGTTTTGTGAATAGATAGAGGGCCCAAAGGTAAAGATGATGCCACCTTCTACACAGTCTTTAAAAGCCTACCAGTCAACTATCTTCATGCAAATAATAGGCCAGTACAGAGACCTGAGACTGCCTTTAGATCTCAGAGCCCCTGACAATATGTGTTAGTTGGAGCAGCGCCTATACATTTCTGTAATGTATGTATACAACCTTTATTTgttctgtgctgtgtgtgaccTAGTCTAACATAACATTTGAAAGCAGACCTTTAACGTTTGACTTACATAACGACAGCACTGATAAGAGTCCtgggccctcatttatcaacactGGTACCAACATTCAATCTTTTTAAAGTGAAACGTGGGATTTACATTAACAGTCAGAGTACTTACTTGGTTTTCTCAGGATTTTCTTAAGTTAGTTAATAATTGCATTTAAGCATGACTGAATAATTGCGAGCTCCCAATAACAGAAAGGGAGGAAAATCAATGTTGTACGCGATTTTGGCCACCTGTTAAAATCAAAGGCACCTCTTAATTGATTGAGAGTACAAATGCaaaggtttatttttttcattaacttttattttaatgagAGTTCTTCACATCTATAAGCCAGCATTTATGGTAGAACTAAATGTTAGCAAAGATTTCTTCCATCTGTTAAAGCTACAGGTAAATCAAAGTTgaatatatgttctttattttatttttttattaataagtcTTTTGCAATGCTGGAATCAGTTGGAAGCCTTTGGAAGCTAGTGGGGGGATGTTGTCGTGGGACCGTGGTGCAGTTTGTTTATAGCCTAATGTTAGCTTTACACTCCTGGATTGCATTTATGCTTCTAAAATCATGAAAGTAGTGTCCATTTCTGAAGATTATCTTGCTGAACAAAACATGTTAGCATCATAAACCTTTGTTTGCCATAGAGCTTATTTTCTGCAATAACCCAAAATGAAAAAACCCTTGGCACTTTCGGTTTGGCCTCCAAAAACACTTCTTCCCTGCATCACTCTATGACTACtgacaaacaaagaaaacatacaGGCTACACCCTGATTGGACAAGTGCTTTCACTCGCTTACTGCTCCCGGATTTCAAACAGACCAACAGCTAATTTGGAAACATACTTttatattacaaaacaattcaCCTAAATGTAAAGGCAGCCCGATCAGGCTCCGAGATGACGTTATCTTCTGCCTAGAAGTGATAaatttacagctcacagcaacttaatatgATATAGTCTCTGGCATTTGATATTGAGTGTCTGTGAAAAATGTTGGTGCACATTTATGATACATCGTTAGCATGCATTAGCTCGGAGGACTAATTTGGCTTGGTTACTATATAACGTGAACGTCACAGTCACCCTGAACATCACGCTCAACCTAGTTAAACAATCTAGCAGTTCAACAAAGCATTGCTTTCAGGTAAAGCCCTAACTGCTTATTTTATGTGTCAcacttgttctctctctctccatctctctctgtctttctctctcaatgcctcaaatacagacacacaccatacaGAGTTGTGTTGAATGGATGTGGTGCATCTGAGGTATACACGAGACTCATATCTCAGGTTTTTTGATACTCCATTAATGTTAAGCAACACACTTTCCATTCAGTTTCTTGTTGAGTTGAACATAGCAAGGCTgctctgttgtttttatttattttgtggtACTGGTTGTGAAAAGCTCATTGAACTCAAAAGCACGGATTGTGGCTATGGGAGTCCTCTGTTACTTTCATGCTGTAAGTCACATGCACATTCTGCCATACTAAAGCCATGcagatttgttgttgtgtgGCATCTCAAGGTTGTGAGCATTATTTATGTGGCATtttgattttcatttacatgtaaGACAAACACTCTCCTACAAGTACCATCCTGGCATATGGACTCCTGAAAGAAAGGTCACAATTaactatgtgtgtatttgtatgtatatgtgttattTTAACAATTATAATTGTTTTTATGTGACAAATGCTTTGCTGAGTACAGCACATGTATGTagagaaaaaaagttattttgatCAAGTCTGCTGAAGATTTAGGTTTATTCTATGGATTCCAAAAAGCATATGACCAAAACATACATTTAGTGGGTCAAAAGTTTGTCTTTTAAAACATCTTGAACTGCAGTCCTACCCAGCAATGAGTGACATACCCAGCGCTACTTAAAGGAAAGCTTTAGACCATAGATTGAGAGTTTAATTACTGTTCATAAGCATGGTGGTTAAGAATTTTTGGGTTTTATCAATTCACATTACTTTTGGGAGAGGTTGAAACTATTACGCACATTTGGCAATTACCAACTTTCTTTTACTCACAAGCATTCTACACTTCATCATCTTCTAGTAGTCCATTTAGAACCTTTTCTGTACAATGTTGACAACCGAGGGCCCTGGGCTGATAACTTTGAGTGTATTTAATGATAAACTACAGGTAATGATATTTCTCATCAAAATGGATACTGTATGTAGCATTTTGAAAAGAATATTAATTTTATGCTTTACCCTTCCTCTACAATGTAAGTCCTGTTCCTTCTGTGAtgttatattctatatattctttTCTTACCTTTCCATTGTCAACTTCTTTCTACTGCTGTTTCTATGCCCACACCCTCtgttttctgtgtctctgtctatgaTTAACTGACTGCAGCTCTCAGCTTAGTGCCACACCACAGATTACAGAAGCTACTAGACAATGAAATAAATGGAGAATTATTTTCTA

