LOC120556067


Basic Information

Item Value
gene id LOC120556067
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 21674424 ~ 21681765 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039795433.1
GGCACTCACTCTcgttctccccccccccaagtgATTATAGGTTTAATGTGGAATTCCAATCTCTGATTAGTTAATTTACTGGTCAATATAAAGTAATAGATAAATAGGAACGACATAAGTCCATAGAAACGAAAAATGGAAAGAATATGACAACTGTAAACTACTGTCTACTTAGCGCAGGTTGCCCTAAGAAAGTATTTGTTGCAAcaaagcaacatttttacatttatgttttattcaGAGATGGTTTTTAGACTAGGTAAATCATGAATAtgtacattttgagaaataccCTAAATcctgaaaaaaattaataaattgcACTGCAGTAAAGTCCTCTATGCTAAAACATTCATGCCTCTATGCCCTGCGTTACCTCCCgtgactgtaaaaaaaagaaagagcctTCCTTGAGATATAAGTTCAAGGAAGGCTGTTGCATTTGCCGATTCGTTAATGAATTAATGCGTTTAGTTGTTCTGAACATGGAAGCATTCCTATGTGGCGTTTTTGGCCCTGGTAATGTAATtttcatagacagtatatggtAATTTTAGCCTGACGGCCTGTCAGGCGCTACTCCGGGTAAACTCACATGTCGTTTTACGCATGCGCATTGTGCGCTGAACCGTTCGAAGGCAGTAGCGCGAAAAAGTAGCTCGACTGTTAACTTGTCtaacagctagcgttagctagctagtttgcGATTTTATTTGCAAAGATGCGTAGCTACTACATTTGTGTCTTAACGTTATATAACTTGTTTTAGGTCTTAATGTGTACAACAAGAACGCTTCTGCTTATTGTTGCTTCACTAGTGTTGTCTTATTTAGCTACGTTAGTTTAACGTGAGCCACAACTTTAGCTACGTTAAAACATTGGGTTACATTAGCTACTTTATTGTTAACTAAGACGTTAGCAGATATGAAGCCAGCAAGAGGTTCTAACCGGGCCGCATCGAAAGAACCTAACttgaaaaacaagaaaaaaagagatgagaCGACGGAACAACAAGCGGCAGAGCATCAGGAGCCAGCGcccactgaaaaaaaacatggcaaGATCTCCCACCCAAAACCAGCACAGAAGAGGAAAGCTGAAGGCTCATCTTCGGTCCCAAGCAAAGTCAAAGGTGAGGACAAGTGGAAGCTGATGCCACGTTCCTCAATCACTGCTCTGGAGAACATAATGGACTTGTCAATACTAGCAACTCTTGCTTTGAGAccgaaagagaagaaagagagccAGGAACATCTGAACATAATGAAAACCAGgtttCTTGCTCAATGTGCAGCGCTCAAAGTTCCCGTGCAGAAACAAAATGATTTGGCGCAATCATCTCAGCGCCGCCAGGAGGAGGCCAAGAAGTCCGTGGTTGGAAAGACGACTCTGAGCACTCTGGAGGAAGACTTGAGGGCTGTGGTCCGTGCTCTGGAGAAAACCGATGAGCACACTGTCTCTTTACAGCACGCATCCAGCATGCTGAGAGaccaggtggaggaggaggacgagaaAGCTAAAGAGGTCTTACAGATAGCTGAACAAGCAGATCTCAACCTCCCCCCTCTACCTCCACAAAAAGATGAAACAACATTAGAGGCTCGATTGAGAAAAATTATACCAGACAGTGACTCTGAGACCGCTGCCCGGAAACTGGGAGAAATCCTGCAGCAACCAGAGGCCATTCAGGATGCCCAGGCGCTGCTGctacaggcacacagacacgccGATCAGCTCTTCAACCCGATCAGTGGTGCACCTTGTTCAGACGGGTACCTCACCAAATCTCTGCTTACAtaagtcttttttatttttaaaggaacacttaAAGAAGTTTGCAAGTGTGCACACATTTTTTGGAGCTTTGGTGTACAGGAAAATATTACTGCAATAACCTGCGATACCCATTTAGTGAAAACAATTGCAGCCACTATGTGAAGTATTAGAAAATGTCCAAATTTGGCGGCAACAATGgtagcaaaaaaaagaaaaagagagacactGGGGCAGACTGCAATCGTGGCTCTTCAAAactgaacttgttttggtggattaTTGCACCCTGCAAAATAAAACGCCCcacacaatattaaatgaagttaactgttcacacaatacagaaacgtgagctatttaaattagctggagaCATGGTTAAACGTCATTTGCTCTATCGCCGTGTGCATTTTGTCCATAGCAGATCCcagccaatcggtcccaaatggtcccagttagagagtaaattccgtaaacatattcttttgtaactctttacaatcattcccccgAAAGAACAAAGCAGggctgccttgttgcacgatccctttttccccccaaaatgggccattttcagcatgtaacGTTGCTCTGGTTCCGGTTAATGGTTAAAGGTTTCCTCGATACAACCGGAGTTTAAAGTAAACCCAAAGAAAGCGGGAagcgagggacatccggcgaacTACCGGCAGCGTCGGAACGATTTTGTAAATGAgccgtcgtcgatatagactatataCACCCTAACCATTCGGCTACCAGTGAGCCTTTTTCAACAGTGTGCTGCCCTCAGTATTTTAAAGCATTCTATTTTAGATgtaaattataattaaattgaCTGTTGCACAGTGTGGatgcatttgttgttgtttttttgttagaaAGTTAAGATATCCGACTTCTCTGTCGTCATTTGAGCCTAAATACCAGAACACAAACCACATTAAAGAAATACTATACTTGCAAATAAAGAATAAAGGTTTGTAAAACAATGA

