taldo1 (taldo1,LOC102780893)


Basic Information

Item Value
gene id taldo1
gene name taldo1,LOC102780893
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 15362199 ~ 15374072 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039795410.1
GCGCTCCCGTCTCTCTGACATTCCGCCTGCTCTCACGTGTTTTCTGTGTATAAAAGGGTCCCAGTCTCTCATCATGTCTACTGTGTCACCAGACAAACGGCGAAAAATGGAGTCAGCGctgaaccagctgaggaaacacaCTGTGGTGGTGGCAGACACCGGGGATTTTAACGCCATTGACGAGTACAAGCCACAAGATGCCACCACTAACCCTTCTCTTATCCTGGCTGCTGCCAAGATgcctgcctaccagcacctgtTGGATCAGGCCATTAAATACGGCATCGCCAAAGGCGGAACTGAAGAGGAGCAGGTCGCCAACACAATGGACAAGCTGTTTGTGACTTTCGGGCTAGAGATCCTCAAGAAGGTCCCAGGCAGAGTCTCTACTGAGGTGGATGCCAGGCTATCTTTCGATAAAGATGAAATGGTCGCCAAGGCCCTGAGGTTCATCGCTCTCTACAAAGAAGCAGGCATTGACAAGGAGCGTGTGCTCATCAAGCTGTCATCCACATGGGAAGGAATCCAGGCTGGCAGggAACTCGAGGAGAAGCACGGCGTTCACTGCAACATGACCCTGCTGTTCTCTTTTGCTCAGGCTGTGGCCTGTGCAGAAGGAAAGGTAACACTTATATCACCCTTCGTTGGACGCATCCTCGACTGGCACAAGGAGAATACAGGCCGCACAAGCTACGAGCCCCACGAAGACCCAGGTGTGCTGAGTGTGACCAAGATTTACAACTACTACAAGAAGTTTGGCTACAGCACGGTGGTGATGGGCGCCTCCTTCAGAAACACGGGGGAAGTGAAAGCCCTGGCAGGCTGTGATCTGCTCACCATCTCCCCTGGGCTGCTAGCGGAGCTAAGCCAGGACCACAGCACCGTCACAGAGATGCTCAATGTAGAGAAAGccaaGGCCTGTGATCTGGAGAAGATCCACCTAGATGAGAAGGATTTCCGCTGGCAGCACAATGAGGACCGCATGGCCGTGGAGAAACTGTCTGACGGCATCCGCAAGTTCGCTGCTGATGCCATCAAGCTGGAGACCATGATCAAAgAGAAAATTCTCAATGTTAAAAACGGCCAGTAGTTAACAGATTTGGCATCTCCGGCGGCATCGACAGGAAGTATATAAGGAGTTATCGGGCTGCCTTCCTTTTTCAAACTACCTGAAAGAAGGTCCAGAGCACTAGGCCTTCCCTCTCCTAATCTGACCAAACTCCAGGGACCCTTCTCCTGAATGGACACCTTTCCTCTGTTTAGGCTGGGATTAACTCTCGTCTGTCTTCTGACCAAACATACATGGTGATTGATGCTAATGTTGGTGTGGAGTTGACGTGAAATAGTCTTAATATTTACTAGAAATTTGACCAGAAAAGGGTAAAAAACGTTTAATGTCTTAATTAGTTTTGGTATTGCTGAGTAATATCATGTGACTGCTGGAAAGGACCATGGGCACTTTTTTGGCAGGAAAGGACCACAATTGTCAACACCATTTGGATGGGGGTTGAGGGTAGAGCTTGATAAAGACCATTGTACCATCATTCCTCAGAATATAATCTTTTGCTTTTTCAATGAATAAAAATCTCTGTCAataaa
>XM_039795411.1
CGCGCTCCCGTCTCTCTGACATTCCGCCTGCTCTCACGTGTTTTCTGTGTATAAAAGGGTCCCAGTCTCTCATCATGTCTACTGTGTCACCAGACAAACGGCGAAAAATGGAGTCAGCGctgaaccagctgaggaaacacaCTGTGGTGGTGGCAGACACCGGGGATTTTAACGCCATTGACGAGTACAAGCCACAAGATGCCACCACTAACCCTTCTCTTATCCTGGCTGCTGCCAAGATgcctgcctaccagcacctgtTGGATCAGGCCATTAAATACGGCATCGCCAAAGGCGGAACTGAAGAGGAGCAGGTCGCCAACACAATGGACAAGCTGTTTGTGACTTTCGGGCTAGAGATCCTCAAGAAGGTCCCAGGCAGAGTCTCTACTGAGGTGGATGCCAGGCTATCTTTCGATAAAGATGAAATGGTCGCCAAGGCCCTGAGGTTCATCGCTCTCTACAAAGAAGCAGGCATTGACAAGGAGCGTGTGCTCATCAAGCTGTCATCCACATGGGAAGGAATCCAGGCTGGCAGggAACTCGAGGAGAAGCACGGCGTTCACTGCAACATGACCCTGCTGTTCTCTTTTGCTCAGGCTGTGGCCTGTGCAGAAGGAAAGGTAACACTTATATCACCCTTCGTTGGACGCATCCTCGACTGGCACAAGGAGAATACAGGCCGCACAAGCTACGAGCCCCACGAAGACCCAGGTGTGCTGAGTGTGACCAAGATTTACAACTACTACAAGAAGTTTGGCTACAGCACGGTGGTGATGGGCGCCTCCTTCAGAAACACGGGGGAAGTGAAAGCCCTGGCAGGCTGTGATCTGCTCACCATCTCCCCTGGGCTGCTAGCGGAGCTAAGCCAGGACCACAGCACCGTCACAGAGATGCTCAATGTAGAGAAAGccaaGGCCTGTGATCTGGAGAAGATCCACCTAGATGAGAAGGATTTCCGCTGGCAGCACAATGAGGACCGCATGGCCGTGGAGAAACTGTCTGACGGCATCCGCAAGTTCGCTGCTGATGCCATCAAGCTGGAGACCATGATCAAAgAGAAAATTCTCAATGTTAAAAACGGCCAGTAGTTAACAGATTTGGCATCTCCTAATCTGACCAAACTCCAGGGACCCTTCTCCTGAATGGACACCTTTCCTCTGTTTAGGCTGGGATTAACTCTCGTCTGTCTTCTGACCAAACATACATGGTGATTGATGCTAATGTTGGTGTGGAGTTGACGTGAAATAGTCTTAATATTTACTAGAAATTTGACCAGAAAAGGGTAAAAAACGTTTAATGTCTTAATTAGTTTTGGTATTGCTGAGTAATATCATGTGACTGCTGGAAAGGACCATGGGCACTTTTTTGGCAGGAAAGGACCACAATTGTCAACACCATTTGGATGGGGGTTGAGGGTAGAGCTTGATAAAGACCATTGTACCATCATTCCTCAGAATATAATCTTTTGCTTTTTCAATGAATAAAAATCTCTGTCAataaa