Function

NR:

description
PREDICTED: E3 ubiquitin-protein ligase RNF182-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039795404.1 True 3794 mRNA 0.41 2 1674741 1698359

Neighbor

gene id symbol gene type direction distance location
LOC120556440 LOC104962514,LOC103369193,LOC107381980,LOC106931206 coding upstream 289666 1378010 ~ 1385075 (+)
LOC120556244 LOC103369184,LOC102786692,LOC100700148,LOC101476567,LOC102297530 coding upstream 310015 1312448 ~ 1364726 (+)
LOC120555491 NA coding upstream 362981 1308822 ~ 1311760 (+)
LOC120555381 LOC102205592,LOC102787001,LOC102297232,LOC101476278,LOC100534518 coding upstream 405738 1262950 ~ 1269003 (+)
LOC120555232 NA coding upstream 422840 1246885 ~ 1251901 (+)
slc7a10a LOC104919817,LOC103369274 coding downstream 91594 1789953 ~ 1817994 (+)
phkb phkb coding downstream 341104 2039463 ~ 2182754 (+)
LOC120555875 LOC103368003,LOC100711702 coding downstream 1525510 3223869 ~ 3236019 (+)
adgrg1 NA coding downstream 1552249 3250608 ~ 3273178 (+)
slc7a6 slc7a6,LOC104919890,LOC103355407,LOC102782072 coding downstream 1581717 3280076 ~ 3305488 (+)
G25008 NA non-coding upstream 258994 1413095 ~ 1415747 (+)
G25011 NA non-coding upstream 288477 1386048 ~ 1386264 (+)
G24991 NA non-coding upstream 371789 1302719 ~ 1302952 (+)
G24984 NA non-coding upstream 415925 1258519 ~ 1258816 (+)
G24972 NA non-coding upstream 420150 1253197 ~ 1254591 (+)
G25144 NA non-coding downstream 70923 1769282 ~ 1774440 (+)
G25203 NA non-coding downstream 484447 2182806 ~ 2183770 (+)
G25220 NA non-coding downstream 516888 2215247 ~ 2215548 (+)
G25237 NA non-coding downstream 616450 2314809 ~ 2316135 (+)
G25248 NA non-coding downstream 889513 2587872 ~ 2588152 (+)
mapk8ip1b mapk8ip1,LOC102793463 other upstream 1590315 11843 ~ 84426 (+)
G25173 dnaja2,LOC106524269 other downstream 140974 1839333 ~ 1842811 (+)
G25204 NA other downstream 383599 2081958 ~ 2083319 (+)
adamts18 adamts18 other downstream 542055 2240414 ~ 2312157 (+)
mmp15b mmp15,LOC104948393 other downstream 1782938 3481297 ~ 3518086 (+)
G25431 NA other downstream 2086574 3784933 ~ 3785542 (+)

Expression


Co-expression Network