Gene
RNA
| Item | Value |
|---|---|
| gene id | mrpl16 |
| gene name | mrpl16,LOC102799737 |
| gene type | coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053114.1 |
| NCBI id | CM020911.1 |
| chromosome length | 46923577 |
| location | 21668518 ~ 21674299 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| symbol | description |
|---|---|
| mrpl16 | Predicted to enable rRNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in mitochondrial translation. Predicted to act upstream of or within translation. Predicted to be located in ribosome. Predicted to be part of mitochondrial large ribosomal subunit. Orthologous to human MRPL16 (mitochondrial ribosomal protein L16). |
| description |
|---|
| 39S ribosomal protein L16, mitochondrial |
| id | name | namespace |
|---|---|---|
| GO:0006412 | translation | biological_process |
| GO:0005840 | ribosome | cellular_component |
| GO:0019843 | rRNA binding | molecular_function |
| GO:0003735 | structural constituent of ribosome | molecular_function |
| id | description |
|---|---|
| K02878 | RP-L16, MRPL16, rplP; large subunit ribosomal protein L16 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_039795434.1 | True | 1304 | mRNA | 0.45 | 5 | 21668518 | 21674299 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tgfbrap1 | tgfbrap1 | coding | upstream | 801 | 21650745 ~ 21667717 (+) |
| grtp1a | grtp1 | coding | upstream | 42001 | 21614701 ~ 21626517 (+) |
| adprhl1 | adprhl1,LOC102790835 | coding | upstream | 55231 | 21605117 ~ 21613287 (+) |
| LOC120556135 | tmem255b | coding | upstream | 215215 | 21434259 ~ 21453303 (+) |
| ercc5 | ercc5,LOC104958986 | coding | upstream | 277971 | 21381209 ~ 21390547 (+) |
| LOC120556067 | NA | coding | downstream | 125 | 21674424 ~ 21681765 (+) |
| LOC120555410 | LOC102205483,LOC101478550,LOC103365221,LOC100711032,LOC102299296,LOC102798867 | coding | downstream | 25504 | 21699803 ~ 21709381 (+) |
| LOC120555860 | NA | coding | downstream | 237107 | 21911406 ~ 21921876 (+) |
| lmo7b | NA | coding | downstream | 515597 | 22189896 ~ 22227106 (+) |
| cdh16 | cdh16 | coding | downstream | 695052 | 22369351 ~ 22407710 (+) |
| G28880 | cul4a | non-coding | upstream | 30437 | 21636531 ~ 21638081 (+) |
| G28875 | NA | non-coding | upstream | 52360 | 21615716 ~ 21616158 (+) |
| G28812 | NA | non-coding | upstream | 211978 | 21357332 ~ 21456540 (+) |
| LOC120556583 | NA | non-coding | upstream | 255309 | 21409652 ~ 21413209 (+) |
| G28804 | NA | non-coding | upstream | 346893 | 21321312 ~ 21321625 (+) |
| G28976 | NA | non-coding | downstream | 44189 | 21718488 ~ 21718824 (+) |
| G28990 | NA | non-coding | downstream | 212290 | 21886589 ~ 21889549 (+) |
| G29004 | NA | non-coding | downstream | 409646 | 22083945 ~ 22084401 (+) |
| G29005 | NA | non-coding | downstream | 454665 | 22128964 ~ 22129578 (+) |
| LOC120556188 | NA | non-coding | downstream | 485271 | 22159570 ~ 22160895 (+) |
| dcun1d2b | dcun1d2,LOC102792160 | other | upstream | 64612 | 21596331 ~ 21603906 (+) |
| tpp2 | tpp2 | other | upstream | 105704 | 21525592 ~ 21562814 (+) |
| grk1a | grk1 | other | upstream | 235371 | 21421110 ~ 21433147 (+) |
| G28826 | NA | other | upstream | 265068 | 21396213 ~ 21403450 (+) |
| G28770 | NA | other | upstream | 907371 | 20711104 ~ 20761147 (+) |
| gpc5a | gpc5,LOC103365231 | other | downstream | 45735 | 21720034 ~ 21872025 (+) |
| ankrd11 | ankrd11 | other | downstream | 1090420 | 22764719 ~ 22895007 (+) |
| LOC120555548 | LOC103365626,LOC104942698 | other | downstream | 1307484 | 22981783 ~ 22994164 (+) |
| G29292 | NA | other | downstream | 1462433 | 23136732 ~ 23137027 (+) |
| igdcc3 | igdcc3 | other | downstream | 1768850 | 23443149 ~ 23517263 (+) |