Function

symbol description
taldo1 Predicted to enable transaldolase activity. Predicted to be involved in pentose-phosphate shunt, non-oxidative branch. Predicted to act upstream of or within carbohydrate metabolic process and pentose-phosphate shunt. Predicted to be located in cytoplasm. Human ortholog(s) of this gene implicated in carbohydrate metabolic disorder. Orthologous to human TALDO1 (transaldolase 1).

NR:

description
PREDICTED: transaldolase

GO:

id name namespace
GO:0006098 pentose-phosphate shunt biological_process
GO:0005737 cytoplasm cellular_component
GO:0004801 sedoheptulose-7-phosphate molecular_function

KEGG:

id description
K00616 E2.2.1.2, talA, talB; transaldolase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039795410.1 True 1599 mRNA 0.49 8 15362200 15374072
XM_039795411.1 False 1504 mRNA 0.49 9 15362199 15374072

Neighbor

gene id symbol gene type direction distance location
ddb1 ddb1 coding upstream 208084 15079794 ~ 15154115 (+)
LOC120555721 arl14ep,LOC102778030,LOC103375558 coding upstream 497410 14852285 ~ 14864789 (+)
fibinb fibin,LOC103373419,LOC106523552 coding upstream 655965 14702979 ~ 14706234 (+)
luzp2 luzp2 coding upstream 898906 14283159 ~ 14463293 (+)
cdkn1ca NA coding upstream 1267878 14092864 ~ 14094321 (+)
LOC120556051 NA coding downstream 116 15374188 ~ 15392333 (+)
LOC120555952 LOC103368873 coding downstream 19712 15393784 ~ 15418775 (+)
cpeb1b cpeb1 coding downstream 116327 15490399 ~ 15504450 (+)
senp8 senp8,LOC103374590,LOC103374606 coding downstream 644196 16018268 ~ 16021643 (+)
cln6a cln6,LOC100690854 coding downstream 927709 16301781 ~ 16312679 (+)
G27459 NA non-coding upstream 296690 15062219 ~ 15065509 (+)
G27449 NA non-coding upstream 344694 15016584 ~ 15017505 (+)
LOC120556117 NA non-coding upstream 361912 14999704 ~ 15000287 (+)
G27432 NA non-coding upstream 404332 14957500 ~ 14957867 (+)
G27358 NA non-coding upstream 630553 14730817 ~ 14731646 (+)
G27565 rps17,LOC101480409,LOC100699764,LOC107389132 non-coding downstream 149902 15523974 ~ 15531915 (+)
G27566 NA non-coding downstream 159931 15534003 ~ 15535415 (+)
G27567 NA non-coding downstream 171419 15545491 ~ 15545779 (+)
G27568 NA non-coding downstream 172372 15546444 ~ 15546655 (+)
G27613 NA non-coding downstream 444536 15818608 ~ 15819369 (+)
LOC120556271 tmem138,LOC104922799,LOC102296598,LOC102204478,LOC104956289,LOC103368539,LOC102790175,LOC102222702 other upstream 308577 15047877 ~ 15053622 (+)
kcna4 kcna4 other upstream 397137 14889390 ~ 14965062 (+)
bbox1 bbox1,LOC102798250 other upstream 627023 14708562 ~ 14735176 (+)
lrrc4cb LOC104946080,LOC107396660,LOC103367510,LOC108234802,LOC101071141 other upstream 1505776 13809935 ~ 13856423 (+)
slc35c1 slc35c1 other upstream 1685586 13671477 ~ 13676613 (+)
LOC120556433 psma4,psa4,LOC106562664 other downstream 67383 15441455 ~ 15446492 (+)
LOC120556001 rbpms2,LOC107381790,LOC103368877,LOC104957780 other downstream 101075 15475147 ~ 15486451 (+)
LOC120555788 NA other downstream 2350473 17724545 ~ 17743448 (+)
LOC120556478 LOC103360749,LOC104942123,LOC102301404 other downstream 3187801 18561873 ~ 18575942 (+)
LOC120555697 NA other downstream 3700236 19074308 ~ 19087064 (+)

Expression


Co-expression Network