Function

GO: NA

KEGG:

id description
K11509 CENPQ; centromere protein Q

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039795433.1 True 2771 mRNA 0.42 8 21674424 21681765

Neighbor

gene id symbol gene type direction distance location
mrpl16 mrpl16,LOC102799737 coding upstream 125 21668518 ~ 21674299 (+)
tgfbrap1 tgfbrap1 coding upstream 6707 21650745 ~ 21667717 (+)
grtp1a grtp1 coding upstream 47907 21614701 ~ 21626517 (+)
adprhl1 adprhl1,LOC102790835 coding upstream 61137 21605117 ~ 21613287 (+)
LOC120556135 tmem255b coding upstream 221121 21434259 ~ 21453303 (+)
LOC120555410 LOC102205483,LOC101478550,LOC103365221,LOC100711032,LOC102299296,LOC102798867 coding downstream 18038 21699803 ~ 21709381 (+)
LOC120555860 NA coding downstream 229641 21911406 ~ 21921876 (+)
lmo7b NA coding downstream 508131 22189896 ~ 22227106 (+)
cdh16 cdh16 coding downstream 687586 22369351 ~ 22407710 (+)
rrad rrad coding downstream 692369 22374134 ~ 22377140 (+)
G28880 cul4a non-coding upstream 36343 21636531 ~ 21638081 (+)
G28875 NA non-coding upstream 58266 21615716 ~ 21616158 (+)
G28812 NA non-coding upstream 217884 21357332 ~ 21456540 (+)
LOC120556583 NA non-coding upstream 261215 21409652 ~ 21413209 (+)
G28804 NA non-coding upstream 352799 21321312 ~ 21321625 (+)
G28976 NA non-coding downstream 36723 21718488 ~ 21718824 (+)
G28990 NA non-coding downstream 204824 21886589 ~ 21889549 (+)
G29004 NA non-coding downstream 402180 22083945 ~ 22084401 (+)
G29005 NA non-coding downstream 447199 22128964 ~ 22129578 (+)
LOC120556188 NA non-coding downstream 477805 22159570 ~ 22160895 (+)
dcun1d2b dcun1d2,LOC102792160 other upstream 70518 21596331 ~ 21603906 (+)
tpp2 tpp2 other upstream 111610 21525592 ~ 21562814 (+)
grk1a grk1 other upstream 241277 21421110 ~ 21433147 (+)
G28826 NA other upstream 270974 21396213 ~ 21403450 (+)
G28770 NA other upstream 913277 20711104 ~ 20761147 (+)
gpc5a gpc5,LOC103365231 other downstream 38269 21720034 ~ 21872025 (+)
ankrd11 ankrd11 other downstream 1082954 22764719 ~ 22895007 (+)
LOC120555548 LOC103365626,LOC104942698 other downstream 1300018 22981783 ~ 22994164 (+)
G29292 NA other downstream 1454967 23136732 ~ 23137027 (+)
igdcc3 igdcc3 other downstream 1761384 23443149 ~ 23517263 (+)

Expression


Co-expression Network